├── .gitignore ├── .gitlab-ci.yml ├── .pre-commit-config.yaml ├── CITATION.cff ├── CODE_OF_CONDUCT.md ├── CONTRIBUTING.md ├── LICENSE ├── README.md ├── docs ├── .readthedocs.yaml ├── Makefile ├── _static │ ├── custom.js │ ├── im_icon_transparent-200x200.png │ ├── im_logo_transparent.png │ └── im_logo_transparent_dark.png ├── api │ ├── entropy │ │ └── index.rst │ ├── index.rst │ ├── mi │ │ └── index.rst │ └── te │ │ └── index.rst ├── bibliography.rst ├── changelog.md ├── conf.py ├── demos │ ├── Schreiber_Article.ipynb │ ├── Time_Performance-Entropy-0.5.0_approaches.png │ ├── Time_Performance.ipynb │ ├── gaussian_data.md │ ├── index.md │ └── time_data.pkl ├── getting_started.md ├── guide │ ├── JSD.md │ ├── KLD.md │ ├── cond_entropy │ │ └── index.md │ ├── cond_mi │ │ ├── index.md │ │ └── ksg_cond_mi.md │ ├── cond_te │ │ ├── index.md │ │ └── ksg_cond_te.md │ ├── cross_entropy │ │ └── index.md │ ├── entropy │ │ ├── discrete.md │ │ ├── index.md │ │ ├── kernel.md │ │ ├── kozachenko_leonenko.md │ │ ├── ordinal.md │ │ ├── renyi.md │ │ └── tsallis.md │ ├── estimator_selection.md │ ├── estimator_usage.md │ ├── index.md │ ├── introduction.md │ ├── mutual_information │ │ ├── discrete.md │ │ ├── index.md │ │ ├── kernel.md │ │ ├── kraskov_stoegbauer_grassberger.md │ │ ├── ordinal.md │ │ └── renyi_tsallis.md │ ├── settings.md │ ├── statistical_tests.md │ └── transfer_entropy │ │ ├── discrete.md │ │ ├── index.md │ │ ├── kernel.md │ │ ├── kraskov_stoegbauer_grassberger.md │ │ ├── ordinal.md │ │ └── renyi_tsallis.md ├── index.md ├── make.bat └── refs.bib ├── infomeasure ├── __init__.py ├── _version.py ├── composite_measures │ ├── __init__.py │ ├── jsd.py │ └── kld.py ├── estimators │ ├── __init__.py │ ├── base.py │ ├── entropy │ │ ├── __init__.py │ │ ├── ansb.py │ │ ├── bayes.py │ │ ├── bonachela.py │ │ ├── chao_shen.py │ │ ├── chao_wang_jost.py │ │ ├── discrete.py │ │ ├── grassberger.py │ │ ├── kernel.py │ │ ├── kozachenko_leonenko.py │ │ ├── miller_madow.py │ │ ├── nsb.py │ │ ├── ordinal.py │ │ ├── renyi.py │ │ ├── shrink.py │ │ ├── tsallis.py │ │ └── zhang.py │ ├── functional.py │ ├── mixins.py │ ├── mutual_information │ │ ├── __init__.py │ │ ├── ansb.py │ │ ├── bayes.py │ │ ├── bonachela.py │ │ ├── chao_shen.py │ │ ├── chao_wang_jost.py │ │ ├── discrete.py │ │ ├── grassberger.py │ │ ├── kernel.py │ │ ├── kraskov_stoegbauer_grassberger.py │ │ ├── miller_madow.py │ │ ├── nsb.py │ │ ├── ordinal.py │ │ ├── renyi.py │ │ ├── shrink.py │ │ ├── tsallis.py │ │ └── zhang.py │ ├── transfer_entropy │ │ ├── __init__.py │ │ ├── ansb.py │ │ ├── bayes.py │ │ ├── bonachela.py │ │ ├── chao_shen.py │ │ ├── chao_wang_jost.py │ │ ├── discrete.py │ │ ├── grassberger.py │ │ ├── kernel.py │ │ ├── kraskov_stoegbauer_grassberger.py │ │ ├── miller_madow.py │ │ ├── nsb.py │ │ ├── ordinal.py │ │ ├── renyi.py │ │ ├── shrink.py │ │ ├── tsallis.py │ │ └── zhang.py │ └── utils │ │ ├── __init__.py │ │ ├── array.py │ │ ├── discrete_interaction_information.py │ │ ├── discrete_transfer_entropy.py │ │ ├── exponential_family.py │ │ ├── kde.py │ │ ├── normalize.py │ │ ├── ordinal.py │ │ ├── te_slicing.py │ │ ├── test_unit_ball_volume.py │ │ └── unit_ball_volume.py └── utils │ ├── __init__.py │ ├── config.py │ ├── data.py │ ├── exceptions.py │ └── types.py ├── pyproject.toml ├── requirements ├── all_requirements.txt ├── build_requirements.txt ├── doc_requirements.txt ├── linter_requirements.txt ├── packaging_requirements.txt └── test_requirements.txt └── tests ├── __init__.py ├── composite_measures ├── __init__.py ├── test_jsd.py └── test_kld.py ├── conftest.py ├── estimators ├── __init__.py ├── entropy │ ├── __init__.py │ ├── test_ansb.py │ ├── test_bayes.py │ ├── test_bonachela.py │ ├── test_chao_shen.py │ ├── test_chao_wang_jost.py │ ├── test_discrete.py │ ├── test_gaussian_distribution.py │ ├── test_grassberger.py │ ├── test_kernel.py │ ├── test_kozachenko_leonenko.py │ ├── test_miller_madow.py │ ├── test_nsb.py │ ├── test_ordinal.py │ ├── test_renyi.py │ ├── test_shrink.py │ ├── test_tsallis.py │ └── test_zhang.py ├── mutual_information │ ├── __init__.py │ ├── test_ansb.py │ ├── test_bayes.py │ ├── test_bonachela.py │ ├── test_chao_shen.py │ ├── test_chao_wang_jost.py │ ├── test_discrete.py │ ├── test_gauss_correlated.py │ ├── test_grassberger.py │ ├── test_kernel.py │ ├── test_kraskov_stoegbauer_grassberger.py │ ├── test_miller_madow.py │ ├── test_nsb.py │ ├── test_ordinal.py │ ├── test_renyi.py │ ├── test_shrink.py │ ├── test_tsallis.py │ └── test_zhang.py ├── test_base.py ├── test_functional.py ├── test_statistical_testing.py ├── transfer_entropy │ ├── __init__.py │ ├── test_ansb.py │ ├── test_bayes.py │ ├── test_bonachela.py │ ├── test_chao_shen.py │ ├── test_chao_wang_jost.py │ ├── test_discrete.py │ ├── test_grassberger.py │ ├── test_kernel.py │ ├── test_kraskov_stoegbauer_grassberger.py │ ├── test_miller_madow.py │ ├── test_nsb.py │ ├── test_ordinal.py │ ├── test_renyi.py │ ├── test_shrink.py │ ├── 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-------------------------------------------------------------------------------- 1 | # Code Quality 2 | pre-commit 3 | ruff 4 | -------------------------------------------------------------------------------- /requirements/packaging_requirements.txt: -------------------------------------------------------------------------------- 1 | twine 2 | python-build 3 | -------------------------------------------------------------------------------- /requirements/test_requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cbueth/infomeasure/HEAD/requirements/test_requirements.txt -------------------------------------------------------------------------------- /tests/__init__.py: -------------------------------------------------------------------------------- 1 | """Tests for the infomeasure package.""" 2 | -------------------------------------------------------------------------------- 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