├── .readthedocs.yml ├── LICENSE ├── MANIFEST.in ├── README.md ├── SEVtras ├── __init__.py ├── _docs.py ├── env.py ├── evs.gmt ├── evsM.gmt ├── functional.py ├── id_homo_rna_ev ├── id_mus_rna_ev ├── main.py ├── sc_pp.py ├── sc_readwrite.py ├── sc_utils.py ├── utils.py └── version.py ├── docs ├── Functions.rst ├── Installation.rst ├── Overview.rst ├── Part I sEVs recognizing.rst ├── Part II ESAI calculating.rst ├── Part1.png ├── Part2.png ├── SEVtras_overview.png ├── Troubleshooting.rst ├── conf.py ├── index.rst └── requirements.txt ├── setup.py └── tests ├── sEV_SEVtras.h5ad ├── sample_file ├── test1.h5ad ├── test2.h5ad └── test_cell.h5ad /.readthedocs.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/bioinfo-biols/SEVtras/HEAD/.readthedocs.yml -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- 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