├── .gitignore ├── LICENSE ├── README.md ├── check_for_new_cases.py ├── docker ├── Dockerfile ├── Makefile └── sha256.txt ├── docs └── SMA_poster_SVAR22.png ├── plot_SMN1_SMN2_scatter.py ├── requirements.txt ├── setup.py ├── sma_finder.py ├── sma_finder_hail_batch_pipeline.py └── sma_finder_wdl_pipeline.wdl /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/README.md -------------------------------------------------------------------------------- /check_for_new_cases.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/check_for_new_cases.py -------------------------------------------------------------------------------- /docker/Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/docker/Dockerfile -------------------------------------------------------------------------------- /docker/Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/docker/Makefile -------------------------------------------------------------------------------- /docker/sha256.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/docker/sha256.txt -------------------------------------------------------------------------------- /docs/SMA_poster_SVAR22.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/docs/SMA_poster_SVAR22.png -------------------------------------------------------------------------------- /plot_SMN1_SMN2_scatter.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/plot_SMN1_SMN2_scatter.py -------------------------------------------------------------------------------- /requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/requirements.txt -------------------------------------------------------------------------------- /setup.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/setup.py -------------------------------------------------------------------------------- /sma_finder.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/sma_finder.py -------------------------------------------------------------------------------- /sma_finder_hail_batch_pipeline.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/sma_finder_hail_batch_pipeline.py -------------------------------------------------------------------------------- /sma_finder_wdl_pipeline.wdl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/broadinstitute/sma-finder/HEAD/sma_finder_wdl_pipeline.wdl --------------------------------------------------------------------------------