├── .gitignore ├── LICENSE ├── README.md ├── net-binary ├── Binary_Train_Noisy.ipynb ├── df_study_split_binary_negative_eb5ns_eb6eb6_ns_4024.csv └── readme.md ├── net-classification ├── augs │ ├── augs-00.json │ ├── augs-01.json │ ├── augs-02.json │ └── augs-04.json ├── configs │ ├── 00-v2m-PCAM-DANET-512.yaml │ ├── 01-v2m-PCAM-SAM-bin-study-noisy-512.yaml │ ├── 02-v2l-PCAM-SAM-noisy-512.yaml │ ├── 02a-v2l-PCAM-SAM-noisy-512-finetune.yaml │ ├── 03-v2m-PCAM-SAM-noisy-640.yaml │ ├── 04-b5-512.yaml │ ├── 04a-b5-512-noisy.yaml │ ├── 04b-b5-512-noisy-finetune.yaml │ ├── 05-b6-640.yaml │ ├── 05a-b7-640-noisy.yaml │ ├── 05b-b7-640-noisy-finetune.yaml │ ├── 06-v2l-PCAM-SAM-noisy-640.yaml │ ├── 07-v2l-PCAM-SAM-noisy-512.yaml │ ├── 08-v2l-PCAM-SAM-noisy-512.yaml │ ├── 08a-v2l-PCAM-SAM-noisy-finetune.yaml │ ├── 09-v2m-PCAM-SAM-1024.yaml │ └── 09a-v2m-PCAM-SAM-1024-noisy.yaml ├── data │ ├── .gitkeep │ ├── dataset_structure.txt │ └── train_stratified_group_5xfolds_clean.csv ├── generate_soft_labels.ipynb ├── readme.md ├── requirements.txt ├── runs │ └── .gitkeep ├── src │ ├── attn.py │ ├── dataset.py │ ├── defaults.py │ ├── lightning.py │ ├── models.py │ ├── solver.py │ └── utils.py └── train.py ├── net-det ├── coco_eval.py ├── coco_utils.py ├── configs │ ├── 00-d3-896.yaml │ ├── 01-d5-ema-512.yaml │ ├── 01a-d5-finetune-512.yaml │ ├── 02-d3-pseudo-ema-896.yaml │ └── 02a-d3-pseudo-finetune.yaml ├── data │ ├── dataset_structure.txt │ ├── grouped_df.csv │ └── grouped_df_with_pseudo_final.csv ├── effdet │ ├── __init__.py │ ├── anchors.py │ ├── bench.py │ ├── config │ │ ├── __init__.py │ │ ├── config_utils.py │ │ ├── fpn_config.py │ │ ├── model_config.py │ │ └── train_config.py │ ├── data │ │ ├── __init__.py │ │ ├── dataset.py │ │ ├── dataset_config.py │ │ ├── dataset_factory.py │ │ ├── input_config.py │ │ ├── loader.py │ │ ├── parsers │ │ │ ├── __init__.py │ │ │ ├── parser.py │ │ │ ├── parser_coco.py │ │ │ ├── parser_config.py │ │ │ ├── parser_factory.py │ │ │ ├── parser_open_images.py │ │ │ └── parser_voc.py │ │ ├── random_erasing.py │ │ └── transforms.py │ ├── distributed.py │ ├── efficientdet.py │ ├── evaluation │ │ ├── README.md │ │ ├── __init__.py │ │ ├── detection_evaluator.py │ │ ├── fields.py │ │ ├── metrics.py │ │ ├── np_box_list.py │ │ ├── np_mask_list.py │ │ ├── object_detection_evaluation.py │ │ └── per_image_evaluation.py │ ├── evaluator.py │ ├── factory.py │ ├── helpers.py │ ├── loss.py │ ├── object_detection │ │ ├── README.md │ │ ├── __init__.py │ │ ├── argmax_matcher.py │ │ ├── box_coder.py │ │ ├── box_list.py │ │ ├── matcher.py │ │ ├── region_similarity_calculator.py │ │ └── target_assigner.py │ ├── soft_nms.py │ └── version.py ├── nbs │ ├── d3_public_test.ipynb │ ├── d4_public_test.ipynb │ ├── gen-det-annotation.ipynb │ └── merge-wbf-yolov5-det.ipynb ├── readme.md ├── requirements.txt ├── runs │ └── .gitkeep ├── train.py ├── transforms.py └── utils.py ├── net-retinanet ├── data │ ├── .gitkeep │ └── dataset_structure.txt ├── example_logs │ ├── fold0 │ │ └── 20210803_181427.log.json │ ├── fold1 │ │ └── 20210803_215524.log.json │ ├── fold2 │ │ └── 20210804_013511.log.json │ ├── fold3 │ │ └── 20210804_051547.log.json │ └── fold4 │ │ └── 20210804_085806.log.json ├── readme.md ├── retinanet_x101_64x4d_fpn_siim_fold0.py ├── retinanet_x101_64x4d_fpn_siim_fold1.py ├── retinanet_x101_64x4d_fpn_siim_fold2.py ├── retinanet_x101_64x4d_fpn_siim_fold3.py ├── retinanet_x101_64x4d_fpn_siim_fold4.py ├── runs │ └── .gitkeep └── train.sh ├── net-yolov5 ├── LICENSE ├── data │ ├── dataset_structure.txt │ ├── hyps │ │ ├── params_stage1_model1.yaml │ │ ├── params_stage1_model2.yaml │ │ └── params_stage2.yaml │ ├── siim_data │ │ └── .gitkeep │ ├── siimcovid0-stage1.yaml │ ├── siimcovid0-stage2.yaml │ ├── siimcovid1-stage1.yaml │ ├── siimcovid1-stage2.yaml │ ├── siimcovid2-stage1.yaml │ ├── siimcovid2-stage2.yaml │ ├── siimcovid3-stage2.yaml │ ├── siimcovid3-stage3.yaml │ ├── siimcovid4-stage1.yaml │ └── siimcovid4-stage2.yaml ├── detect.py ├── models │ ├── __init__.py │ ├── common.py │ ├── experimental.py │ ├── hub │ │ ├── anchors.yaml │ │ ├── yolov3-spp.yaml │ │ ├── yolov3-tiny.yaml │ │ ├── yolov3.yaml │ │ ├── yolov5-bifpn.yaml │ │ ├── yolov5-fpn.yaml │ │ ├── yolov5-p2.yaml │ │ ├── yolov5-p6.yaml │ │ ├── yolov5-p7.yaml │ │ ├── yolov5-panet.yaml │ │ ├── yolov5l6.yaml │ │ ├── yolov5m6.yaml │ │ ├── yolov5s-transformer.yaml │ │ ├── yolov5s6.yaml │ │ └── yolov5x6.yaml │ ├── yolo.py │ ├── yolov5l.yaml │ ├── yolov5m.yaml │ ├── yolov5s.yaml │ └── yolov5x.yaml ├── psedo_public_test.ipynb ├── readme.md ├── requirements.txt ├── train.py ├── utils │ ├── __init__.py │ ├── activations.py │ ├── augmentations.py │ ├── autoanchor.py │ ├── aws │ │ ├── __init__.py │ │ ├── mime.sh │ │ ├── resume.py │ │ └── userdata.sh │ ├── datasets.py │ ├── downloads.py │ ├── flask_rest_api │ │ ├── README.md │ │ ├── example_request.py │ │ └── restapi.py │ ├── general.py │ ├── google_app_engine │ │ ├── Dockerfile │ │ ├── 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