├── .dockerignore ├── .gitignore ├── LICENSE ├── README.md ├── config ├── biocypher_config.yaml ├── biocypher_docker_config.yaml └── schema_config.yaml ├── create_knowledge_graph.py ├── docker-compose.yml ├── docker-variables.env ├── docker ├── biocypher_entrypoint_patch.sh ├── create_table.sh └── import.sh ├── poetry.lock ├── pyproject.toml ├── scripts ├── build.sh └── import.sh ├── template_package ├── __init__.py └── adapters │ ├── __init__.py │ └── example_adapter.py └── uv.lock /.dockerignore: -------------------------------------------------------------------------------- 1 | __pycache__ 2 | .venv 3 | .vscode 4 | .git 5 | biocypher-* 6 | -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/biocypher/project-template/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: 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