├── Automating eICU ├── __pycache__ │ ├── antibiotics.cpython-37.pyc │ └── gcs_extract.cpython-37.pyc ├── antibiotics.py ├── gcs_extract.py ├── labs_extract.py ├── main.py ├── merge_final_table.py ├── sepsis_calc.py ├── sepsisprediction.py └── vasopressor_extract.py ├── Jupyter Notebooks ├── .ipynb_checkpoints │ ├── Apache Analysis-checkpoint.ipynb │ ├── Cardiovascular param-checkpoint.ipynb │ ├── Final Table Build-checkpoint.ipynb │ ├── Final t_sepsis-checkpoint.ipynb │ ├── GCS Scores table and Labs Before FiO2-checkpoint.ipynb │ ├── General-checkpoint.ipynb │ ├── Labs ready-checkpoint.ipynb │ ├── Model Training-checkpoint.ipynb │ ├── SepsisPrediction-checkpoint.ipynb │ ├── Simple Sepsis EDA using ICD9-checkpoint.ipynb │ ├── Training Table-checkpoint.ipynb │ ├── eICU Eval-checkpoint.ipynb │ ├── sepsis control case analysis-checkpoint.ipynb │ └── t_sus-checkpoint.ipynb ├── Apache Analysis.ipynb ├── Cardiovascular param.ipynb ├── Final Table Build.ipynb ├── Final t_sepsis.ipynb ├── GCS Scores table and Labs Before FiO2.ipynb ├── General.ipynb ├── Joining all tables.ipynb ├── Labs ready.ipynb ├── Model Training.ipynb ├── SepsisPrediction.ipynb ├── Simple Sepsis EDA using ICD9.ipynb ├── Training Table.ipynb ├── eICU Eval.ipynb ├── sepsis control case analysis.ipynb ├── t_sepsis_onset_akram.ipynb └── t_sus.ipynb ├── LICENSE ├── README.md ├── SOFA_CALC.png ├── auroc.png ├── other-models-comparison.PNG └── xgboost-results.PNG /Automating eICU/__pycache__/antibiotics.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cbmi-uthsc/sepsisPrediction/HEAD/Automating eICU/__pycache__/antibiotics.cpython-37.pyc -------------------------------------------------------------------------------- /Automating eICU/__pycache__/gcs_extract.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cbmi-uthsc/sepsisPrediction/HEAD/Automating 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