├── .gitignore ├── .gitmodules ├── INSTRUCTIONS.md ├── INSTRUCTIONS_UBUNTU.md ├── InspectionTool.py ├── LICENSE.md ├── README.md ├── RegistrationShop.py ├── core ├── AppResources.py ├── AppVars.py ├── __init__.py ├── data │ ├── DataAnalyzer.py │ ├── DataController.py │ ├── DataReader.py │ ├── DataResizer.py │ ├── DataTransformer.py │ ├── DataWriter.py │ └── __init__.py ├── decorators.py ├── elastix │ ├── Elastix.py │ ├── ElastixCommand.py │ ├── Parameter.py │ ├── ParameterList.py │ ├── TransformixTransformation.py │ └── __init__.py ├── operations.py ├── project │ ├── Project.py │ ├── ProjectController.py │ └── __init__.py ├── strategy │ ├── Strategy.py │ ├── StrategyEdge.py │ ├── StrategyNode.py │ └── __init__.py ├── vtkDrawing.py ├── vtkObjectWrapper.py └── worker │ ├── Command.py │ ├── Operator.py │ ├── Worker.py │ └── __init__.py ├── environment.yml ├── recipes └── vtk-multivolren │ ├── bld.bat │ ├── build.sh │ ├── conda_build_config.yaml │ └── meta.yaml ├── resources ├── data │ ├── Block1.mhd │ ├── Block1.zraw │ ├── Block2.mhd │ └── Block2.zraw ├── images │ ├── AddButton.png │ ├── ButtonBackground.png │ ├── CompareButton.png │ ├── DeformableTransformButton.png │ ├── HelpButton.png │ ├── LandmarkTransformButton.png │ ├── RemoveButton.png │ ├── ToolbarBottom.png │ ├── ToolbarLeft.png │ ├── ToolbarRight.png │ └── UserTransformButton.png └── transformations │ ├── Default Affine.txt │ ├── Default Deformable.txt │ ├── Default Rigid.txt │ └── Default Translation.txt ├── tests ├── __init__.py ├── data │ ├── DICOM │ │ ├── IM-0027-0001.dcm │ │ ├── IM-0027-0002.dcm │ │ ├── IM-0027-0003.dcm │ │ ├── IM-0027-0004.dcm │ │ ├── IM-0027-0005.dcm │ │ ├── IM-0027-0006.dcm │ │ ├── IM-0027-0007.dcm │ │ ├── IM-0027-0008.dcm │ │ ├── IM-0027-0009.dcm │ │ ├── IM-0027-0010.dcm │ │ └── IM-0027-0011.dcm │ ├── Sample.txt │ ├── hi-3.mhd │ ├── hi-3.zraw │ ├── hi-5.mhd │ ├── hi-5.zraw │ └── modelSegmentation.vti ├── test_Command.py ├── test_DataReader.py ├── test_DataWriter.py ├── test_Elastix.py ├── test_ElastixCommand.py ├── test_ImageDataResizer.py ├── test_Operations.py ├── test_Operator.py ├── test_Parameter.py ├── test_ParameterList.py ├── test_Project.py ├── test_ProjectController.py ├── test_Strategy.py ├── test_StrategyEdge.py ├── test_StrategyNode.py ├── test_TransformationList.py ├── test_VolumeProperty.py └── test_Worker.py └── ui ├── Interactor.py ├── MainWindow.py ├── MultiRenderController.py ├── QVTKRenderWindowInteractor.py ├── RenderController.py ├── WindowDialog.py ├── __init__.py ├── dialogs ├── ElastixMainDialog.py ├── ExportProgressDialog.py ├── FileTypeDialog.py ├── PickerTypeDialog.py ├── ResetVisualizationDialog.py └── __init__.py ├── parameters ├── RenderInfoWidget.py ├── RenderParameterWidget.py ├── RenderSlicerParamWidget.py ├── TransformationHistoryWidget.py ├── TransformationParameterWidget.py └── __init__.py ├── transformations ├── ClippingBox.py ├── DeformableTransformationTool.py ├── Landmark.py ├── LandmarkTransformationTool.py ├── ParameterListView.py ├── ParameterModel.py ├── ParameterWidget.py ├── Picker.py ├── SurfacePicker.py ├── TransformBox.py ├── Transformation.py ├── TransformationList.py ├── TransformationListView.py ├── TransformationModel.py ├── TransformationTool.py ├── TwoStepPicker.py ├── UserTransformationTool.py └── __init__.py ├── visualizations ├── MultiVolumeVisualization.py ├── MultiVolumeVisualizationFactory.py ├── MultiVolumeVisualizationMIDA.py ├── MultiVolumeVisualizationMIP.py ├── MultiVolumeVisualizationMix.py ├── VolumeVisualization.py ├── VolumeVisualizationCT.py ├── VolumeVisualizationFactory.py ├── VolumeVisualizationMIDA.py ├── VolumeVisualizationMIP.py ├── VolumeVisualizationRamp.py ├── VolumeVisualizationSimple.py ├── VolumeVisualizationTransferFunction.py ├── VolumeVisualizationWrapper.py └── __init__.py └── widgets ├── ButtonContainerWidget.py ├── ColorWidget.py ├── LandmarkWidget.py ├── MultiRenderPropWidget.py ├── MultiRenderWidget.py ├── PointsWidget.py ├── RenderPropWidget.py ├── RenderWidget.py ├── SliceCompareViewerWidget.py ├── SliceViewerWidget.py ├── SliderFloatWidget.py ├── SliderWidget.py ├── StatusWidget.py ├── Style.py ├── TitleWidget.py ├── ToolbarWidget.py ├── __init__.py ├── histogram ├── BackgroundItem.py ├── GridItem.py ├── Histogram.py ├── HistogramItem.py ├── HistogramWidget.py ├── NodeItem.py ├── TrackingHistogramWidget.py ├── TrackingNodeItem.py └── __init__.py └── transferfunction ├── TransferFunction.py ├── TransferFunctionItem.py ├── TransferFunctionNodeItem.py ├── TransferFunctionWidget.py └── __init__.py /.gitignore: -------------------------------------------------------------------------------- 1 | # Python byte code 2 | *.pyc 3 | 4 | # OS X stuff 5 | .DS_Store 6 | 7 | -------------------------------------------------------------------------------- /.gitmodules: -------------------------------------------------------------------------------- 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