├── .gitignore ├── About.png ├── CoverArt.png ├── README.md ├── README.pdf ├── ReleaseNotes.md ├── ReleaseNotes.pdf ├── bd.m ├── bdControl.m ├── bdControlJButton.m ├── bdControlMatrix.m ├── bdControlMatrixDialog.m ├── bdControlScalar.m ├── bdControlScalarDialog.m ├── bdControlTime.m ├── bdControlVector.m ├── bdControlVectorDialog.m ├── bdDisplay.m ├── bdEditMatrix.m ├── bdEditScalars.m ├── bdEditVector.m ├── bdEval.m ├── bdEvolve.m ├── bdGUI.m ├── bdGetLag.m ├── bdGetPar.m ├── bdGetValue.m ├── bdGetValues.m ├── bdGetVar.m ├── bdPanel.m ├── bdScroll.m ├── bdSetLag.m ├── bdSetPar.m ├── bdSetValue.m ├── bdSetValues.m ├── bdSetVar.m ├── bdSolve.m ├── bdSysCheck.m ├── models ├── BOLDHRF.m ├── BOLDHRF.mat ├── BTF2003.m ├── BTF2003.mat ├── BTF2003DDE.m ├── BTF2003DDE.mat ├── BTF2003SDE.m ├── BTF2003SDE.mat ├── BrownianMotion.m ├── BrownianMotion.mat ├── DFCL2009.m ├── DFCL2009.mat ├── EI0D.m ├── EI1D.m ├── EIE0D.m ├── EIE1D.m ├── Epileptor2014ODE.m ├── Epileptor2014ODE.mat ├── Epileptor2014SDE.m ├── Epileptor2014SDE.mat ├── FRRB2012.m ├── FRRB2012.mat ├── FRRB2012b.m ├── FRRB2012b.mat ├── FisherKolmogorov1D.m ├── FisherKolmogorov1D.mat ├── FitzhughNagumo.m ├── FitzhughNagumo.mat ├── HindmarshRose.m ├── HindmarshRose.mat ├── HodgkinHuxley.m ├── HodgkinHuxley.mat ├── HopfXY.m ├── HopfieldNet.m ├── HopfieldNet.mat ├── KloedenPlaten446.m ├── KloedenPlaten446.mat ├── KuramotoNet.m ├── KuramotoNet.mat ├── KuramotoSakaguchi.m ├── KuramotoSakaguchi.mat ├── LinearODE.m ├── LinearODE.mat ├── LinearODEdemo1.m ├── Lorenz.m ├── Lorenz.mat ├── MorrisLecar.m ├── MorrisLecar1D.m ├── MorrisLecar1D.mat ├── MorrisLecarHomoclinic.mat ├── MorrisLecarHopf.mat ├── MorrisLecarSNLC.mat ├── OrnsteinUhlenbeck.m ├── OrnsteinUhlenbeck.mat ├── Othmer1997.m ├── Pendulum.m ├── Pospischil2008.m ├── Pospischil2008FS.mat ├── Pospischil2008IB.mat ├── Pospischil2008RS.mat ├── RFB2017.m ├── RFB2017.mat ├── SwiftHohenberg1D.m ├── SwiftHohenberg1D.mat ├── Tsodyks1997.m ├── Tsodyks1997Fig4A.mat ├── Tsodyks1997Fig4B.mat ├── VanDerPolOscillators.m ├── VanDerPolOscillators.mat ├── WaveEquation1D.m ├── WaveEquation1D.mat ├── WaveEquation2D.m ├── WaveEquation2D.mat ├── WilleBakerEx3.m ├── WilleBakerEx3.mat ├── WilsonCowan.m ├── WilsonCowan.mat ├── WilsonCowanNet.m ├── WilsonCowanNet.mat ├── WilsonCowanRing.m ├── WilsonCowanRing.mat ├── cocomac047.mat └── cocomac242.mat ├── panels ├── bdAuxiliary.m ├── bdBifurcation.m ├── bdBoldHRF.m ├── bdCorrPanel.m ├── bdHilbert.m ├── bdLatexPanel.m ├── bdPhasePortrait.m ├── bdSolverPanel.m ├── bdSpace2D.m ├── bdSpaceTime.m ├── bdSurrogate.m ├── bdTimePortrait.m └── bdTrapPanel.m ├── solvers ├── dde23a.m ├── odeEul.m ├── sdeEM.m └── sdeSH.m └── testcode ├── HilbertDemoA.m ├── HilbertDemoB.m ├── HilbertTest.m ├── checkModels.m └── testdata1.mat /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/.gitignore -------------------------------------------------------------------------------- /About.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/About.png -------------------------------------------------------------------------------- /CoverArt.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/CoverArt.png -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/README.md -------------------------------------------------------------------------------- /README.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/README.pdf -------------------------------------------------------------------------------- /ReleaseNotes.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/ReleaseNotes.md -------------------------------------------------------------------------------- /ReleaseNotes.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/ReleaseNotes.pdf -------------------------------------------------------------------------------- /bd.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bd.m -------------------------------------------------------------------------------- /bdControl.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdControl.m -------------------------------------------------------------------------------- /bdControlJButton.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdControlJButton.m -------------------------------------------------------------------------------- /bdControlMatrix.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdControlMatrix.m -------------------------------------------------------------------------------- /bdControlMatrixDialog.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdControlMatrixDialog.m -------------------------------------------------------------------------------- /bdControlScalar.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdControlScalar.m -------------------------------------------------------------------------------- /bdControlScalarDialog.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdControlScalarDialog.m -------------------------------------------------------------------------------- /bdControlTime.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdControlTime.m -------------------------------------------------------------------------------- /bdControlVector.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdControlVector.m -------------------------------------------------------------------------------- /bdControlVectorDialog.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdControlVectorDialog.m -------------------------------------------------------------------------------- /bdDisplay.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdDisplay.m -------------------------------------------------------------------------------- /bdEditMatrix.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdEditMatrix.m -------------------------------------------------------------------------------- /bdEditScalars.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdEditScalars.m -------------------------------------------------------------------------------- /bdEditVector.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdEditVector.m -------------------------------------------------------------------------------- /bdEval.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdEval.m -------------------------------------------------------------------------------- /bdEvolve.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdEvolve.m -------------------------------------------------------------------------------- /bdGUI.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdGUI.m -------------------------------------------------------------------------------- /bdGetLag.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdGetLag.m -------------------------------------------------------------------------------- /bdGetPar.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdGetPar.m -------------------------------------------------------------------------------- /bdGetValue.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdGetValue.m -------------------------------------------------------------------------------- /bdGetValues.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdGetValues.m -------------------------------------------------------------------------------- /bdGetVar.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdGetVar.m -------------------------------------------------------------------------------- /bdPanel.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdPanel.m -------------------------------------------------------------------------------- /bdScroll.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdScroll.m -------------------------------------------------------------------------------- /bdSetLag.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdSetLag.m -------------------------------------------------------------------------------- /bdSetPar.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdSetPar.m -------------------------------------------------------------------------------- /bdSetValue.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdSetValue.m -------------------------------------------------------------------------------- /bdSetValues.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdSetValues.m -------------------------------------------------------------------------------- /bdSetVar.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdSetVar.m -------------------------------------------------------------------------------- /bdSolve.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdSolve.m -------------------------------------------------------------------------------- /bdSysCheck.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/bdSysCheck.m -------------------------------------------------------------------------------- /models/BOLDHRF.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BOLDHRF.m -------------------------------------------------------------------------------- /models/BOLDHRF.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BOLDHRF.mat -------------------------------------------------------------------------------- /models/BTF2003.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BTF2003.m -------------------------------------------------------------------------------- /models/BTF2003.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BTF2003.mat -------------------------------------------------------------------------------- /models/BTF2003DDE.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BTF2003DDE.m -------------------------------------------------------------------------------- /models/BTF2003DDE.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BTF2003DDE.mat -------------------------------------------------------------------------------- /models/BTF2003SDE.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BTF2003SDE.m -------------------------------------------------------------------------------- /models/BTF2003SDE.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BTF2003SDE.mat -------------------------------------------------------------------------------- /models/BrownianMotion.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BrownianMotion.m -------------------------------------------------------------------------------- /models/BrownianMotion.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/BrownianMotion.mat -------------------------------------------------------------------------------- /models/DFCL2009.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/DFCL2009.m -------------------------------------------------------------------------------- /models/DFCL2009.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/DFCL2009.mat -------------------------------------------------------------------------------- /models/EI0D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/EI0D.m -------------------------------------------------------------------------------- /models/EI1D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/EI1D.m -------------------------------------------------------------------------------- /models/EIE0D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/EIE0D.m -------------------------------------------------------------------------------- /models/EIE1D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/EIE1D.m -------------------------------------------------------------------------------- /models/Epileptor2014ODE.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Epileptor2014ODE.m -------------------------------------------------------------------------------- /models/Epileptor2014ODE.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Epileptor2014ODE.mat -------------------------------------------------------------------------------- /models/Epileptor2014SDE.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Epileptor2014SDE.m -------------------------------------------------------------------------------- /models/Epileptor2014SDE.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Epileptor2014SDE.mat -------------------------------------------------------------------------------- /models/FRRB2012.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/FRRB2012.m -------------------------------------------------------------------------------- /models/FRRB2012.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/FRRB2012.mat -------------------------------------------------------------------------------- /models/FRRB2012b.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/FRRB2012b.m -------------------------------------------------------------------------------- /models/FRRB2012b.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/FRRB2012b.mat -------------------------------------------------------------------------------- /models/FisherKolmogorov1D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/FisherKolmogorov1D.m -------------------------------------------------------------------------------- /models/FisherKolmogorov1D.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/FisherKolmogorov1D.mat -------------------------------------------------------------------------------- /models/FitzhughNagumo.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/FitzhughNagumo.m -------------------------------------------------------------------------------- /models/FitzhughNagumo.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/FitzhughNagumo.mat -------------------------------------------------------------------------------- /models/HindmarshRose.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/HindmarshRose.m -------------------------------------------------------------------------------- /models/HindmarshRose.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/HindmarshRose.mat -------------------------------------------------------------------------------- /models/HodgkinHuxley.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/HodgkinHuxley.m -------------------------------------------------------------------------------- /models/HodgkinHuxley.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/HodgkinHuxley.mat -------------------------------------------------------------------------------- /models/HopfXY.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/HopfXY.m -------------------------------------------------------------------------------- /models/HopfieldNet.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/HopfieldNet.m -------------------------------------------------------------------------------- /models/HopfieldNet.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/HopfieldNet.mat -------------------------------------------------------------------------------- /models/KloedenPlaten446.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/KloedenPlaten446.m -------------------------------------------------------------------------------- /models/KloedenPlaten446.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/KloedenPlaten446.mat -------------------------------------------------------------------------------- /models/KuramotoNet.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/KuramotoNet.m -------------------------------------------------------------------------------- /models/KuramotoNet.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/KuramotoNet.mat -------------------------------------------------------------------------------- /models/KuramotoSakaguchi.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/KuramotoSakaguchi.m -------------------------------------------------------------------------------- /models/KuramotoSakaguchi.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/KuramotoSakaguchi.mat -------------------------------------------------------------------------------- /models/LinearODE.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/LinearODE.m -------------------------------------------------------------------------------- /models/LinearODE.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/LinearODE.mat -------------------------------------------------------------------------------- /models/LinearODEdemo1.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/LinearODEdemo1.m -------------------------------------------------------------------------------- /models/Lorenz.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Lorenz.m -------------------------------------------------------------------------------- /models/Lorenz.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Lorenz.mat -------------------------------------------------------------------------------- /models/MorrisLecar.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/MorrisLecar.m -------------------------------------------------------------------------------- /models/MorrisLecar1D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/MorrisLecar1D.m -------------------------------------------------------------------------------- /models/MorrisLecar1D.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/MorrisLecar1D.mat -------------------------------------------------------------------------------- /models/MorrisLecarHomoclinic.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/MorrisLecarHomoclinic.mat -------------------------------------------------------------------------------- /models/MorrisLecarHopf.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/MorrisLecarHopf.mat -------------------------------------------------------------------------------- /models/MorrisLecarSNLC.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/MorrisLecarSNLC.mat -------------------------------------------------------------------------------- /models/OrnsteinUhlenbeck.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/OrnsteinUhlenbeck.m -------------------------------------------------------------------------------- /models/OrnsteinUhlenbeck.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/OrnsteinUhlenbeck.mat -------------------------------------------------------------------------------- /models/Othmer1997.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Othmer1997.m -------------------------------------------------------------------------------- /models/Pendulum.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Pendulum.m -------------------------------------------------------------------------------- /models/Pospischil2008.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Pospischil2008.m -------------------------------------------------------------------------------- /models/Pospischil2008FS.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Pospischil2008FS.mat -------------------------------------------------------------------------------- /models/Pospischil2008IB.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Pospischil2008IB.mat -------------------------------------------------------------------------------- /models/Pospischil2008RS.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Pospischil2008RS.mat -------------------------------------------------------------------------------- /models/RFB2017.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/RFB2017.m -------------------------------------------------------------------------------- /models/RFB2017.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/RFB2017.mat -------------------------------------------------------------------------------- /models/SwiftHohenberg1D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/SwiftHohenberg1D.m -------------------------------------------------------------------------------- /models/SwiftHohenberg1D.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/SwiftHohenberg1D.mat -------------------------------------------------------------------------------- /models/Tsodyks1997.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Tsodyks1997.m -------------------------------------------------------------------------------- /models/Tsodyks1997Fig4A.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Tsodyks1997Fig4A.mat -------------------------------------------------------------------------------- /models/Tsodyks1997Fig4B.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/Tsodyks1997Fig4B.mat -------------------------------------------------------------------------------- /models/VanDerPolOscillators.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/VanDerPolOscillators.m -------------------------------------------------------------------------------- /models/VanDerPolOscillators.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/VanDerPolOscillators.mat -------------------------------------------------------------------------------- /models/WaveEquation1D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WaveEquation1D.m -------------------------------------------------------------------------------- /models/WaveEquation1D.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WaveEquation1D.mat -------------------------------------------------------------------------------- /models/WaveEquation2D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WaveEquation2D.m -------------------------------------------------------------------------------- /models/WaveEquation2D.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WaveEquation2D.mat -------------------------------------------------------------------------------- /models/WilleBakerEx3.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WilleBakerEx3.m -------------------------------------------------------------------------------- /models/WilleBakerEx3.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WilleBakerEx3.mat -------------------------------------------------------------------------------- /models/WilsonCowan.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WilsonCowan.m -------------------------------------------------------------------------------- /models/WilsonCowan.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WilsonCowan.mat -------------------------------------------------------------------------------- /models/WilsonCowanNet.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WilsonCowanNet.m -------------------------------------------------------------------------------- /models/WilsonCowanNet.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WilsonCowanNet.mat -------------------------------------------------------------------------------- /models/WilsonCowanRing.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WilsonCowanRing.m -------------------------------------------------------------------------------- /models/WilsonCowanRing.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/WilsonCowanRing.mat -------------------------------------------------------------------------------- /models/cocomac047.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/cocomac047.mat -------------------------------------------------------------------------------- /models/cocomac242.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/models/cocomac242.mat -------------------------------------------------------------------------------- /panels/bdAuxiliary.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdAuxiliary.m -------------------------------------------------------------------------------- /panels/bdBifurcation.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdBifurcation.m -------------------------------------------------------------------------------- /panels/bdBoldHRF.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdBoldHRF.m -------------------------------------------------------------------------------- /panels/bdCorrPanel.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdCorrPanel.m -------------------------------------------------------------------------------- /panels/bdHilbert.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdHilbert.m -------------------------------------------------------------------------------- /panels/bdLatexPanel.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdLatexPanel.m -------------------------------------------------------------------------------- /panels/bdPhasePortrait.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdPhasePortrait.m -------------------------------------------------------------------------------- /panels/bdSolverPanel.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdSolverPanel.m -------------------------------------------------------------------------------- /panels/bdSpace2D.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdSpace2D.m -------------------------------------------------------------------------------- /panels/bdSpaceTime.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdSpaceTime.m -------------------------------------------------------------------------------- /panels/bdSurrogate.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdSurrogate.m -------------------------------------------------------------------------------- /panels/bdTimePortrait.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdTimePortrait.m -------------------------------------------------------------------------------- /panels/bdTrapPanel.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/panels/bdTrapPanel.m -------------------------------------------------------------------------------- /solvers/dde23a.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/solvers/dde23a.m -------------------------------------------------------------------------------- /solvers/odeEul.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/solvers/odeEul.m -------------------------------------------------------------------------------- /solvers/sdeEM.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/solvers/sdeEM.m -------------------------------------------------------------------------------- /solvers/sdeSH.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/solvers/sdeSH.m -------------------------------------------------------------------------------- /testcode/HilbertDemoA.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/testcode/HilbertDemoA.m -------------------------------------------------------------------------------- /testcode/HilbertDemoB.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/testcode/HilbertDemoB.m -------------------------------------------------------------------------------- /testcode/HilbertTest.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/testcode/HilbertTest.m -------------------------------------------------------------------------------- /testcode/checkModels.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/testcode/checkModels.m -------------------------------------------------------------------------------- /testcode/testdata1.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/breakspear/bdtoolkit/HEAD/testcode/testdata1.mat --------------------------------------------------------------------------------