├── .gitignore ├── .travis.yml ├── LICENSE ├── README.md ├── examples ├── cpp │ ├── alg_comparison.py │ ├── alg_comparison_2d.py │ ├── simplicial_complex.py │ └── time_levelset.py ├── generator │ ├── examples.py │ └── generator-32000.pt ├── levelset │ ├── noisy_circle.png │ └── noisy_circle.py ├── paper │ ├── README.md │ ├── pointcloud │ │ ├── README.md │ │ └── alpha.py │ └── regression │ │ ├── .gitignore │ │ ├── alpha.py │ │ ├── levelset.py │ │ ├── penalties.py │ │ ├── problems.py │ │ ├── rips.py │ │ └── util.py └── pointcloud │ ├── holes.png │ └── holes.py ├── requirements.txt ├── setup.py ├── tests ├── README.md ├── cpp │ ├── __init__.py │ └── simplicial_complex.py └── nn │ ├── __init__.py │ ├── alpha.py │ ├── levelset.py │ └── rips.py └── topologylayer ├── __init__.py ├── functional ├── __init__.py ├── alpha_dionysus.py ├── flag.py ├── levelset_dionysus.py ├── persistence │ ├── cocycle.cpp │ ├── cocycle.h │ ├── cohom.cpp │ ├── cohom.h │ ├── complex.cpp │ ├── complex.h │ ├── hom.cpp │ ├── hom.h │ ├── interval.h │ ├── pybind.cpp │ └── sparsevec.h ├── rips_dionysus.py ├── sublevel.py └── utils_dionysus.py ├── nn ├── __init__.py ├── alpha.py ├── alpha_dionysus.py ├── features.py ├── levelset.py ├── levelset_dionysus.py ├── rips.py └── rips_dionysus.py └── util ├── __init__.py ├── construction.py ├── flag_dionysus.py ├── plot_dionysus.py ├── process.py └── star_dionysus.py /.gitignore: -------------------------------------------------------------------------------- 1 | *.pyc 2 | *.png 3 | *.DS_Store 4 | files.txt 5 | build/ 6 | dist/ 7 | topologylayer.egg-info/ 8 | -------------------------------------------------------------------------------- /.travis.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/bruel-gabrielsson/TopologyLayer/HEAD/.travis.yml -------------------------------------------------------------------------------- /LICENSE: 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