├── README.md ├── Readme_WES.pdf └── Script ├── BWA_DeepVariant.sh ├── BWA_Freebayes.sh ├── BWA_Gatk.sh ├── BWA_Samtools.sh ├── Bowtie_DeepVariant.sh ├── Bowtie_Freebayes.sh ├── Bowtie_Gatk.sh ├── Bowtie_Samtools.sh ├── Mosaik_DeepVariant.sh ├── Mosaik_Freebayes.sh ├── Mosaik_Gatk.sh ├── Mosaik_Samtools.sh ├── Novoalign_DeepVariant.sh ├── Novoalign_Freebayes.sh ├── Novoalign_Gatk.sh ├── Novoalign_Samtools.sh ├── Soap_DeepVariant.sh ├── Soap_Freebayes.sh ├── Soap_Gatk.sh └── Soap_Samtools.sh /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/bharani-lab/WES-Benchmarking-Pipeline_Manoj/HEAD/README.md -------------------------------------------------------------------------------- /Readme_WES.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/bharani-lab/WES-Benchmarking-Pipeline_Manoj/HEAD/Readme_WES.pdf 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