├── .conda ├── conda_build_config.yaml └── meta.yaml ├── .gitignore ├── .gitlab-ci.yml ├── .travis.yml ├── ABXpy ├── __init__.py ├── analyze.py ├── database │ ├── __init__.py │ └── database.py ├── dbfun │ ├── __init__.py │ ├── dbfun.py │ ├── dbfun_column.py │ ├── dbfun_compute.py │ ├── dbfun_lookuptable.py │ └── lookuptable_connector.py ├── distance.py ├── distances │ ├── __init__.py │ ├── distances.py │ ├── example_distances.py │ └── metrics │ │ ├── __init__.py │ │ ├── cosine.py │ │ ├── dtw │ │ └── dtw.pyx │ │ ├── kullback_leibler.py │ │ └── utw.py ├── h5tools │ ├── __init__.py │ ├── h52np.py │ ├── h5_handler.py │ ├── h5io.py │ └── np2h5.py ├── misc │ ├── __init__.py │ ├── any2h5features.py │ ├── items.py │ ├── progress_display.py │ ├── tinytree.py │ └── type_fitting.py ├── sampling │ ├── __init__.py │ └── sampler.py ├── score.py ├── sideop │ ├── __init__.py │ ├── filter_manager.py │ ├── regressor_manager.py │ └── side_operations_manager.py ├── task.py └── verify.py ├── CHANGELOG.rst ├── CONTRIBUTING.rst ├── LICENSE.txt ├── Makefile ├── README.rst ├── bin └── ABXrun.py ├── doc ├── ABXpy.database.rst ├── ABXpy.dbfun.rst ├── ABXpy.distances.metrics.rst ├── ABXpy.distances.rst ├── ABXpy.h5tools.rst ├── ABXpy.misc.rst ├── ABXpy.rst ├── ABXpy.sampling.rst ├── ABXpy.sideop.rst ├── FilesFormat.rst ├── Makefile ├── NumberOfCores.rst ├── _templates │ └── footer.html ├── conf.py ├── index.rst ├── make.bat └── readthedocs-pip-requirements.txt ├── environment.yml ├── examples ├── complete_run.py ├── complete_run.sh └── example_items │ ├── data.features │ └── data.item ├── setup.cfg ├── setup.py └── test ├── frozen_files ├── data.abx ├── data.csv ├── data.distance ├── data.features ├── data.item └── data.score ├── test_analyse.py ├── test_dtw.py ├── test_examples.py ├── test_sampling.py ├── test_score.py └── test_task.py /.conda/conda_build_config.yaml: -------------------------------------------------------------------------------- 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