├── .gitignore ├── LICENSE ├── README.md ├── bc_starter_package ├── README.md └── doc │ ├── BC Curation Principles and Completion GLs.xlsx │ ├── BC DEC Templates.xlsx │ ├── BC Governance Process.jpg │ ├── BC Governance.docx │ ├── BC Governance.pdf │ ├── BC Overview Training.pdf │ ├── BC Overview Training.pptx │ ├── Charter for COSMOS_V1.docx │ ├── Charter for COSMOS_V1.pdf │ ├── Charter for COSMOS_V2.docx │ ├── Charter for COSMOS_V2.pdf │ ├── High Level Biomedical Concept Process.pdf │ └── High Level Biomedical Concept Process.pptx ├── curation ├── BC_Package_2022_10_26.xlsx ├── BC_Package_2023_02_13.xlsx ├── BC_Package_2023_03_31.xlsx ├── BC_Package_R10.xlsx ├── BC_Package_R10_Breast_Cancer.xlsx ├── BC_Package_R10_ECG.xlsx ├── BC_Package_R10_ECG_SDTM.xlsx ├── BC_Package_R11_AE_Edit.xlsx ├── BC_Package_R11_BC_Lindus Health.xlsx ├── BC_Package_R11_DM.xlsx ├── BC_Package_R11_LB_GF_Edits.xlsx ├── BC_Package_R11_MK.xlsx ├── BC_Package_R11_UR.xlsx ├── BC_Package_R11_VS.xlsx ├── BC_Package_R4_2023_07_06.xlsx ├── BC_Package_R4_Oncology_RECIST11_2023_07_06.xlsx ├── BC_Package_R5_LZZT.xlsx ├── BC_Package_R6_LZZT.xlsx ├── BC_Package_R7_BC_updates.xlsx ├── BC_Package_R7_DD.xlsx ├── BC_Package_R7_FACV.xlsx ├── BC_Package_R7_GF.xlsx ├── BC_Package_R7_SDTM_updates.xlsx ├── BC_Package_R8_BC_updates.xlsx ├── BC_Package_R8_LUGANO_RS.xlsx ├── BC_Package_R8_RANO_RS.xlsx ├── BC_Package_R8_SDTM_updates.xlsx ├── BC_Package_R9_public_review_updates.xlsx ├── README.md └── draft │ └── collection_specialization_vs_final_draft.xlsx ├── export ├── archive │ ├── cdisc_biomedical_concepts_20231003.xlsx │ ├── cdisc_biomedical_concepts_20231212.xlsx │ ├── cdisc_biomedical_concepts_20240402.xlsx │ ├── cdisc_biomedical_concepts_20240627.xlsx │ ├── cdisc_biomedical_concepts_20241216.xlsx │ ├── cdisc_biomedical_concepts_20241217.xlsx │ ├── cdisc_biomedical_concepts_20250401.xlsx │ ├── cdisc_sdtm_dataset_specializations_20231003.xlsx │ ├── cdisc_sdtm_dataset_specializations_20231212.xlsx │ ├── cdisc_sdtm_dataset_specializations_20240402.xlsx │ ├── cdisc_sdtm_dataset_specializations_20240627.xlsx │ ├── cdisc_sdtm_dataset_specializations_20241216.xlsx │ ├── cdisc_sdtm_dataset_specializations_20241217.xlsx │ └── cdisc_sdtm_dataset_specializations_20250401.xlsx ├── cdisc_biomedical_concepts_latest.csv ├── cdisc_biomedical_concepts_latest.xlsx ├── cdisc_biomedical_concepts_latest_hierarchy.csv ├── cdisc_sdtm_dataset_specializations_latest.csv └── cdisc_sdtm_dataset_specializations_latest.xlsx ├── mkdocs.yml ├── model ├── .linkmllint.yaml ├── COSMoS-Biomedical-Concepts-Collection-Schema.svg ├── COSMoS-Biomedical-Concepts-SDTM-Schema.svg ├── COSMoS-Biomedical-Concepts-Schema.svg ├── cosmos_bc_model.json ├── cosmos_bc_model.md ├── cosmos_bc_model.svg ├── cosmos_bc_model.yaml ├── cosmos_bc_model.yuml ├── cosmos_collection_bc_model.json ├── cosmos_collection_bc_model.md ├── cosmos_collection_bc_model.svg ├── cosmos_collection_bc_model.yaml ├── cosmos_collection_bc_model.yuml ├── cosmos_sdtm_bc_model.json ├── cosmos_sdtm_bc_model.md ├── cosmos_sdtm_bc_model.svg ├── cosmos_sdtm_bc_model.yaml └── cosmos_sdtm_bc_model.yuml ├── openapi ├── cosmos.yaml ├── cosmos_openapi_v1.json ├── cosmos_openapi_v2.json └── cosmos_v2.yaml ├── project ├── bc │ ├── cosmos_bc_model.py │ ├── cosmos_bc_model_api.py │ ├── cosmos_bc_model_pydantic.py │ ├── excel │ │ └── cosmos_bc_model.xlsx │ ├── graphql │ │ └── cosmos_bc_model.graphql │ ├── jsonld │ │ ├── cosmos_bc_model.context.jsonld │ │ └── cosmos_bc_model.jsonld │ ├── jsonschema │ │ └── cosmos_bc_model.schema.json │ ├── owl │ │ └── cosmos_bc_model.owl.ttl │ ├── prefixmap │ │ └── cosmos_bc_model.yaml │ ├── protobuf │ │ └── cosmos_bc_model.proto │ ├── shacl │ │ └── cosmos_bc_model.shacl.ttl │ ├── shex │ │ └── cosmos_bc_model.shex │ └── sqlschema │ │ └── cosmos_bc_model.sql ├── collection │ ├── cosmos_collection_bc_model.py │ ├── cosmos_collection_bc_model_api.py │ ├── cosmos_collection_bc_model_pydantic.py │ ├── excel │ │ └── cosmos_collection_bc_model.xlsx │ ├── graphql │ │ └── cosmos_collection_bc_model.graphql │ ├── jsonld │ │ ├── cosmos_collection_bc_model.context.jsonld │ │ └── cosmos_collection_bc_model.jsonld │ ├── jsonschema │ │ └── cosmos_collection_bc_model.schema.json │ ├── owl │ │ └── cosmos_collection_bc_model.owl.ttl │ ├── prefixmap │ │ └── cosmos_collection_bc_model.yaml │ ├── protobuf │ │ └── cosmos_collection_bc_model.proto │ ├── shacl │ │ └── cosmos_collection_bc_model.shacl.ttl │ ├── shex │ │ └── cosmos_collection_bc_model.shex │ └── sqlschema │ │ └── cosmos_collection_bc_model.sql └── sdtm │ ├── cosmos_sdtm_bc_model.py │ ├── cosmos_sdtm_bc_model_api.py │ ├── cosmos_sdtm_bc_model_pydantic.py │ ├── excel │ └── cosmos_sdtm_bc_model.xlsx │ ├── graphql │ └── cosmos_sdtm_bc_model.graphql │ ├── jsonld │ ├── cosmos_sdtm_bc_model.context.jsonld │ └── cosmos_sdtm_bc_model.jsonld │ ├── jsonschema │ └── cosmos_sdtm_bc_model.schema.json │ ├── owl │ └── cosmos_sdtm_bc_model.owl.ttl │ ├── prefixmap │ └── cosmos_sdtm_bc_model.yaml │ ├── protobuf │ └── cosmos_sdtm_bc_model.proto │ ├── shacl │ └── cosmos_sdtm_bc_model.shacl.ttl │ ├── shex │ └── cosmos_sdtm_bc_model.shex │ └── sqlschema │ └── cosmos_sdtm_bc_model.sql ├── requirements.txt ├── utilities ├── config.sas ├── convert_bc_xlsx2yaml.sas ├── convert_collection_xlsx2yaml.sas ├── convert_sdtm_xlsx2yaml.sas ├── create_functions.sas ├── data │ └── .gitignore ├── downloads │ └── .gitignore ├── get_latest_codelists_api.sas ├── get_latest_relations_sdtm_api.sas ├── images │ ├── 2023_Standards-Badges_v5.2-BCs.png │ ├── bc-sdtm-erd-light-small.png │ ├── bc-sdtm-erd-light.png │ └── bc-sdtm-erd.md ├── macros │ ├── create_hierarchy.sas │ ├── create_template.sas │ ├── generate_yaml_from_bc.sas │ ├── generate_yaml_from_bc_collection.sas │ ├── generate_yaml_from_bc_sdtm.sas │ ├── get_api_response.sas │ ├── get_latest_codelist_package.sas │ ├── get_subset_codelists.sas │ ├── prochttp_check_return.sas │ ├── read_bc_from_json.sas │ ├── read_sdtm_from_json.sas │ ├── readexcel.sas │ ├── util_gettree.sas │ └── varexist.sas ├── report_latest_bc_api.sas ├── report_latest_sdtm_api.sas ├── reports │ └── .gitignore ├── test_convert_latest_xlsx2yaml.sas ├── validate_spreadsheet_collection.sas └── validate_spreadsheet_sdtm.sas └── yaml ├── 20221026 ├── bc │ ├── biomedical_concept_lb_c105585.yaml │ ├── biomedical_concept_lb_c147905.yaml │ ├── biomedical_concept_lb_c17241.yaml │ ├── biomedical_concept_lb_c28133.yaml │ ├── biomedical_concept_lb_c49237.yaml │ ├── biomedical_concept_lb_c49286.yaml │ ├── biomedical_concept_lb_c51948.yaml │ ├── biomedical_concept_lb_c64431.yaml │ ├── biomedical_concept_lb_c64432.yaml │ ├── biomedical_concept_lb_c64433.yaml │ ├── biomedical_concept_lb_c64467.yaml │ ├── biomedical_concept_lb_c64470.yaml │ ├── biomedical_concept_lb_c64547.yaml │ ├── biomedical_concept_lb_c64809.yaml │ ├── biomedical_concept_lb_c64848.yaml │ ├── biomedical_concept_lb_c64853.yaml │ ├── biomedical_concept_lb_c74946.yaml │ ├── biomedical_concept_lb_c74954.yaml │ ├── biomedical_concept_lb_new_1.yaml │ ├── biomedical_concept_vs_c100948.yaml │ ├── biomedical_concept_vs_c16358.yaml │ ├── biomedical_concept_vs_c164634.yaml │ ├── biomedical_concept_vs_c174446.yaml │ ├── biomedical_concept_vs_c25298.yaml │ ├── biomedical_concept_vs_c25299.yaml │ ├── biomedical_concept_vs_c49672.yaml │ ├── biomedical_concept_vs_c49676.yaml │ ├── biomedical_concept_vs_c49677.yaml │ ├── biomedical_concept_vs_c49678.yaml │ ├── biomedical_concept_vs_c49680.yaml │ ├── biomedical_concept_vs_c54706.yaml │ └── biomedical_concept_vs_c81328.yaml └── sdtm │ ├── sdtm_bc_specialization_lb_albserpl.yaml │ ├── sdtm_bc_specialization_lb_alburin.yaml │ ├── sdtm_bc_specialization_lb_alpserpl.yaml │ ├── sdtm_bc_specialization_lb_altserpl.yaml │ ├── sdtm_bc_specialization_lb_astserpl.yaml │ ├── sdtm_bc_specialization_lb_basobld.yaml │ ├── sdtm_bc_specialization_lb_creatserpl.yaml │ ├── sdtm_bc_specialization_lb_creaturin.yaml │ ├── sdtm_bc_specialization_lb_glucbld.yaml │ ├── sdtm_bc_specialization_lb_glucpl.yaml │ ├── sdtm_bc_specialization_lb_glucser.yaml │ ├── sdtm_bc_specialization_lb_glucua.yaml │ ├── sdtm_bc_specialization_lb_glucurin.yaml │ ├── sdtm_bc_specialization_lb_hgbbld.yaml │ ├── sdtm_bc_specialization_lb_hgbblddip.yaml │ ├── sdtm_bc_specialization_lb_kbld.yaml │ ├── sdtm_bc_specialization_lb_kserpl.yaml │ ├── sdtm_bc_specialization_lb_kurin.yaml │ ├── sdtm_bc_specialization_lb_sodiumbld.yaml │ ├── sdtm_bc_specialization_lb_sodiumserpl.yaml │ ├── sdtm_bc_specialization_lb_sodiumurin.yaml │ ├── sdtm_bc_specialization_vs_bmi.yaml │ ├── sdtm_bc_specialization_vs_diabp.yaml │ ├── sdtm_bc_specialization_vs_frmsize.yaml │ ├── sdtm_bc_specialization_vs_height.yaml │ ├── sdtm_bc_specialization_vs_hr.yaml │ ├── sdtm_bc_specialization_vs_pulse.yaml │ ├── sdtm_bc_specialization_vs_resp.yaml │ ├── sdtm_bc_specialization_vs_sysbp.yaml │ ├── sdtm_bc_specialization_vs_temp.yaml │ ├── sdtm_bc_specialization_vs_weight.yaml │ └── sdtm_bc_specialization_vs_wstcir.yaml ├── 20230213 ├── bc │ ├── biomedical_concept_lb_1_c105585.yaml │ ├── biomedical_concept_lb_1_c51946.yaml │ ├── biomedical_concept_lb_1_c51948.yaml │ ├── biomedical_concept_lb_1_c51949.yaml │ ├── biomedical_concept_lb_1_c51951.yaml │ ├── biomedical_concept_lb_1_c63321.yaml │ ├── biomedical_concept_lb_1_c64431.yaml │ ├── biomedical_concept_lb_1_c64432.yaml │ ├── biomedical_concept_lb_1_c64433.yaml │ ├── biomedical_concept_lb_1_c64467.yaml │ ├── biomedical_concept_lb_1_c64470.yaml │ ├── biomedical_concept_lb_1_c64488.yaml │ ├── biomedical_concept_lb_1_c64495.yaml │ ├── biomedical_concept_lb_1_c64545.yaml │ ├── biomedical_concept_lb_1_c64547.yaml │ ├── biomedical_concept_lb_1_c64550.yaml │ ├── biomedical_concept_lb_1_c64796.yaml │ ├── biomedical_concept_lb_1_c64809.yaml │ ├── biomedical_concept_lb_1_c64814.yaml │ ├── biomedical_concept_lb_1_c64823.yaml │ ├── biomedical_concept_lb_1_c64848.yaml │ ├── biomedical_concept_lb_1_c64853.yaml │ ├── biomedical_concept_lb_1_c64857.yaml │ ├── biomedical_concept_lb_1_c64858.yaml │ ├── biomedical_concept_lb_1_c74667.yaml │ ├── biomedical_concept_lb_2_c139084.yaml │ ├── biomedical_concept_lb_2_c147355.yaml │ ├── biomedical_concept_lb_2_c147403.yaml │ ├── biomedical_concept_lb_2_c147406.yaml │ ├── biomedical_concept_lb_2_c74675.yaml │ ├── biomedical_concept_lb_2_c75342.yaml │ ├── biomedical_concept_lb_2_c82624.yaml │ ├── biomedical_concept_lb_2_c92249.yaml │ └── biomedical_concept_lb_2_c96591.yaml └── sdtm │ ├── sdtm_bc_specialization_lb_1_altserpl.yaml │ ├── sdtm_bc_specialization_lb_1_astserpl.yaml │ ├── sdtm_bc_specialization_lb_1_bicarbbld.yaml │ ├── sdtm_bc_specialization_lb_1_cabld.yaml │ ├── sdtm_bc_specialization_lb_1_caserpl.yaml │ ├── sdtm_bc_specialization_lb_1_clbld.yaml │ ├── sdtm_bc_specialization_lb_1_clserpl.yaml │ ├── sdtm_bc_specialization_lb_1_co2bld.yaml │ ├── sdtm_bc_specialization_lb_1_co2serpl.yaml │ ├── sdtm_bc_specialization_lb_1_eosbld.yaml │ ├── sdtm_bc_specialization_lb_1_hctbld.yaml │ ├── sdtm_bc_specialization_lb_1_lymphbld.yaml │ ├── sdtm_bc_specialization_lb_1_monobld.yaml │ ├── sdtm_bc_specialization_lb_1_neutbld.yaml │ ├── sdtm_bc_specialization_lb_1_phosserpl.yaml │ ├── sdtm_bc_specialization_lb_1_platbld.yaml │ ├── sdtm_bc_specialization_lb_1_protserpl.yaml │ ├── sdtm_bc_specialization_lb_1_rbcbld.yaml │ ├── sdtm_bc_specialization_lb_1_urateserpl.yaml │ ├── sdtm_bc_specialization_lb_1_wbcbld.yaml │ ├── sdtm_bc_specialization_lb_2_carbxhgb.yaml │ ├── sdtm_bc_specialization_lb_2_cmonoxbld.yaml │ ├── sdtm_bc_specialization_lb_2_cmonoxexpair.yaml │ ├── sdtm_bc_specialization_lb_2_cotinineurin.yaml │ ├── sdtm_bc_specialization_lb_2_hbcohgb.yaml │ ├── sdtm_bc_specialization_lb_2_nicotineserpl.yaml │ ├── sdtm_bc_specialization_lb_2_nicotineurin.yaml │ └── sdtm_bc_specialization_lb_2_nornctnurin.yaml ├── 20230331 └── bc │ ├── biomedical_concept_ae_c36291.yaml │ ├── biomedical_concept_ae_c41331.yaml │ ├── biomedical_concept_be_c70945.yaml │ ├── biomedical_concept_cm_c25218.yaml │ ├── biomedical_concept_cm_c49236.yaml │ ├── biomedical_concept_cm_c53630.yaml │ ├── biomedical_concept_dm_c16564.yaml │ ├── biomedical_concept_dm_c17049.yaml │ ├── biomedical_concept_dm_c28421.yaml │ ├── biomedical_concept_dm_c69260.yaml │ ├── biomedical_concept_ds_c105448.yaml │ ├── biomedical_concept_ds_c114209.yaml │ ├── biomedical_concept_ds_c132447.yaml │ ├── biomedical_concept_ds_c139236.yaml │ ├── biomedical_concept_ds_c16735.yaml │ ├── biomedical_concept_ds_c50996.yaml │ ├── biomedical_concept_ds_c74588.yaml │ ├── biomedical_concept_ds_c74590.yaml │ ├── biomedical_concept_eg_c117773.yaml │ ├── biomedical_concept_eg_c117779.yaml │ ├── biomedical_concept_eg_c117783.yaml │ ├── biomedical_concept_eg_c117784.yaml │ ├── biomedical_concept_eg_c117786.yaml │ ├── biomedical_concept_eg_c117791.yaml │ ├── biomedical_concept_eg_c118165.yaml │ ├── biomedical_concept_eg_c119259.yaml │ ├── biomedical_concept_eg_c174285.yaml │ ├── biomedical_concept_eg_c181655.yaml │ ├── biomedical_concept_eg_c25391.yaml │ ├── biomedical_concept_eg_c62085.yaml │ ├── biomedical_concept_lb_C200249.yaml │ ├── biomedical_concept_lb_c119293.yaml │ ├── biomedical_concept_lb_c122157.yaml │ ├── biomedical_concept_lb_c125949.yaml │ ├── biomedical_concept_lb_c147128.yaml │ ├── biomedical_concept_lb_c174314.yaml │ ├── biomedical_concept_lb_c38037.yaml │ ├── biomedical_concept_lb_c64430.yaml │ ├── biomedical_concept_lb_c64548.yaml │ ├── biomedical_concept_lb_c64851.yaml │ ├── biomedical_concept_lb_c64855.yaml │ ├── biomedical_concept_lb_c73495.yaml │ ├── biomedical_concept_lb_c74737.yaml │ ├── biomedical_concept_lb_c74804.yaml │ ├── biomedical_concept_lb_c74834.yaml │ ├── biomedical_concept_lb_c82621.yaml │ ├── biomedical_concept_lb_c98762.yaml │ ├── biomedical_concept_mb_c171439.yaml │ ├── biomedical_concept_mb_c171456.yaml │ ├── biomedical_concept_mb_c171531.yaml │ ├── biomedical_concept_mb_c171532.yaml │ ├── biomedical_concept_mb_c49188.yaml │ ├── biomedical_concept_mh_c82571.yaml │ ├── biomedical_concept_mh_c83118.yaml │ ├── biomedical_concept_pr_c16502.yaml │ ├── biomedical_concept_pr_c17204.yaml │ ├── biomedical_concept_pr_c38101.yaml │ ├── biomedical_concept_re_c171521.yaml │ ├── biomedical_concept_re_c181043.yaml │ ├── biomedical_concept_vs_c18020.yaml │ └── biomedical_concept_vs_c60832.yaml ├── 20251231 └── collection │ ├── collection_bmi_horizontal.yaml │ ├── collection_bmi_vertical.yaml │ ├── collection_diabp_horizontal.yaml │ ├── collection_diabp_vertical.yaml │ ├── collection_frmsize_horizontal.yaml │ ├── collection_frmsize_vertical.yaml │ ├── collection_height_horizontal.yaml │ ├── collection_height_vertical.yaml │ ├── collection_hr_horzontal.yaml │ ├── collection_hr_vertical.yaml │ ├── collection_oxysat_horizontal.yaml │ ├── collection_oxysat_vertical.yaml │ ├── collection_pulse_horizontal.yaml │ ├── collection_pulse_vertical.yaml │ ├── collection_resp_horizontal.yaml │ ├── collection_resp_vertical.yaml │ ├── collection_sysbp_horizontal.yaml │ ├── collection_sysbp_vertical.yaml │ ├── collection_temp_horizontal.yaml │ ├── collection_temp_vertical.yaml │ ├── collection_vsperf_vertical.yaml │ ├── collection_weight_horizontal.yaml │ ├── collection_weight_vertical.yaml │ ├── collection_wstcir_horizontal.yaml │ └── collection_wstcir_vertical.yaml ├── 20230706_nononco ├── bc │ ├── biomedical_concept_ae_c156629.yaml │ ├── biomedical_concept_ae_c179175.yaml │ ├── biomedical_concept_ae_c179176.yaml │ ├── biomedical_concept_ae_c41331.yaml │ ├── biomedical_concept_be_c128947.yaml │ ├── biomedical_concept_be_c158280.yaml │ ├── biomedical_concept_be_c17201.yaml │ ├── biomedical_concept_be_c179747.yaml │ ├── biomedical_concept_be_c179748.yaml │ ├── biomedical_concept_be_c63521.yaml │ ├── biomedical_concept_be_edits_c70945.yaml │ ├── biomedical_concept_ds_c142742.yaml │ ├── biomedical_concept_ds_c150824.yaml │ ├── biomedical_concept_ds_c170610.yaml │ ├── biomedical_concept_ds_c186208.yaml │ ├── biomedical_concept_eg_c111131.yaml │ ├── biomedical_concept_eg_c111132.yaml │ ├── biomedical_concept_eg_c111155.yaml │ ├── biomedical_concept_eg_c111238.yaml │ ├── biomedical_concept_eg_c111280.yaml │ ├── biomedical_concept_eg_c111285.yaml │ ├── biomedical_concept_eg_c111307.yaml │ ├── biomedical_concept_eg_c111312.yaml │ ├── biomedical_concept_eg_c111320.yaml │ ├── biomedical_concept_eg_c111321.yaml │ ├── biomedical_concept_eg_c111330.yaml │ ├── biomedical_concept_eg_c111331.yaml │ ├── biomedical_concept_eg_c111363.yaml │ ├── biomedical_concept_eg_c83146.yaml │ ├── biomedical_concept_eg_edits_c117773.yaml │ ├── biomedical_concept_eg_edits_c117779.yaml │ ├── biomedical_concept_eg_edits_c117783.yaml │ ├── biomedical_concept_eg_edits_c117784.yaml │ ├── biomedical_concept_eg_edits_c117786.yaml │ ├── biomedical_concept_eg_edits_c117791.yaml │ ├── biomedical_concept_eg_edits_c174285.yaml │ ├── biomedical_concept_lb_c127127.yaml │ ├── biomedical_concept_lb_c44414.yaml │ ├── biomedical_concept_lb_c45398.yaml │ ├── biomedical_concept_lb_edits_c119293.yaml │ ├── biomedical_concept_lb_edits_c122157.yaml │ ├── biomedical_concept_lb_edits_c171439.yaml │ ├── biomedical_concept_lb_edits_c171531.yaml │ ├── biomedical_concept_lb_edits_c171532.yaml │ ├── biomedical_concept_lb_edits_c174314.yaml │ ├── biomedical_concept_lb_edits_c64851.yaml │ ├── biomedical_concept_lb_edits_c73495.yaml │ ├── biomedical_concept_lb_edits_c74834.yaml │ ├── biomedical_concept_lb_edits_c82621.yaml │ ├── biomedical_concept_mh_c200145.yaml │ ├── biomedical_concept_pr_edits_c17204.yaml │ ├── biomedical_concept_pr_edits_c38101.yaml │ ├── biomedical_concept_vs_edits_c25298.yaml │ └── biomedical_concept_vs_edits_c25299.yaml └── sdtm │ ├── sdtm_bc_specialization_ae_ae.yaml │ ├── sdtm_bc_specialization_ae_aepresp.yaml │ ├── sdtm_bc_specialization_be_collecting.yaml │ ├── sdtm_bc_specialization_be_culturing.yaml │ ├── sdtm_bc_specialization_be_flashfreezing.yaml │ ├── sdtm_bc_specialization_be_isolating.yaml │ ├── sdtm_bc_specialization_be_shipping.yaml │ ├── sdtm_bc_specialization_be_storing.yaml │ ├── sdtm_bc_specialization_be_thawing.yaml │ ├── sdtm_bc_specialization_ds_consent.yaml │ ├── sdtm_bc_specialization_ds_conswdrl.yaml │ ├── sdtm_bc_specialization_ds_eligmet.yaml │ ├── sdtm_bc_specialization_ds_failcont.yaml │ ├── sdtm_bc_specialization_ds_failrand.yaml │ ├── sdtm_bc_specialization_ds_protdev.yaml │ ├── sdtm_bc_specialization_ds_rand.yaml │ ├── sdtm_bc_specialization_ds_sitetransfer.yaml │ ├── sdtm_bc_specialization_ds_unblind.yaml │ ├── sdtm_bc_specialization_eg_avcond.yaml │ ├── sdtm_bc_specialization_eg_axisvolt.yaml │ ├── sdtm_bc_specialization_eg_chyptenl.yaml │ ├── sdtm_bc_specialization_eg_eghrmn.yaml │ ├── sdtm_bc_specialization_eg_egintp.yaml │ ├── sdtm_bc_specialization_eg_ivtiacd.yaml │ ├── sdtm_bc_specialization_eg_pacemakr.yaml │ ├── sdtm_bc_specialization_eg_prag.yaml │ ├── sdtm_bc_specialization_eg_qrs_axis.yaml │ ├── sdtm_bc_specialization_eg_qrsag.yaml │ ├── sdtm_bc_specialization_eg_qtag.yaml │ ├── sdtm_bc_specialization_eg_qtcbag.yaml │ ├── sdtm_bc_specialization_eg_qtcfag.yaml │ ├── sdtm_bc_specialization_eg_qtcunsag.yaml │ ├── sdtm_bc_specialization_eg_rhynos.yaml │ ├── sdtm_bc_specialization_eg_rrag.yaml │ ├── sdtm_bc_specialization_eg_snrarry.yaml │ ├── sdtm_bc_specialization_eg_sprarry.yaml │ ├── sdtm_bc_specialization_eg_sprtarry.yaml │ ├── sdtm_bc_specialization_eg_ststwuw.yaml │ ├── sdtm_bc_specialization_eg_vtarry.yaml │ ├── sdtm_bc_specialization_eg_vttarry.yaml │ ├── sdtm_bc_specialization_lb_biliserpl.yaml │ ├── sdtm_bc_specialization_lb_biliurin.yaml │ ├── sdtm_bc_specialization_lb_blycebld.yaml │ ├── sdtm_bc_specialization_lb_crpserpl.yaml │ ├── sdtm_bc_specialization_lb_ddimerppp.yaml │ ├── sdtm_bc_specialization_lb_edits2_albserpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_alburin.yaml │ ├── sdtm_bc_specialization_lb_edits2_bicarbbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_carbxhgb.yaml │ ├── sdtm_bc_specialization_lb_edits2_clbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_clserpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_cmonoxbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_cmonoxexpair.yaml │ ├── sdtm_bc_specialization_lb_edits2_cotinineurin.yaml │ ├── sdtm_bc_specialization_lb_edits2_creatserpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_eosbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_glucbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_glucpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_glucser.yaml │ ├── sdtm_bc_specialization_lb_edits2_glucurin.yaml │ ├── sdtm_bc_specialization_lb_edits2_hbcohgb.yaml │ ├── sdtm_bc_specialization_lb_edits2_hctbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_hgbbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_hgbblddip.yaml │ ├── sdtm_bc_specialization_lb_edits2_kbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_kserpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_kurin.yaml │ ├── sdtm_bc_specialization_lb_edits2_lymphbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_monobld.yaml │ ├── sdtm_bc_specialization_lb_edits2_neutbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_nicotineserpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_nicotineurin.yaml │ ├── sdtm_bc_specialization_lb_edits2_nornctnurin.yaml │ ├── sdtm_bc_specialization_lb_edits2_phosserpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_platbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_protserpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_sodiumbld.yaml │ ├── sdtm_bc_specialization_lb_edits2_sodiumserpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_urateserpl.yaml │ ├── sdtm_bc_specialization_lb_edits2_wbcbld.yaml │ ├── sdtm_bc_specialization_lb_edits_alpserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_altserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_astserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_basobld.yaml │ ├── sdtm_bc_specialization_lb_edits_cabld.yaml │ ├── sdtm_bc_specialization_lb_edits_caserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_creaturin.yaml │ ├── sdtm_bc_specialization_lb_edits_rbcbld.yaml │ ├── sdtm_bc_specialization_lb_ferritinserpl.yaml │ ├── sdtm_bc_specialization_lb_hcgcnctserpl.yaml │ ├── sdtm_bc_specialization_lb_hcgserpl.yaml │ ├── sdtm_bc_specialization_lb_hcgurin.yaml │ ├── sdtm_bc_specialization_lb_intlk6serpl.yaml │ ├── sdtm_bc_specialization_lb_ldhserpl.yaml │ ├── sdtm_bc_specialization_lb_po2fio2arterial.yaml │ ├── sdtm_bc_specialization_lb_tlycebld.yaml │ ├── sdtm_bc_specialization_lb_ureanserpl.yaml │ ├── sdtm_bc_specialization_mb_sar2abdet.yaml │ ├── sdtm_bc_specialization_mb_sar2rnaqntcyc.yaml │ ├── sdtm_bc_specialization_mb_sar2rnaviral.yaml │ ├── sdtm_bc_specialization_mb_sarscov2det.yaml │ ├── sdtm_bc_specialization_mh_medhistfree.yaml │ ├── sdtm_bc_specialization_mh_medhistpresp.yaml │ ├── sdtm_bc_specialization_pr_ctscanchest.yaml │ ├── sdtm_bc_specialization_pr_xraychest.yaml │ ├── sdtm_bc_specialization_vs_edits_bmi.yaml │ ├── sdtm_bc_specialization_vs_edits_diabp.yaml │ ├── sdtm_bc_specialization_vs_edits_frmsize.yaml │ ├── sdtm_bc_specialization_vs_edits_height.yaml │ ├── sdtm_bc_specialization_vs_edits_hr.yaml │ ├── sdtm_bc_specialization_vs_edits_pulse.yaml │ ├── sdtm_bc_specialization_vs_edits_resp.yaml │ ├── sdtm_bc_specialization_vs_edits_sysbp.yaml │ ├── sdtm_bc_specialization_vs_edits_temp.yaml │ ├── sdtm_bc_specialization_vs_edits_weight.yaml │ ├── sdtm_bc_specialization_vs_edits_wstcir.yaml │ └── sdtm_bc_specialization_vs_oxysat.yaml ├── 20230706_oncology ├── bc │ ├── biomedical_concept_recist_c103420.yaml │ ├── biomedical_concept_recist_c124448.yaml │ ├── biomedical_concept_recist_c135508.yaml │ ├── biomedical_concept_recist_c161483.yaml │ ├── biomedical_concept_recist_c171082.yaml │ ├── biomedical_concept_recist_c178053.yaml │ ├── biomedical_concept_recist_c25180.yaml │ ├── biomedical_concept_recist_c25285.yaml │ ├── biomedical_concept_recist_c35461.yaml │ ├── biomedical_concept_recist_c50995.yaml │ ├── biomedical_concept_recist_c82547.yaml │ ├── biomedical_concept_recist_c94189.yaml │ ├── biomedical_concept_recist_c94523.yaml │ ├── biomedical_concept_recist_c94525.yaml │ ├── biomedical_concept_recist_c94534.yaml │ ├── biomedical_concept_recist_c94535.yaml │ ├── biomedical_concept_recist_c96557.yaml │ ├── biomedical_concept_recist_c96613.yaml │ ├── biomedical_concept_recist_c96642.yaml │ ├── biomedical_concept_recist_c96643.yaml │ ├── biomedical_concept_recist_c96684.yaml │ └── biomedical_concept_recist_c96685.yaml └── sdtm │ ├── sdtm_bc_specialization_recist_rs_newlprog.yaml │ ├── sdtm_bc_specialization_recist_rs_ntrgresp.yaml │ ├── sdtm_bc_specialization_recist_rs_ovrlresp.yaml │ ├── sdtm_bc_specialization_recist_rs_trgresp.yaml │ ├── sdtm_bc_specialization_recist_tr_ldiam.yaml │ ├── sdtm_bc_specialization_recist_tr_lnstate.yaml │ ├── sdtm_bc_specialization_recist_tr_lperp.yaml │ ├── sdtm_bc_specialization_recist_tr_tumstate.yaml │ ├── sdtm_bc_specialization_recist_tu_ntind.yaml │ ├── sdtm_bc_specialization_recist_tu_tind.yaml │ ├── sdtm_bc_specialization_recist_tu_tumerge.yaml │ ├── sdtm_bc_specialization_recist_tu_tumident.yaml │ └── sdtm_bc_specialization_recist_tu_tusplit.yaml ├── 20231003_r5 ├── bc │ ├── biomedical_concept_ae_edits_c156629.yaml │ ├── biomedical_concept_ae_edits_c179175.yaml │ ├── biomedical_concept_ae_edits_c179176.yaml │ ├── biomedical_concept_ae_edits_c41331.yaml │ ├── biomedical_concept_cm_edits_c53630.yaml │ ├── biomedical_concept_ds_edits_c16735.yaml │ ├── biomedical_concept_ec_c117466.yaml │ ├── biomedical_concept_lb_c111207.yaml │ ├── biomedical_concept_lb_c170598.yaml │ ├── biomedical_concept_lb_c199683.yaml │ ├── biomedical_concept_lb_c200008.yaml │ ├── biomedical_concept_lb_c201227.yaml │ ├── biomedical_concept_lb_c35553.yaml │ ├── biomedical_concept_lb_c51950.yaml │ ├── biomedical_concept_lb_c64797.yaml │ ├── biomedical_concept_lb_c64798.yaml │ ├── biomedical_concept_lb_c64799.yaml │ ├── biomedical_concept_lb_c64803.yaml │ ├── biomedical_concept_lb_c64813.yaml │ ├── biomedical_concept_lb_c64817.yaml │ ├── biomedical_concept_lb_c64821.yaml │ ├── biomedical_concept_lb_c64822.yaml │ ├── biomedical_concept_lb_c64827.yaml │ ├── biomedical_concept_lb_c64830.yaml │ ├── biomedical_concept_lb_c64831.yaml │ ├── biomedical_concept_lb_c64847.yaml │ ├── biomedical_concept_lb_c64849.yaml │ ├── biomedical_concept_lb_c67208.yaml │ ├── biomedical_concept_lb_c74676.yaml │ ├── biomedical_concept_lb_c74742.yaml │ ├── biomedical_concept_lb_c74747.yaml │ ├── biomedical_concept_lb_c74748.yaml │ ├── biomedical_concept_lb_c74786.yaml │ ├── biomedical_concept_lb_c74797.yaml │ ├── biomedical_concept_lb_c74803.yaml │ ├── biomedical_concept_lb_c75385.yaml │ ├── biomedical_concept_lb_c79602.yaml │ ├── biomedical_concept_lb_c81997.yaml │ ├── biomedical_concept_lb_c82045.yaml │ ├── biomedical_concept_lb_edits_c105585.yaml │ ├── biomedical_concept_lb_edits_c125949.yaml │ ├── biomedical_concept_lb_edits_c139084.yaml │ ├── biomedical_concept_lb_edits_c147403.yaml │ ├── biomedical_concept_lb_edits_c200249.yaml │ ├── biomedical_concept_lb_edits_c38037.yaml │ ├── biomedical_concept_lb_edits_c63321.yaml │ ├── biomedical_concept_lb_edits_c64431.yaml │ ├── biomedical_concept_lb_edits_c64488.yaml │ ├── biomedical_concept_lb_edits_c64547.yaml │ ├── biomedical_concept_lb_edits_c64548.yaml │ ├── biomedical_concept_lb_edits_c64814.yaml │ ├── biomedical_concept_lb_edits_c64857.yaml │ ├── biomedical_concept_lb_edits_c73495.yaml │ ├── biomedical_concept_lb_edits_c74737.yaml │ ├── biomedical_concept_lb_edits_c92249.yaml │ ├── biomedical_concept_mb_c132388.yaml │ ├── biomedical_concept_mb_c154812.yaml │ ├── biomedical_concept_mb_c16723.yaml │ ├── biomedical_concept_mb_c184647.yaml │ ├── biomedical_concept_mb_c198341.yaml │ ├── biomedical_concept_mh_edits_c200145.yaml │ ├── biomedical_concept_pr_edits_c17204.yaml │ └── biomedical_concept_pr_edits_c38101.yaml └── sdtm │ ├── sdtm_bc_specialization_ae_edits_ae.yaml │ ├── sdtm_bc_specialization_ae_edits_aepresp.yaml │ ├── sdtm_bc_specialization_cm_cmfree.yaml │ ├── sdtm_bc_specialization_ds_edits_consent.yaml │ ├── sdtm_bc_specialization_ec_exposcoll.yaml │ ├── sdtm_bc_specialization_ec_exposcoll_xanomelineplacebo.yaml │ ├── sdtm_bc_specialization_lb_anisobld.yaml │ ├── sdtm_bc_specialization_lb_edits_albserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_alburin.yaml │ ├── sdtm_bc_specialization_lb_edits_biliserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_biliurin.yaml │ ├── sdtm_bc_specialization_lb_edits_cabld.yaml │ ├── sdtm_bc_specialization_lb_edits_caserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_cmonoxbld.yaml │ ├── sdtm_bc_specialization_lb_edits_cmonoxexpair.yaml │ ├── sdtm_bc_specialization_lb_edits_cotinineurin.yaml │ ├── sdtm_bc_specialization_lb_edits_creatserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_creaturin.yaml │ ├── sdtm_bc_specialization_lb_edits_crpserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_ferritinserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_glucbld.yaml │ ├── sdtm_bc_specialization_lb_edits_glucpl.yaml │ ├── sdtm_bc_specialization_lb_edits_glucser.yaml │ ├── sdtm_bc_specialization_lb_edits_glucurin.yaml │ ├── sdtm_bc_specialization_lb_edits_hcgcnctserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_nicotineserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_nicotineurin.yaml │ ├── sdtm_bc_specialization_lb_edits_phosserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_urateserpl.yaml │ ├── sdtm_bc_specialization_lb_edits_ureanserpl.yaml │ ├── sdtm_bc_specialization_lb_ggtserpl.yaml │ ├── sdtm_bc_specialization_lb_hba1cbld.yaml │ ├── sdtm_bc_specialization_lb_hba1chgbbld.yaml │ ├── sdtm_bc_specialization_lb_macrocybld.yaml │ ├── sdtm_bc_specialization_lb_macrocyurnsed.yaml │ ├── sdtm_bc_specialization_lb_mch.yaml │ ├── sdtm_bc_specialization_lb_mchc.yaml │ ├── sdtm_bc_specialization_lb_mcv.yaml │ ├── sdtm_bc_specialization_lb_microcybld.yaml │ ├── sdtm_bc_specialization_lb_microcyrbc.yaml │ ├── sdtm_bc_specialization_lb_microcyurn.yaml │ ├── sdtm_bc_specialization_lb_microcyurnsed.yaml │ ├── sdtm_bc_specialization_lb_neutbbld.yaml │ ├── sdtm_bc_specialization_lb_neutbld.yaml │ ├── sdtm_bc_specialization_lb_neutblebld.yaml │ ├── sdtm_bc_specialization_lb_neutlebld.yaml │ ├── sdtm_bc_specialization_lb_neutsgbld.yaml │ ├── sdtm_bc_specialization_lb_neutsglebld.yaml │ ├── sdtm_bc_specialization_lb_poikilobld.yaml │ ├── sdtm_bc_specialization_lb_polychrbld.yaml │ ├── sdtm_bc_specialization_lb_t3serpl.yaml │ ├── sdtm_bc_specialization_lb_t3upserpl.yaml │ ├── sdtm_bc_specialization_lb_t4fridxserpl.yaml │ ├── sdtm_bc_specialization_lb_t4frserpl.yaml │ ├── sdtm_bc_specialization_lb_tshbld.yaml │ ├── sdtm_bc_specialization_lb_tshserpl.yaml │ ├── sdtm_bc_specialization_lb_vitb12bld.yaml │ ├── sdtm_bc_specialization_lb_vitb12serpl.yaml │ ├── sdtm_bc_specialization_lb_vitb9bld.yaml │ ├── sdtm_bc_specialization_lb_vitb9serpl.yaml │ ├── sdtm_bc_specialization_mb_tpa.yaml │ ├── sdtm_bc_specialization_mb_tpadna.yaml │ ├── sdtm_bc_specialization_mb_tplab.yaml │ ├── sdtm_bc_specialization_mh_medhistfree.yaml │ ├── sdtm_bc_specialization_mh_mhalzheimers.yaml │ ├── sdtm_bc_specialization_pr_edits_ctscanchest.yaml │ └── sdtm_bc_specialization_pr_edits_xraychest.yaml ├── 20231212_r6 ├── bc │ ├── biomedical_concept_cm_edits_c53630.yaml │ ├── biomedical_concept_ds_c105448.yaml │ ├── biomedical_concept_ds_c106576.yaml │ ├── biomedical_concept_ds_c114209.yaml │ ├── biomedical_concept_ds_c132447.yaml │ ├── biomedical_concept_ds_c139236.yaml │ ├── biomedical_concept_ds_c142742.yaml │ ├── biomedical_concept_ds_c161410.yaml │ ├── biomedical_concept_ds_c16735.yaml │ ├── biomedical_concept_ds_c170610.yaml │ ├── biomedical_concept_ds_c186208.yaml │ ├── biomedical_concept_ds_c191656.yaml │ ├── biomedical_concept_ds_c25250.yaml │ ├── biomedical_concept_ds_c28554.yaml │ ├── biomedical_concept_ds_c35571.yaml │ ├── biomedical_concept_ds_c41331.yaml │ ├── biomedical_concept_ds_c48226.yaml │ ├── biomedical_concept_ds_c48227.yaml │ ├── biomedical_concept_ds_c48250.yaml │ ├── biomedical_concept_ds_c49628.yaml │ ├── biomedical_concept_ds_c49632.yaml │ ├── biomedical_concept_ds_c49634.yaml │ ├── biomedical_concept_ds_c50996.yaml │ ├── biomedical_concept_eg_edits_c111131.yaml │ ├── biomedical_concept_eg_edits_c111132.yaml │ ├── biomedical_concept_eg_edits_c111155.yaml │ ├── biomedical_concept_eg_edits_c111238.yaml │ ├── biomedical_concept_eg_edits_c111280.yaml │ ├── biomedical_concept_eg_edits_c111285.yaml │ ├── biomedical_concept_eg_edits_c111307.yaml │ ├── biomedical_concept_eg_edits_c111312.yaml │ ├── biomedical_concept_eg_edits_c111320.yaml │ ├── biomedical_concept_eg_edits_c111321.yaml │ ├── biomedical_concept_eg_edits_c111330.yaml │ ├── biomedical_concept_eg_edits_c111331.yaml │ ├── biomedical_concept_eg_edits_c111363.yaml │ ├── biomedical_concept_eg_edits_c117773.yaml │ ├── biomedical_concept_eg_edits_c117779.yaml │ ├── biomedical_concept_eg_edits_c117783.yaml │ ├── biomedical_concept_eg_edits_c117784.yaml │ ├── biomedical_concept_eg_edits_c117786.yaml │ ├── biomedical_concept_eg_edits_c117791.yaml │ ├── biomedical_concept_eg_edits_c117807.yaml │ ├── biomedical_concept_eg_edits_c118165.yaml │ ├── biomedical_concept_eg_edits_c119259.yaml │ ├── biomedical_concept_eg_edits_c174285.yaml │ ├── biomedical_concept_eg_edits_c181655.yaml │ ├── biomedical_concept_ex_c177924.yaml │ ├── biomedical_concept_ie_c16112.yaml │ ├── biomedical_concept_ie_c25370.yaml │ ├── biomedical_concept_ie_c25532.yaml │ ├── biomedical_concept_lb_c147390.yaml │ ├── biomedical_concept_lb_c158424.yaml │ ├── biomedical_concept_lb_c45997.yaml │ ├── biomedical_concept_lb_c60819.yaml │ ├── biomedical_concept_lb_c64546.yaml │ ├── biomedical_concept_lb_c64810.yaml │ ├── biomedical_concept_lb_c64816.yaml │ ├── biomedical_concept_lb_c64832.yaml │ ├── biomedical_concept_lb_c64854.yaml │ ├── biomedical_concept_lb_c74686.yaml │ ├── biomedical_concept_lb_c74957.yaml │ ├── biomedical_concept_lb_edits_c127127.yaml │ ├── biomedical_concept_lb_edits_c147355.yaml │ ├── biomedical_concept_lb_edits_c44414.yaml │ ├── biomedical_concept_lb_edits_c64858.yaml │ ├── biomedical_concept_lb_edits_c74954.yaml │ ├── biomedical_concept_lb_edits_c96591.yaml │ ├── biomedical_concept_mh_edits_c200145.yaml │ ├── biomedical_concept_pr_c16809.yaml │ ├── biomedical_concept_pr_c17204.yaml │ ├── biomedical_concept_pr_c38101.yaml │ ├── biomedical_concept_qs_new_lzzt.yaml │ ├── biomedical_concept_qs_new_lzzt1.yaml │ ├── biomedical_concept_qs_new_lzzt2.yaml │ ├── biomedical_concept_qs_new_lzzt3.yaml │ ├── biomedical_concept_qs_new_lzzt4.yaml │ ├── biomedical_concept_sc_c122393.yaml │ ├── biomedical_concept_sc_c17468.yaml │ ├── biomedical_concept_sc_c17953.yaml │ ├── biomedical_concept_su_c181760.yaml │ ├── biomedical_concept_su_c201990.yaml │ ├── biomedical_concept_su_c81229.yaml │ ├── biomedical_concept_vs_edits_c100948.yaml │ ├── biomedical_concept_vs_edits_c16358.yaml │ ├── biomedical_concept_vs_edits_c164634.yaml │ ├── biomedical_concept_vs_edits_c174446.yaml │ ├── biomedical_concept_vs_edits_c25298.yaml │ ├── biomedical_concept_vs_edits_c25299.yaml │ ├── biomedical_concept_vs_edits_c49672.yaml │ ├── biomedical_concept_vs_edits_c49676.yaml │ ├── biomedical_concept_vs_edits_c49677.yaml │ ├── biomedical_concept_vs_edits_c49678.yaml │ ├── biomedical_concept_vs_edits_c49680.yaml │ ├── biomedical_concept_vs_edits_c54706.yaml │ ├── biomedical_concept_vs_edits_c60832.yaml │ └── biomedical_concept_vs_edits_c81328.yaml └── sdtm │ ├── sdtm_bc_specialization_cm_edits_cmfree.yaml │ ├── sdtm_bc_specialization_ds_advevent.yaml │ ├── sdtm_bc_specialization_ds_consent.yaml │ ├── sdtm_bc_specialization_ds_conswdrl.yaml │ ├── sdtm_bc_specialization_ds_dead.yaml │ ├── sdtm_bc_specialization_ds_eligmet.yaml │ ├── sdtm_bc_specialization_ds_failcont.yaml │ ├── sdtm_bc_specialization_ds_failrand.yaml │ ├── sdtm_bc_specialization_ds_lackefficacy.yaml │ ├── sdtm_bc_specialization_ds_ltfup.yaml │ ├── sdtm_bc_specialization_ds_phydecision.yaml │ ├── sdtm_bc_specialization_ds_progdisease.yaml │ ├── sdtm_bc_specialization_ds_protcomp.yaml │ ├── sdtm_bc_specialization_ds_protdev.yaml │ ├── sdtm_bc_specialization_ds_sitetransfer.yaml │ ├── sdtm_bc_specialization_ds_subjpreg.yaml │ ├── sdtm_bc_specialization_ds_subjwithdraw.yaml │ ├── sdtm_bc_specialization_ds_unblind.yaml │ ├── sdtm_bc_specialization_eg_edits_avcond.yaml │ ├── sdtm_bc_specialization_eg_edits_axisvolt.yaml │ ├── sdtm_bc_specialization_eg_edits_chyptenl.yaml │ ├── sdtm_bc_specialization_eg_edits_eghrmn.yaml │ ├── sdtm_bc_specialization_eg_edits_egintp.yaml │ ├── sdtm_bc_specialization_eg_edits_ivtiacd.yaml │ ├── sdtm_bc_specialization_eg_edits_pacemakr.yaml │ ├── sdtm_bc_specialization_eg_edits_prag.yaml │ ├── sdtm_bc_specialization_eg_edits_qrs_axis.yaml │ ├── sdtm_bc_specialization_eg_edits_qrsag.yaml │ ├── sdtm_bc_specialization_eg_edits_qtag.yaml │ ├── sdtm_bc_specialization_eg_edits_qtcbag.yaml │ ├── sdtm_bc_specialization_eg_edits_qtcfag.yaml │ ├── sdtm_bc_specialization_eg_edits_qtcunsag.yaml │ ├── sdtm_bc_specialization_eg_edits_rhynos.yaml │ ├── sdtm_bc_specialization_eg_edits_rrag.yaml │ ├── sdtm_bc_specialization_eg_edits_snrarry.yaml │ ├── sdtm_bc_specialization_eg_edits_sprarry.yaml │ ├── sdtm_bc_specialization_eg_edits_sprtarry.yaml │ ├── sdtm_bc_specialization_eg_edits_ststwuw.yaml │ ├── sdtm_bc_specialization_eg_edits_techqual.yaml │ ├── sdtm_bc_specialization_eg_edits_vtarry.yaml │ ├── sdtm_bc_specialization_eg_edits_vttarry.yaml │ ├── sdtm_bc_specialization_ex_exposureunblind.yaml │ ├── sdtm_bc_specialization_ie_excl01.yaml │ ├── sdtm_bc_specialization_ie_incl01.yaml │ ├── sdtm_bc_specialization_lb_alburinpres.yaml │ ├── sdtm_bc_specialization_lb_biliurinpres.yaml │ ├── sdtm_bc_specialization_lb_colorurin.yaml │ ├── sdtm_bc_specialization_lb_edits_co2bld.yaml │ ├── sdtm_bc_specialization_lb_edits_co2serpl.yaml │ ├── sdtm_bc_specialization_lb_edits_glucua.yaml │ ├── sdtm_bc_specialization_lb_edits_sodiumurin.yaml │ ├── sdtm_bc_specialization_lb_glucurinpres.yaml │ ├── sdtm_bc_specialization_lb_ketonesurin.yaml │ ├── sdtm_bc_specialization_lb_ketonesurinpres.yaml │ ├── sdtm_bc_specialization_lb_macroblurinpres.yaml │ ├── sdtm_bc_specialization_lb_nitriteurin.yaml │ ├── sdtm_bc_specialization_lb_nitriteurinpres.yaml │ ├── sdtm_bc_specialization_lb_occbldstool.yaml │ ├── sdtm_bc_specialization_lb_phurin.yaml │ ├── sdtm_bc_specialization_lb_proturin.yaml │ ├── sdtm_bc_specialization_lb_proturinpres.yaml │ ├── sdtm_bc_specialization_lb_spgravurin.yaml │ ├── sdtm_bc_specialization_lb_urobilurin.yaml │ ├── sdtm_bc_specialization_lb_urobilurinpres.yaml │ ├── sdtm_bc_specialization_mh_mhalzheimers.yaml │ ├── sdtm_bc_specialization_mh_mhconfusionalepisodes.yaml │ ├── sdtm_bc_specialization_mh_mhessentialtremor.yaml │ ├── sdtm_bc_specialization_mh_mhessentialtremorexpyr.yaml │ ├── sdtm_bc_specialization_mh_mhextrapyramidal.yaml │ ├── sdtm_bc_specialization_mh_mhfacialmasking.yaml │ ├── sdtm_bc_specialization_mh_mhrigidityupperextremity.yaml │ ├── sdtm_bc_specialization_mh_mhsensitivityneuroleptics.yaml │ ├── sdtm_bc_specialization_mh_mhvisualhallucinations.yaml │ ├── sdtm_bc_specialization_pr_ctscanchest.yaml │ ├── sdtm_bc_specialization_pr_mribrain.yaml │ ├── sdtm_bc_specialization_pr_xraychest.yaml │ ├── sdtm_bc_specialization_qs_patchsurveyacceptability.yaml │ ├── sdtm_bc_specialization_qs_patchsurveyappearance.yaml │ ├── sdtm_bc_specialization_qs_patchsurveydurability.yaml │ ├── sdtm_bc_specialization_qs_patchsurveysize.yaml │ ├── sdtm_bc_specialization_sc_edulevel.yaml │ ├── sdtm_bc_specialization_sc_eduyrnum.yaml │ ├── sdtm_bc_specialization_su_alcoholhx.yaml │ ├── sdtm_bc_specialization_su_beerhx.yaml │ ├── sdtm_bc_specialization_su_caffeinehx.yaml │ ├── sdtm_bc_specialization_su_cigarettehx.yaml │ ├── sdtm_bc_specialization_su_cigarhx.yaml │ ├── sdtm_bc_specialization_su_coffeehx.yaml │ ├── sdtm_bc_specialization_su_colahx.yaml │ ├── sdtm_bc_specialization_su_distilledspiritshx.yaml │ ├── sdtm_bc_specialization_su_pipehx.yaml │ ├── sdtm_bc_specialization_su_teahix.yaml │ ├── sdtm_bc_specialization_su_tobaccohx.yaml │ ├── sdtm_bc_specialization_su_winehx.yaml │ ├── sdtm_bc_specialization_vs_edits_bmi.yaml │ ├── sdtm_bc_specialization_vs_edits_diabp.yaml │ ├── sdtm_bc_specialization_vs_edits_frmsize.yaml │ ├── sdtm_bc_specialization_vs_edits_height.yaml │ ├── sdtm_bc_specialization_vs_edits_hr.yaml │ ├── sdtm_bc_specialization_vs_edits_oxysat.yaml │ ├── sdtm_bc_specialization_vs_edits_pulse.yaml │ ├── sdtm_bc_specialization_vs_edits_resp.yaml │ ├── sdtm_bc_specialization_vs_edits_sysbp.yaml │ ├── sdtm_bc_specialization_vs_edits_temp.yaml │ ├── sdtm_bc_specialization_vs_edits_weight.yaml │ └── sdtm_bc_specialization_vs_edits_wstcir.yaml ├── 20240402_r7 ├── bc │ ├── biomedical_concept_bc_dd_c116142.yaml │ ├── biomedical_concept_bc_dd_c124331.yaml │ ├── biomedical_concept_bc_dd_c135383.yaml │ ├── biomedical_concept_bc_dd_c135384.yaml │ ├── biomedical_concept_bc_dd_c135385.yaml │ ├── biomedical_concept_bc_dd_c135386.yaml │ ├── biomedical_concept_bc_dd_c170571.yaml │ ├── biomedical_concept_bc_dd_c174284.yaml │ ├── biomedical_concept_bc_dd_c176287.yaml │ ├── biomedical_concept_bc_dd_c184505.yaml │ ├── biomedical_concept_bc_dd_c198258.yaml │ ├── biomedical_concept_bc_dd_c199843.yaml │ ├── biomedical_concept_bc_dd_c25150.yaml │ ├── biomedical_concept_bc_dd_c25180.yaml │ ├── biomedical_concept_bc_dd_c25341.yaml │ ├── biomedical_concept_bc_dd_c25683.yaml │ ├── biomedical_concept_bc_dd_c81239.yaml │ ├── biomedical_concept_bc_dd_c93546.yaml │ ├── biomedical_concept_bc_dd_c93565.yaml │ ├── biomedical_concept_bc_dd_c99531.yaml │ ├── biomedical_concept_bc_facv_c111095.yaml │ ├── biomedical_concept_bc_facv_c118936.yaml │ ├── biomedical_concept_bc_facv_c119229.yaml │ ├── biomedical_concept_bc_facv_c119231.yaml │ ├── biomedical_concept_bc_facv_c119232.yaml │ ├── biomedical_concept_bc_facv_c119233.yaml │ ├── biomedical_concept_bc_facv_c119234.yaml │ ├── biomedical_concept_bc_facv_c119236.yaml │ ├── biomedical_concept_bc_facv_c119238.yaml │ ├── biomedical_concept_bc_facv_c119239.yaml │ ├── biomedical_concept_bc_facv_c119579.yaml │ ├── biomedical_concept_bc_facv_c123424.yaml │ ├── biomedical_concept_bc_facv_c123443.yaml │ ├── biomedical_concept_bc_facv_c25284.yaml │ ├── biomedical_concept_bc_facv_c35552.yaml │ ├── biomedical_concept_bc_facv_c36292.yaml │ ├── biomedical_concept_bc_facv_c4876.yaml │ ├── biomedical_concept_bc_facv_c77140.yaml │ ├── biomedical_concept_bc_facv_c83119.yaml │ ├── biomedical_concept_bc_gf_c17208.yaml │ ├── biomedical_concept_bc_gf_c17248.yaml │ ├── biomedical_concept_bc_gf_c181330.yaml │ ├── biomedical_concept_bc_gf_c181331.yaml │ ├── biomedical_concept_bc_gf_c181332.yaml │ ├── biomedical_concept_bc_gf_c181333.yaml │ ├── biomedical_concept_bc_gf_c181334.yaml │ ├── biomedical_concept_bc_gf_c181335.yaml │ ├── biomedical_concept_bc_gf_c18302.yaml │ ├── biomedical_concept_bc_gf_c189439.yaml │ ├── biomedical_concept_bc_gf_c189440.yaml │ ├── biomedical_concept_bc_gf_c189441.yaml │ ├── biomedical_concept_bc_gf_c21049.yaml │ ├── biomedical_concept_bc_gf_c28614.yaml │ ├── biomedical_concept_bc_gf_c63331.yaml │ ├── biomedical_concept_bc_gf_c63479.yaml │ ├── biomedical_concept_bc_updates_c139084.yaml │ └── biomedical_concept_bc_updates_c170598.yaml └── sdtm │ ├── sdtm_bc_specialization_sdtm_dd_agedth.yaml │ ├── sdtm_bc_specialization_sdtm_dd_autopind.yaml │ ├── sdtm_bc_specialization_sdtm_dd_cuscdind.yaml │ ├── sdtm_bc_specialization_sdtm_dd_dthcoind.yaml │ ├── sdtm_bc_specialization_sdtm_dd_dthexind.yaml │ ├── sdtm_bc_specialization_sdtm_dd_dthwind.yaml │ ├── sdtm_bc_specialization_sdtm_dd_hmroind.yaml │ ├── sdtm_bc_specialization_sdtm_dd_hsdthind.yaml │ ├── sdtm_bc_specialization_sdtm_dd_infoscod.yaml │ ├── sdtm_bc_specialization_sdtm_dd_locdth.yaml │ ├── sdtm_bc_specialization_sdtm_dd_prcdth.yaml │ ├── sdtm_bc_specialization_sdtm_dd_sdthind.yaml │ ├── sdtm_bc_specialization_sdtm_dd_secdth.yaml │ ├── sdtm_bc_specialization_sdtm_facv_acmitype.yaml │ ├── sdtm_bc_specialization_sdtm_facv_catmthid.yaml │ ├── sdtm_bc_specialization_sdtm_facv_hetype.yaml │ ├── sdtm_bc_specialization_sdtm_facv_hflbfnw.yaml │ ├── sdtm_bc_specialization_sdtm_facv_hfpefnw.yaml │ ├── sdtm_bc_specialization_sdtm_facv_hftherin.yaml │ ├── sdtm_bc_specialization_sdtm_facv_iscetyp.yaml │ ├── sdtm_bc_specialization_sdtm_facv_ninvimgc.yaml │ ├── sdtm_bc_specialization_sdtm_facv_nwsymp.yaml │ ├── sdtm_bc_specialization_sdtm_facv_pciaac.yaml │ ├── sdtm_bc_specialization_sdtm_facv_stctimng.yaml │ ├── sdtm_bc_specialization_sdtm_facv_stroktyp.yaml │ ├── sdtm_bc_specialization_sdtm_gf_cpnumvaraltexon.yaml │ ├── sdtm_bc_specialization_sdtm_gf_cpnumvaratio.yaml │ ├── sdtm_bc_specialization_sdtm_gf_cpnumvarintp.yaml │ ├── sdtm_bc_specialization_sdtm_gf_cpnumvarnumgcpy.yaml │ ├── sdtm_bc_specialization_sdtm_gf_genesigintp.yaml │ ├── sdtm_bc_specialization_sdtm_gf_genesigscore.yaml │ ├── sdtm_bc_specialization_sdtm_gf_micristbdetect.yaml │ ├── sdtm_bc_specialization_sdtm_gf_micristbovrastat.yaml │ ├── sdtm_bc_specialization_sdtm_gf_seqreareaddepth.yaml │ ├── sdtm_bc_specialization_sdtm_gf_seqreargene1.yaml │ ├── sdtm_bc_specialization_sdtm_gf_seqreargene2.yaml │ ├── sdtm_bc_specialization_sdtm_gf_seqrearimpclass.yaml │ ├── sdtm_bc_specialization_sdtm_gf_seqrearpreinfrind.yaml │ ├── sdtm_bc_specialization_sdtm_gf_seqreartype.yaml │ ├── sdtm_bc_specialization_sdtm_gf_shrtvareadepth.yaml │ ├── sdtm_bc_specialization_sdtm_gf_shrtvareadepthrd.yaml │ ├── sdtm_bc_specialization_sdtm_gf_shrtvarimpclass.yaml │ ├── sdtm_bc_specialization_sdtm_gf_shrtvarpramachg.yaml │ ├── sdtm_bc_specialization_sdtm_gf_shrtvarprcseqchg.yaml │ ├── sdtm_bc_specialization_sdtm_gf_snvgenotype.yaml │ ├── sdtm_bc_specialization_sdtm_gf_snvpramachg.yaml │ ├── sdtm_bc_specialization_sdtm_gf_snvprcseqchg.yaml │ ├── sdtm_bc_specialization_sdtm_gf_snvreadepth.yaml │ ├── sdtm_bc_specialization_sdtm_gf_snvvareadepthrd.yaml │ ├── sdtm_bc_specialization_sdtm_gf_snvvarimpclass.yaml │ ├── sdtm_bc_specialization_sdtm_gf_tmbnormnumseqvar.yaml │ ├── sdtm_bc_specialization_sdtm_gf_tmbnumseqvar.yaml │ ├── sdtm_bc_specialization_sdtm_gf_tmbvarseqburdintp.yaml │ ├── sdtm_bc_specialization_sdtm_gf_trnscptnfragcnt.yaml │ ├── sdtm_bc_specialization_sdtm_gf_trnscptngentrnind.yaml │ ├── sdtm_bc_specialization_sdtm_gf_trnscptnnormlvl.yaml │ ├── sdtm_bc_specialization_sdtm_gf_trnscptnnormlvldiff.yaml │ ├── sdtm_bc_specialization_sdtm_gf_trnscptnpercntrank.yaml │ ├── sdtm_bc_specialization_sdtm_gf_varprofprdiplo.yaml │ ├── sdtm_bc_specialization_sdtm_gf_varprofprpheno.yaml │ ├── sdtm_bc_specialization_sdtm_gf_vntrncagrpt.yaml │ ├── sdtm_bc_specialization_sdtm_gf_vntrnuclseq.yaml │ ├── sdtm_bc_specialization_sdtm_gf_vntrpncagrpt.yaml │ ├── sdtm_bc_specialization_sdtm_updates_cmonoxexpair.yaml │ ├── sdtm_bc_specialization_sdtm_updates_hctbld.yaml │ ├── sdtm_bc_specialization_sdtm_updates_microcyrbc.yaml │ ├── sdtm_bc_specialization_sdtm_updates_po2fio2arterial.yaml │ └── sdtm_bc_specialization_sdtm_updates_t4fridxserpl.yaml ├── 20240627_r8 ├── bc │ ├── bc_c103420_updates1.yaml │ ├── bc_c105586_updates2.yaml │ ├── bc_c105587_updates2.yaml │ ├── bc_c105588_updates2.yaml │ ├── bc_c105589_updates2.yaml │ ├── bc_c123623_rs_lugano.yaml │ ├── bc_c123627_rs_rano.yaml │ ├── bc_c124448_updates1.yaml │ ├── bc_c135477_rs_lugano.yaml │ ├── bc_c135478_rs_rano.yaml │ ├── bc_c135480_rs_rano.yaml │ ├── bc_c135481_rs_rano.yaml │ ├── bc_c135482_rs_lugano.yaml │ ├── bc_c135483_rs_rano.yaml │ ├── bc_c142362_rs_lugano.yaml │ ├── bc_c156564_rs_lugano.yaml │ ├── bc_c161483_updates1.yaml │ ├── bc_c171082_rs_rano.yaml │ ├── bc_c178053_updates1.yaml │ ├── bc_c181043_rs_lugano.yaml │ ├── bc_c50995_rs_lugano.yaml │ ├── bc_c64812_updates2.yaml │ ├── bc_c74949_updates2.yaml │ ├── bc_c83430_rs_rano.yaml │ ├── bc_c94523_updates1.yaml │ ├── bc_c94525_updates1.yaml │ ├── bc_c94534_updates1.yaml │ ├── bc_c94535_updates1.yaml │ ├── bc_c94536_updates2.yaml │ ├── bc_c96613_updates1.yaml │ ├── bc_c96642_updates1.yaml │ ├── bc_c96643_updates1.yaml │ ├── bc_c96684_updates1.yaml │ └── bc_c96685_updates1.yaml └── sdtm │ ├── sdtm_acmitype.yaml │ ├── sdtm_agedth.yaml │ ├── sdtm_anatresp_lugano.yaml │ ├── sdtm_autopind.yaml │ ├── sdtm_bestresp.yaml │ ├── sdtm_bmivlind_lugano.yaml │ ├── sdtm_catmthid.yaml │ ├── sdtm_cholserpl.yaml │ ├── sdtm_colorurin.yaml │ ├── sdtm_cpnumvaraltexon.yaml │ ├── sdtm_cpnumvaratio.yaml │ ├── sdtm_cpnumvarintp.yaml │ ├── sdtm_cpnumvarnumgcpy.yaml │ ├── sdtm_cprfstat_rano.yaml │ ├── sdtm_cuscdind.yaml │ ├── sdtm_dthcoind.yaml │ ├── sdtm_dthexind.yaml │ ├── sdtm_dthwind.yaml │ ├── sdtm_edulevel.yaml │ ├── sdtm_eduyrnum.yaml │ ├── sdtm_excl01.yaml │ ├── sdtm_genesigintp.yaml │ ├── sdtm_genesigscore.yaml │ ├── sdtm_hctbld.yaml │ ├── sdtm_hdlserpl.yaml │ ├── sdtm_hetype.yaml │ ├── sdtm_hflbfnw.yaml │ ├── sdtm_hfpefnw.yaml │ ├── sdtm_hftherin.yaml │ ├── sdtm_hmroind.yaml │ ├── sdtm_hsdthind.yaml │ ├── sdtm_incl01.yaml │ ├── sdtm_infoscod.yaml │ ├── sdtm_iscetyp.yaml │ ├── sdtm_ketonesurin.yaml │ ├── sdtm_ketonesurinpres.yaml │ ├── sdtm_ldiam.yaml │ ├── sdtm_ldlserpl.yaml │ ├── sdtm_lnstate.yaml │ ├── sdtm_locdth.yaml │ ├── sdtm_lperp.yaml │ ├── sdtm_macroblurinpres.yaml │ ├── sdtm_mchc.yaml │ ├── sdtm_metbresp_lugano.yaml │ ├── sdtm_micristbdetect.yaml │ ├── sdtm_micristbovrastat.yaml │ ├── sdtm_microcybld.yaml │ ├── sdtm_microcyrbc.yaml │ ├── sdtm_neutblebld.yaml │ ├── sdtm_neutlebld.yaml │ ├── sdtm_neutsglebld.yaml │ ├── sdtm_newlind_lugano.yaml │ ├── sdtm_newlind_rano.yaml │ ├── sdtm_newlprog.yaml │ ├── sdtm_ninvimgc.yaml │ ├── sdtm_nitriteurin.yaml │ ├── sdtm_nitriteurinpres.yaml │ ├── sdtm_nteresp_rano.yaml │ ├── sdtm_ntind.yaml │ ├── sdtm_ntneresp_rano.yaml │ ├── sdtm_ntrgresp.yaml │ ├── sdtm_ntrgresp_lugano.yaml │ ├── sdtm_nwsymp.yaml │ ├── sdtm_occbldstool.yaml │ ├── sdtm_ovrlresp.yaml │ ├── sdtm_ovrlresp_lugano.yaml │ ├── sdtm_ovrlresp_rano.yaml │ ├── sdtm_oxysat.yaml │ ├── sdtm_patchsurveyacceptability.yaml │ ├── sdtm_patchsurveyappearance.yaml │ ├── sdtm_patchsurveydurability.yaml │ ├── sdtm_patchsurveysize.yaml │ ├── sdtm_pciaac.yaml │ ├── sdtm_po2fio2arterial.yaml │ ├── sdtm_prcdth.yaml │ ├── sdtm_proturin.yaml │ ├── sdtm_proturinpres.yaml │ ├── sdtm_rdioresp_rano.yaml │ ├── sdtm_sar2rnaqntcyc.yaml │ ├── sdtm_sar2rnaviral.yaml │ ├── sdtm_sarscov2det.yaml │ ├── sdtm_sdthind.yaml │ ├── sdtm_secdth.yaml │ ├── sdtm_seqreareaddepth.yaml │ ├── sdtm_seqreargene1.yaml │ ├── sdtm_seqreargene2.yaml │ ├── sdtm_seqrearimpclass.yaml │ ├── sdtm_seqrearpreinfrind.yaml │ ├── sdtm_seqreartype.yaml │ ├── sdtm_shrtvareadepth.yaml │ ├── sdtm_shrtvareadepthrd.yaml │ ├── sdtm_shrtvarimpclass.yaml │ ├── sdtm_shrtvarpramachg.yaml │ ├── sdtm_shrtvarprcseqchg.yaml │ ├── sdtm_snvgenotype.yaml │ ├── sdtm_snvpramachg.yaml │ ├── sdtm_snvprcseqchg.yaml │ ├── sdtm_snvreadepth.yaml │ ├── sdtm_snvvareadepthrd.yaml │ ├── sdtm_snvvarimpclass.yaml │ ├── sdtm_splnresp_lugano.yaml │ ├── sdtm_stctimng.yaml │ ├── sdtm_stroktyp.yaml │ ├── sdtm_strustat_rano.yaml │ ├── sdtm_t3upserpl.yaml │ ├── sdtm_t4frserpl.yaml │ ├── sdtm_tind.yaml │ ├── sdtm_tmbnormnumseqvar.yaml │ ├── sdtm_tmbnumseqvar.yaml │ ├── sdtm_tmbvarseqburdintp.yaml │ ├── sdtm_trgresp.yaml │ ├── sdtm_trgresp_lugano.yaml │ ├── sdtm_trgresp_rano.yaml │ ├── sdtm_trigserpl.yaml │ ├── sdtm_trnscptnfragcnt.yaml │ ├── sdtm_trnscptngentrnind.yaml │ ├── sdtm_trnscptnnormlvl.yaml │ ├── sdtm_trnscptnnormlvldiff.yaml │ ├── sdtm_trnscptnpercntrank.yaml │ ├── sdtm_tumerge.yaml │ ├── sdtm_tumident.yaml │ ├── sdtm_tumstate.yaml │ ├── sdtm_tusplit.yaml │ ├── sdtm_urobilurin.yaml │ ├── sdtm_urobilurinpres.yaml │ ├── sdtm_varprofprdiplo.yaml │ ├── sdtm_varprofprpheno.yaml │ ├── sdtm_vldlserpl.yaml │ ├── sdtm_vntrncagrpt.yaml │ ├── sdtm_vntrnuclseq.yaml │ └── sdtm_vntrpncagrpt.yaml ├── 20241216_r9 ├── bc │ ├── bc_c100948_pr_updates.yaml │ ├── bc_c116142_pr_updates.yaml │ ├── bc_c117791_pr_updates.yaml │ ├── bc_c118936_pr_updates.yaml │ ├── bc_c119229_pr_updates.yaml │ ├── bc_c119231_pr_updates.yaml │ ├── bc_c119232_pr_updates.yaml │ ├── bc_c119233_pr_updates.yaml │ ├── bc_c119234_pr_updates.yaml │ ├── bc_c119236_pr_updates.yaml │ ├── bc_c119238_pr_updates.yaml │ ├── bc_c119239_pr_updates.yaml │ ├── bc_c119579_pr_updates.yaml │ ├── bc_c123424_pr_updates.yaml │ ├── bc_c124331_pr_updates.yaml │ ├── bc_c132388_pr_updates.yaml │ ├── bc_c135383_pr_updates.yaml │ ├── bc_c135385_pr_updates.yaml │ ├── bc_c135386_pr_updates.yaml │ ├── bc_c16358_pr_updates.yaml │ ├── bc_c164634_pr_updates.yaml │ ├── bc_c170571_pr_updates.yaml │ ├── bc_c171439_pr_updates.yaml │ ├── bc_c171521_pr_updates.yaml │ ├── bc_c171531_pr_updates.yaml │ ├── bc_c171532_pr_updates.yaml │ ├── bc_c174284_pr_updates.yaml │ ├── bc_c174446_pr_updates.yaml │ ├── bc_c176287_pr_updates.yaml │ ├── bc_c184505_pr_updates.yaml │ ├── bc_c184647_pr_updates.yaml │ ├── bc_c198258_pr_updates.yaml │ ├── bc_c198341_pr_updates.yaml │ ├── bc_c199843_pr_updates.yaml │ ├── bc_c210010_pr_updates.yaml │ ├── bc_c25208_pr_updates.yaml │ ├── bc_c25298_pr_updates.yaml │ ├── bc_c25299_pr_updates.yaml │ ├── bc_c25347_pr_updates.yaml │ ├── bc_c25370_pr_updates.yaml │ ├── bc_c49672_pr_updates.yaml │ ├── bc_c49676_pr_updates.yaml │ ├── bc_c49677_pr_updates.yaml │ ├── bc_c49678_pr_updates.yaml │ ├── bc_c49680_pr_updates.yaml │ ├── bc_c53630_pr_updates.yaml │ ├── bc_c54706_pr_updates.yaml │ ├── bc_c60832_pr_updates.yaml │ ├── bc_c69260_pr_updates.yaml │ ├── bc_c81328_pr_updates.yaml │ └── bc_c99531_pr_updates.yaml └── sdtm │ ├── sdtm_ae.yaml │ ├── sdtm_aepresp.yaml │ ├── sdtm_alcoholhx.yaml │ ├── sdtm_beerhx.yaml │ ├── sdtm_bmi.yaml │ ├── sdtm_caffeinehx.yaml │ ├── sdtm_cigarettehx.yaml │ ├── sdtm_cigarhx.yaml │ ├── sdtm_cmfree.yaml │ ├── sdtm_cmpresp.yaml │ ├── sdtm_coffeehx.yaml │ ├── sdtm_colahx.yaml │ ├── sdtm_ctscanchest.yaml │ ├── sdtm_diabp.yaml │ ├── sdtm_distilledspiritshx.yaml │ ├── sdtm_excl01.yaml │ ├── sdtm_frmsize.yaml │ ├── sdtm_height.yaml │ ├── sdtm_hr.yaml │ ├── sdtm_incl01.yaml │ ├── sdtm_medhistfree.yaml │ ├── sdtm_medhistpresp.yaml │ ├── sdtm_mhalzheimers.yaml │ ├── sdtm_mhconfusionalepisodes.yaml │ ├── sdtm_mhessentialtremor.yaml │ ├── sdtm_mhessentialtremorexpyr.yaml │ ├── sdtm_mhextrapyramidal.yaml │ ├── sdtm_mhfacialmasking.yaml │ ├── sdtm_mhrigidityupperextremity.yaml │ ├── sdtm_mhsensitivityneuroleptics.yaml │ ├── sdtm_mhvisualhallucinations.yaml │ ├── sdtm_mribrain.yaml │ ├── sdtm_oxysat.yaml │ ├── sdtm_pipehx.yaml │ ├── sdtm_pulse.yaml │ ├── sdtm_resp.yaml │ ├── sdtm_sar2abdet.yaml │ ├── sdtm_sar2rnaqntcyc.yaml │ ├── sdtm_sar2rnaviral.yaml │ ├── sdtm_sarscov2det.yaml │ ├── sdtm_sysbp.yaml │ ├── sdtm_teahix.yaml │ ├── sdtm_temp.yaml │ ├── sdtm_tobaccohx.yaml │ ├── sdtm_tpa.yaml │ ├── sdtm_tpadna.yaml │ ├── sdtm_tplab.yaml │ ├── sdtm_weight.yaml │ ├── sdtm_winehx.yaml │ ├── sdtm_wstcir.yaml │ └── sdtm_xraychest.yaml ├── 20241217_r10 ├── bc │ ├── bc_c106497_rp.yaml │ ├── bc_c106501_rp.yaml │ ├── bc_c106508_rp.yaml │ ├── bc_c106541_rp.yaml │ ├── bc_c106550_rp.yaml │ ├── bc_c106551_rp.yaml │ ├── bc_c106561_rp.yaml │ ├── bc_c111131_eg.yaml │ ├── bc_c111132_eg.yaml │ ├── bc_c111155_eg.yaml │ ├── bc_c111238_eg.yaml │ ├── bc_c111280_eg.yaml │ ├── bc_c111285_eg.yaml │ ├── bc_c111307_eg.yaml │ ├── bc_c111312_eg.yaml │ ├── bc_c111320_eg.yaml │ ├── bc_c111321_eg.yaml │ ├── bc_c111330_eg.yaml │ ├── bc_c111331_eg.yaml │ ├── bc_c111363_eg.yaml │ ├── bc_c112221_sr.yaml │ ├── bc_c112222_sr.yaml │ ├── bc_c112274_mi.yaml │ ├── bc_c112281_sr.yaml │ ├── bc_c112282_sr.yaml │ ├── bc_c112283_sr.yaml │ ├── bc_c112312_mi.yaml │ ├── bc_c112427_sr.yaml │ ├── bc_c112428_sr.yaml │ ├── bc_c112429_sr.yaml │ ├── bc_c117720_rp.yaml │ ├── bc_c117772_eg.yaml │ ├── bc_c117773_eg.yaml │ ├── bc_c117774_eg.yaml │ ├── bc_c117776_eg.yaml │ ├── bc_c117779_eg.yaml │ ├── bc_c117780_eg.yaml │ ├── bc_c117783_eg.yaml │ ├── bc_c117784_eg.yaml │ ├── bc_c117785_eg.yaml │ ├── bc_c117786_eg.yaml │ ├── bc_c117787_eg.yaml │ ├── bc_c117788_eg.yaml │ ├── bc_c117791_eg.yaml │ ├── bc_c117792_eg.yaml │ ├── bc_c117807_eg.yaml │ ├── bc_c117846_mi.yaml │ ├── bc_c118165_eg.yaml │ ├── bc_c119241_rp.yaml │ ├── bc_c119259_eg.yaml │ ├── bc_c119549_rp.yaml │ ├── bc_c120716_sr.yaml │ ├── bc_c120832_rp.yaml │ ├── bc_c120833_rp.yaml │ ├── bc_c120834_rp.yaml │ ├── bc_c120835_rp.yaml │ ├── bc_c120836_rp.yaml │ ├── bc_c120837_rp.yaml │ ├── bc_c122187_rp.yaml │ ├── bc_c122188_rp.yaml │ ├── bc_c122189_rp.yaml │ ├── bc_c122190_rp.yaml │ ├── bc_c122191_rp.yaml │ ├── bc_c122192_rp.yaml │ ├── bc_c122193_rp.yaml │ ├── bc_c122194_rp.yaml │ ├── bc_c122195_sr.yaml │ ├── bc_c122196_sr.yaml │ ├── bc_c125009_sr.yaml │ ├── bc_c127775_rp.yaml │ ├── bc_c127787_rp.yaml │ ├── bc_c130186_sr.yaml │ ├── bc_c139264_rp.yaml │ ├── bc_c139265_rp.yaml │ ├── bc_c139266_rp.yaml │ ├── bc_c139267_rp.yaml │ ├── bc_c15260_sr.yaml │ ├── bc_c15313_pr.yaml │ ├── bc_c154876_rp.yaml │ ├── bc_c154877_rp.yaml │ ├── bc_c154878_rp.yaml │ ├── bc_c154879_rp.yaml │ ├── bc_c154880_rp.yaml │ ├── bc_c154881_rp.yaml │ ├── bc_c154882_rp.yaml │ ├── bc_c154883_rp.yaml │ ├── bc_c154884_rp.yaml │ ├── bc_c154885_rp.yaml │ ├── bc_c154886_rp.yaml │ ├── bc_c154887_rp.yaml │ ├── bc_c154888_rp.yaml │ ├── bc_c154889_rp.yaml │ ├── bc_c156585_rp.yaml │ ├── bc_c156586_rp.yaml │ ├── bc_c156587_rp.yaml │ ├── bc_c156588_rp.yaml │ ├── bc_c156589_rp.yaml │ ├── bc_c158275_rp.yaml │ ├── bc_c158276_rp.yaml │ ├── bc_c163557_rp.yaml │ ├── bc_c163558_rp.yaml │ ├── bc_c174285_eg.yaml │ ├── bc_c174286_eg.yaml │ ├── bc_c176359_rp.yaml │ ├── bc_c176360_rp.yaml │ ├── bc_c176361_rp.yaml │ ├── bc_c178050_rp.yaml │ ├── bc_c178141_rp.yaml │ ├── bc_c179819_sr.yaml │ ├── bc_c181524_rp.yaml │ ├── bc_c181525_rp.yaml │ ├── bc_c181526_rp.yaml │ ├── bc_c181527_rp.yaml │ ├── bc_c181528_rp.yaml │ ├── bc_c181655_eg.yaml │ ├── bc_c184708_rp.yaml │ ├── bc_c186213_rp.yaml │ ├── bc_c189352_rp.yaml │ ├── bc_c189353_rp.yaml │ ├── bc_c189354_rp.yaml │ ├── bc_c189355_rp.yaml │ ├── bc_c189356_rp.yaml │ ├── bc_c189357_rp.yaml │ ├── bc_c189358_rp.yaml │ ├── bc_c189359_rp.yaml │ ├── bc_c189360_rp.yaml │ ├── bc_c189361_rp.yaml │ ├── bc_c189362_rp.yaml │ ├── bc_c189363_rp.yaml │ ├── bc_c189364_rp.yaml │ ├── bc_c191351_rp.yaml │ ├── bc_c19332_rp.yaml │ ├── bc_c19666_rp.yaml │ ├── bc_c198357_rp.yaml │ ├── bc_c198358_rp.yaml │ ├── bc_c201474_rp.yaml │ ├── bc_c201475_rp.yaml │ ├── bc_c201476_rp.yaml │ ├── bc_c201477_rp.yaml │ ├── bc_c201478_rp.yaml │ ├── bc_c201479_rp.yaml │ ├── bc_c201480_rp.yaml │ ├── bc_c201481_rp.yaml │ ├── bc_c204694_rp.yaml │ ├── bc_c204695_rp.yaml │ ├── bc_c25330_rp.yaml │ ├── bc_c25337_rp.yaml │ ├── bc_c41145_rp.yaml │ ├── bc_c48309_sr.yaml │ ├── bc_c49236_pr.yaml │ ├── bc_c62085_eg.yaml │ ├── bc_c68616_rp.yaml │ ├── bc_c68617_rp.yaml │ ├── bc_c69217_rp.yaml │ ├── bc_c71460_rp.yaml │ ├── bc_c73435_rp.yaml │ ├── bc_c81179_rp.yaml │ ├── bc_c81247_rp.yaml │ ├── bc_c81257_rp.yaml │ ├── bc_c82572_rp.yaml │ ├── bc_c89340_rp.yaml │ ├── bc_c90491_rp.yaml │ ├── bc_c92720_rp.yaml │ └── bc_c93491_rp.yaml └── sdtm │ ├── sdtm_abortn.yaml │ ├── sdtm_adlvrdtc.yaml │ ├── sdtm_adrnrage.yaml │ ├── sdtm_amensind.yaml │ ├── sdtm_asrindex.yaml │ ├── sdtm_asrint.yaml │ ├── sdtm_avcond.yaml │ ├── sdtm_axisvolt.yaml │ ├── sdtm_bcmethod.yaml │ ├── sdtm_bldspnum.yaml │ ├── sdtm_bleedind.yaml │ ├── sdtm_blistind.yaml │ ├── sdtm_blistindfa.yaml │ ├── sdtm_brfendtc.yaml │ ├── sdtm_brfstdtc.yaml │ ├── sdtm_brthftn.yaml │ ├── sdtm_brthlvn.yaml │ ├── sdtm_brthn.yaml │ ├── sdtm_brthprn.yaml │ ├── sdtm_brthstn.yaml │ ├── sdtm_brtlvind.yaml │ ├── sdtm_bsbmpind.yaml │ ├── sdtm_bthglind.yaml │ ├── sdtm_cabnind.yaml │ ├── sdtm_childpot.yaml │ ├── sdtm_chyptenl.yaml │ ├── sdtm_cmpriorbreastcancer.yaml │ ├── sdtm_cndmind.yaml │ ├── sdtm_cndufrqd.yaml │ ├── sdtm_csrsctn.yaml │ ├── sdtm_dlvrmode.yaml │ ├── sdtm_dschgind.yaml │ ├── sdtm_ecchyind.yaml │ ├── sdtm_ectpregn.yaml │ ├── sdtm_edcdtc.yaml │ ├── sdtm_edemaind.yaml │ ├── sdtm_edlvrdtc.yaml │ ├── sdtm_egestage.yaml │ ├── sdtm_eghrmn.yaml │ ├── sdtm_egintp.yaml │ ├── sdtm_enmpsdtc.yaml │ ├── sdtm_erlytrmn.yaml │ ├── sdtm_erythind.yaml │ ├── sdtm_estrcptaprpscore.yaml │ ├── sdtm_estrcptasintscore.yaml │ ├── sdtm_estrcptatotscore.yaml │ ├── sdtm_fetldthn.yaml │ ├── sdtm_flaresz.yaml │ ├── sdtm_flrldiam.yaml │ ├── sdtm_flrmdiam.yaml │ ├── sdtm_fmpstdtc.yaml │ ├── sdtm_fsxiage.yaml │ ├── sdtm_fsxoage.yaml │ ├── sdtm_fulltrmn.yaml │ ├── sdtm_fundht.yaml │ ├── sdtm_gravind.yaml │ ├── sdtm_her2stainingint.yaml │ ├── sdtm_hmpind.yaml │ ├── sdtm_hspgcind.yaml │ ├── sdtm_idrldiam.yaml │ ├── sdtm_inaboind.yaml │ ├── sdtm_inabortn.yaml │ ├── sdtm_infrtind.yaml │ ├── sdtm_irrmpind.yaml │ ├── sdtm_ivtiacd.yaml │ ├── sdtm_lmpeltm.yaml │ ├── sdtm_lmpstdtc.yaml │ ├── sdtm_massind.yaml │ ├── sdtm_menarage.yaml │ ├── sdtm_menarind.yaml │ ├── sdtm_menfdur.yaml │ ├── sdtm_menfrd.yaml │ ├── sdtm_menoage.yaml │ ├── sdtm_menostat.yaml │ ├── sdtm_menreg.yaml │ ├── sdtm_mensdur.yaml │ ├── sdtm_mensdura.yaml │ ├── sdtm_mrsxidtc.yaml │ ├── sdtm_mscrgind.yaml │ ├── sdtm_mtendind.yaml │ ├── sdtm_pacemakr.yaml │ ├── sdtm_pconfind.yaml │ ├── sdtm_peelind.yaml │ ├── sdtm_pprtind.yaml │ ├── sdtm_ppsm.yaml │ ├── sdtm_prag.yaml │ ├── sdtm_prdceind.yaml │ ├── sdtm_pregind.yaml │ ├── sdtm_pregnn.yaml │ ├── sdtm_pregst.yaml │ ├── sdtm_prembthn.yaml │ ├── sdtm_prgendtc.yaml │ ├── sdtm_prgout.yaml │ ├── sdtm_progestraprpscore.yaml │ ├── sdtm_progestrasintscore.yaml │ ├── sdtm_progestratotscore.yaml │ ├── sdtm_prsb.yaml │ ├── sdtm_prvpregn.yaml │ ├── sdtm_psuspind.yaml │ ├── sdtm_pustind.yaml │ ├── sdtm_pwdursb.yaml │ ├── sdtm_qrs_axis.yaml │ ├── sdtm_qrsag.yaml │ ├── sdtm_qrssb.yaml │ ├── sdtm_qtag.yaml │ ├── sdtm_qtcbag.yaml │ ├── sdtm_qtcbsb.yaml │ ├── sdtm_qtcfag.yaml │ ├── sdtm_qtcfsb.yaml │ ├── sdtm_qtcunsag.yaml │ ├── sdtm_qtcunssb.yaml │ ├── sdtm_qtsb.yaml │ ├── sdtm_radtheraphybreastcancer.yaml │ ├── sdtm_rashind.yaml │ ├── sdtm_reactgr.yaml │ ├── sdtm_rhynos.yaml │ ├── sdtm_rrag.yaml │ ├── sdtm_rrsm.yaml │ ├── sdtm_scbfcind.yaml │ ├── sdtm_sexabdur.yaml │ ├── sdtm_skglaind.yaml │ ├── sdtm_snrarry.yaml │ ├── sdtm_spabortn.yaml │ ├── sdtm_sprarry.yaml │ ├── sdtm_sprtarry.yaml │ ├── sdtm_srgstind.yaml │ ├── sdtm_stilbind.yaml │ ├── sdtm_ststwuw.yaml │ ├── sdtm_sxprtfn.yaml │ ├── sdtm_sxprtmn.yaml │ ├── sdtm_sxprtnfn.yaml │ ├── sdtm_sxprtnmn.yaml │ ├── sdtm_sxprtnon.yaml │ ├── sdtm_sxprton.yaml │ ├── sdtm_techqual.yaml │ ├── sdtm_thick.yaml │ ├── sdtm_thlarage.yaml │ ├── sdtm_tndrind.yaml │ ├── sdtm_trmpgcat.yaml │ ├── sdtm_tsxpartn.yaml │ ├── sdtm_ulcerind.yaml │ ├── sdtm_vagdlvn.yaml │ ├── sdtm_vbsfrqd.yaml │ ├── sdtm_vtarry.yaml │ ├── sdtm_vttarry.yaml │ ├── sdtm_whealsz.yaml │ ├── sdtm_whlint.yaml │ ├── sdtm_whlldiam.yaml │ └── sdtm_whlmdiam.yaml ├── 20250401_r11 ├── bc │ ├── bc_bc_c106303.yaml │ ├── bc_bc_c111153.yaml │ ├── bc_bc_c123559.yaml │ ├── bc_bc_c123560.yaml │ ├── bc_bc_c123621.yaml │ ├── bc_bc_c125201.yaml │ ├── bc_bc_c125581.yaml │ ├── bc_bc_c128554.yaml │ ├── bc_bc_c132456.yaml │ ├── bc_bc_c135727.yaml │ ├── bc_bc_c139532.yaml │ ├── bc_bc_c139533.yaml │ ├── bc_bc_c139554.yaml │ ├── bc_bc_c146691.yaml │ ├── bc_bc_c146692.yaml │ ├── bc_bc_c147564.yaml │ ├── bc_bc_c15189.yaml │ ├── bc_bc_c15190.yaml │ ├── bc_bc_c15195.yaml │ ├── bc_bc_c15275.yaml │ ├── bc_bc_c15277.yaml │ ├── bc_bc_c15280.yaml │ ├── bc_bc_c15492.yaml │ ├── bc_bc_c15496.yaml │ ├── bc_bc_c15667.yaml │ ├── bc_bc_c15709.yaml │ ├── bc_bc_c157250.yaml │ ├── bc_bc_c15755.yaml │ ├── bc_bc_c157802.yaml │ ├── bc_bc_c160722.yaml │ ├── bc_bc_c160723.yaml │ ├── bc_bc_c160724.yaml │ ├── bc_bc_c16149.yaml │ ├── bc_bc_c16150.yaml │ ├── bc_bc_c16152.yaml │ ├── bc_bc_c16818.yaml │ ├── bc_bc_c17007.yaml │ ├── bc_bc_c17230.yaml │ ├── bc_bc_c17369.yaml │ ├── bc_bc_c176551.yaml │ ├── bc_bc_c17751.yaml │ ├── bc_bc_c177692.yaml │ ├── bc_bc_c18194.yaml │ ├── bc_bc_c183130.yaml │ ├── bc_bc_c18477.yaml │ ├── bc_bc_c186741.yaml │ ├── bc_bc_c188928.yaml │ ├── bc_bc_c190808.yaml │ ├── bc_bc_c192424.yaml │ ├── bc_bc_c19337.yaml │ ├── bc_bc_c19635.yaml │ ├── bc_bc_c19636.yaml │ ├── bc_bc_c19770.yaml │ ├── bc_bc_c199199.yaml │ ├── bc_bc_c202140.yaml │ ├── bc_bc_c28042.yaml │ ├── bc_bc_c28234.yaml │ ├── bc_bc_c35867.yaml │ ├── bc_bc_c36285.yaml │ ├── bc_bc_c38155.yaml │ ├── bc_bc_c4872.yaml │ ├── bc_bc_c48938.yaml │ ├── bc_bc_c51900.yaml │ ├── bc_bc_c52159.yaml │ ├── bc_bc_c53556.yaml │ ├── bc_bc_c55073.yaml │ ├── bc_bc_c68748.yaml │ ├── bc_bc_c71428.yaml │ ├── bc_bc_c79416.yaml │ ├── bc_bc_c93645.yaml │ ├── bc_bc_c94299.yaml │ ├── bc_bc_c94411.yaml │ ├── bc_dm_c16564.yaml │ ├── bc_dm_c17049.yaml │ ├── bc_dm_c28421.yaml │ ├── bc_dm_c69260.yaml │ ├── bc_gf_c17208.yaml │ ├── bc_gf_c17248.yaml │ ├── bc_gf_c181330.yaml │ ├── bc_gf_c181331.yaml │ ├── bc_gf_c181332.yaml │ ├── bc_gf_c181333.yaml │ ├── bc_gf_c181334.yaml │ ├── bc_gf_c181335.yaml │ ├── bc_gf_c18302.yaml │ ├── bc_gf_c189439.yaml │ ├── bc_gf_c189440.yaml │ ├── bc_gf_c189441.yaml │ ├── bc_gf_c28614.yaml │ ├── bc_gf_c63331.yaml │ ├── bc_gf_c63479.yaml │ ├── bc_lb_c105585.yaml │ ├── bc_lb_c105586.yaml │ ├── bc_lb_c105587.yaml │ ├── bc_lb_c105588.yaml │ ├── bc_lb_c105589.yaml │ ├── bc_lb_c111207.yaml │ ├── bc_lb_c119293.yaml │ ├── bc_lb_c122157.yaml │ ├── bc_lb_c125949.yaml │ ├── bc_lb_c127127.yaml │ ├── bc_lb_c132388.yaml │ ├── bc_lb_c139084.yaml │ ├── bc_lb_c147128.yaml │ ├── bc_lb_c147355.yaml │ ├── bc_lb_c147390.yaml │ ├── bc_lb_c147403.yaml │ ├── bc_lb_c147406.yaml │ ├── bc_lb_c147905.yaml │ ├── bc_lb_c154812.yaml │ ├── bc_lb_c158424.yaml │ ├── bc_lb_c16723.yaml │ ├── bc_lb_c170598.yaml │ ├── bc_lb_c171439.yaml │ ├── bc_lb_c171456.yaml │ ├── bc_lb_c171531.yaml │ ├── bc_lb_c171532.yaml │ ├── bc_lb_c17241.yaml │ ├── bc_lb_c174314.yaml │ ├── bc_lb_c184647.yaml │ ├── bc_lb_c198341.yaml │ ├── bc_lb_c199683.yaml │ ├── bc_lb_c200008.yaml │ ├── bc_lb_c200249.yaml │ ├── bc_lb_c201227.yaml │ ├── bc_lb_c210010.yaml │ ├── bc_lb_c28133.yaml │ ├── bc_lb_c35553.yaml │ ├── bc_lb_c36292.yaml │ ├── bc_lb_c38037.yaml │ ├── bc_lb_c44414.yaml │ ├── bc_lb_c45398.yaml │ ├── bc_lb_c45997.yaml │ ├── bc_lb_c49188.yaml │ ├── bc_lb_c49237.yaml │ ├── bc_lb_c49286.yaml │ ├── bc_lb_c51946.yaml │ ├── bc_lb_c51948.yaml │ ├── bc_lb_c51949.yaml │ ├── bc_lb_c51950.yaml │ ├── bc_lb_c51951.yaml │ ├── bc_lb_c60819.yaml │ ├── bc_lb_c63321.yaml │ ├── bc_lb_c64430.yaml │ ├── bc_lb_c64431.yaml │ ├── bc_lb_c64432.yaml │ ├── bc_lb_c64433.yaml │ ├── bc_lb_c64467.yaml │ ├── bc_lb_c64470.yaml │ ├── bc_lb_c64488.yaml │ ├── bc_lb_c64495.yaml │ ├── bc_lb_c64545.yaml │ ├── bc_lb_c64546.yaml │ ├── bc_lb_c64547.yaml │ ├── bc_lb_c64548.yaml │ ├── bc_lb_c64550.yaml │ ├── bc_lb_c64796.yaml │ ├── bc_lb_c64797.yaml │ ├── bc_lb_c64798.yaml │ ├── bc_lb_c64799.yaml │ ├── bc_lb_c64803.yaml │ ├── bc_lb_c64809.yaml │ ├── bc_lb_c64810.yaml │ ├── bc_lb_c64812.yaml │ ├── bc_lb_c64813.yaml │ ├── bc_lb_c64814.yaml │ ├── bc_lb_c64816.yaml │ ├── bc_lb_c64817.yaml │ ├── bc_lb_c64821.yaml │ ├── bc_lb_c64822.yaml │ ├── bc_lb_c64823.yaml │ ├── bc_lb_c64827.yaml │ ├── bc_lb_c64830.yaml │ ├── bc_lb_c64831.yaml │ ├── bc_lb_c64832.yaml │ ├── bc_lb_c64847.yaml │ ├── bc_lb_c64848.yaml │ ├── bc_lb_c64849.yaml │ ├── bc_lb_c64851.yaml │ ├── bc_lb_c64853.yaml │ ├── bc_lb_c64854.yaml │ ├── bc_lb_c64855.yaml │ ├── bc_lb_c64857.yaml │ ├── bc_lb_c64858.yaml │ ├── bc_lb_c67208.yaml │ ├── bc_lb_c73495.yaml │ ├── bc_lb_c74667.yaml │ ├── bc_lb_c74675.yaml │ ├── bc_lb_c74676.yaml │ ├── bc_lb_c74686.yaml │ ├── bc_lb_c74737.yaml │ ├── bc_lb_c74742.yaml │ ├── bc_lb_c74747.yaml │ ├── bc_lb_c74748.yaml │ ├── bc_lb_c74786.yaml │ ├── bc_lb_c74797.yaml │ ├── bc_lb_c74803.yaml │ ├── bc_lb_c74804.yaml │ ├── bc_lb_c74834.yaml │ ├── bc_lb_c74946.yaml │ ├── bc_lb_c74949.yaml │ ├── bc_lb_c74954.yaml │ ├── bc_lb_c74957.yaml │ ├── bc_lb_c75342.yaml │ ├── bc_lb_c75385.yaml │ ├── bc_lb_c79602.yaml │ ├── bc_lb_c81997.yaml │ ├── bc_lb_c82045.yaml │ ├── bc_lb_c82621.yaml │ ├── bc_lb_c82624.yaml │ ├── bc_lb_c92249.yaml │ ├── bc_lb_c96591.yaml │ ├── bc_lb_c98762.yaml │ ├── bc_lb_new_1.yaml │ ├── bc_mk_c110937.yaml │ ├── bc_mk_c112025.yaml │ ├── bc_mk_c120401.yaml │ ├── bc_mk_c139217.yaml │ ├── bc_mk_c139218.yaml │ ├── bc_mk_c139220.yaml │ ├── bc_mk_c139221.yaml │ ├── bc_mk_c139222.yaml │ ├── bc_mk_c139223.yaml │ ├── bc_mk_c139224.yaml │ ├── bc_mk_c139225.yaml │ ├── bc_mk_c139226.yaml │ ├── bc_mk_c139227.yaml │ ├── bc_mk_c147472.yaml │ ├── bc_mk_c147473.yaml │ ├── bc_mk_c178018.yaml │ ├── bc_mk_c181501.yaml │ ├── bc_mk_c191306.yaml │ ├── bc_mk_c191307.yaml │ ├── bc_mk_c19332.yaml │ ├── bc_mk_c25338.yaml │ ├── bc_mk_c61545.yaml │ ├── bc_mk_c68741.yaml │ ├── bc_mk_c87802.yaml │ ├── bc_ur_c130195.yaml │ ├── bc_ur_c130196.yaml │ ├── bc_ur_c135509.yaml │ ├── bc_ur_c135522.yaml │ ├── bc_ur_c179823.yaml │ ├── bc_ur_c179824.yaml │ ├── bc_ur_c189437.yaml │ ├── bc_ur_c198401.yaml │ ├── bc_ur_c25305.yaml │ ├── bc_ur_c25334.yaml │ ├── bc_ur_c25337.yaml │ ├── bc_ur_c82554.yaml │ ├── bc_ur_c94866.yaml │ └── bc_ur_c96648.yaml └── sdtm │ ├── sdtm_ae.yaml │ ├── sdtm_aepresp.yaml │ ├── sdtm_age.yaml │ ├── sdtm_albserpl.yaml │ ├── sdtm_alburin.yaml │ ├── sdtm_alburinpres.yaml │ ├── sdtm_alphangl.yaml │ ├── sdtm_alpserpl.yaml │ ├── sdtm_altserpl.yaml │ ├── sdtm_anisobld.yaml │ ├── sdtm_asmmass.yaml │ ├── sdtm_astserpl.yaml │ ├── sdtm_basobld.yaml │ ├── sdtm_betaangl.yaml │ ├── sdtm_bicarbbld.yaml │ ├── sdtm_biliserpl.yaml │ ├── sdtm_biliurin.yaml │ ├── sdtm_biliurinpres.yaml │ ├── sdtm_blycebld.yaml │ ├── sdtm_bmc.yaml │ ├── sdtm_bmd.yaml │ ├── sdtm_bmdt.yaml │ ├── sdtm_bmdz.yaml │ ├── sdtm_bmmtabdt.yaml │ ├── sdtm_bmmtdors.yaml │ ├── sdtm_bmmteve.yaml │ ├── sdtm_bmmtext.yaml │ ├── sdtm_bmmtflx.yaml │ ├── sdtm_bmmtinv.yaml │ ├── sdtm_bmmtlr.yaml │ ├── sdtm_bmmtpf.yaml │ ├── sdtm_bodyfatp.yaml │ ├── sdtm_cabld.yaml │ ├── sdtm_carbxhgb.yaml │ ├── sdtm_caserpl.yaml │ ├── sdtm_cholserpl.yaml │ ├── sdtm_clbld.yaml │ ├── sdtm_clserpl.yaml │ ├── sdtm_cmonoxbld.yaml │ ├── sdtm_cmonoxexpair.yaml │ ├── sdtm_co2bld.yaml │ ├── sdtm_co2serpl.yaml │ ├── sdtm_colorurin.yaml │ ├── sdtm_colorursys.yaml │ ├── sdtm_cotinineurin.yaml │ ├── sdtm_cpnumvaraltexon.yaml │ ├── sdtm_cpnumvaratio.yaml │ ├── sdtm_cpnumvarintp.yaml │ ├── sdtm_cpnumvarnumgcpy.yaml │ ├── sdtm_creatserpl.yaml │ ├── sdtm_creaturin.yaml │ ├── sdtm_crpserpl.yaml │ ├── sdtm_ddimerppp.yaml │ ├── sdtm_diabp.yaml │ ├── sdtm_endurm.yaml │ ├── sdtm_eosbld.yaml │ ├── sdtm_ethnic.yaml │ ├── sdtm_ferritinserpl.yaml │ ├── sdtm_frmsize.yaml │ ├── sdtm_genesigintp.yaml │ ├── sdtm_genesigscore.yaml │ ├── sdtm_ggtserpl.yaml │ ├── sdtm_glucbld.yaml │ ├── sdtm_glucpl.yaml │ ├── sdtm_glucser.yaml │ ├── sdtm_glucua.yaml │ ├── sdtm_glucurin.yaml │ ├── sdtm_glucurinpres.yaml │ ├── sdtm_hba1cbld.yaml │ ├── sdtm_hba1chgbbld.yaml │ ├── sdtm_hbcohgb.yaml │ ├── sdtm_hcgcnctserpl.yaml │ ├── sdtm_hcgserpl.yaml │ ├── sdtm_hcgurin.yaml │ ├── sdtm_hctbld.yaml │ ├── sdtm_hdlserpl.yaml │ ├── sdtm_hgbbld.yaml │ ├── sdtm_hgbblddip.yaml │ ├── sdtm_hr.yaml │ ├── sdtm_intlk6serpl.yaml │ ├── sdtm_kbld.yaml │ ├── sdtm_ketonesurin.yaml │ ├── sdtm_ketonesurinpres.yaml │ ├── sdtm_kgftst.yaml │ ├── sdtm_kserpl.yaml │ ├── sdtm_kurin.yaml │ ├── sdtm_ldhserpl.yaml │ ├── sdtm_ldlserpl.yaml │ ├── sdtm_lymphbld.yaml │ ├── sdtm_macroblurinpres.yaml │ ├── sdtm_macrocybld.yaml │ ├── sdtm_macrocyurnsed.yaml │ ├── sdtm_mch.yaml │ ├── sdtm_mchc.yaml │ ├── sdtm_mcv.yaml │ ├── sdtm_micristbdetect.yaml │ ├── sdtm_micristbovrastat.yaml │ ├── sdtm_microcybld.yaml │ ├── sdtm_microcyrbc.yaml │ ├── sdtm_microcyurn.yaml │ ├── sdtm_microcyurnsed.yaml │ ├── sdtm_monobld.yaml │ ├── sdtm_neutbbld.yaml │ ├── sdtm_neutbld.yaml │ ├── sdtm_neutblebld.yaml │ ├── sdtm_neutlebld.yaml │ ├── sdtm_neutsgbld.yaml │ ├── sdtm_neutsglebld.yaml │ ├── sdtm_nicotineserpl.yaml │ ├── sdtm_nicotineurin.yaml │ ├── sdtm_nitriteurin.yaml │ ├── sdtm_nitriteurinpres.yaml │ ├── sdtm_nornctnurin.yaml │ ├── sdtm_occbldstool.yaml │ ├── sdtm_oxysat.yaml │ ├── sdtm_phosserpl.yaml │ ├── sdtm_phurin.yaml │ ├── sdtm_platbld.yaml │ ├── sdtm_po2fio2arterial.yaml │ ├── sdtm_poikilobld.yaml │ ├── sdtm_polychrbld.yaml │ ├── sdtm_protserpl.yaml │ ├── sdtm_proturin.yaml │ ├── sdtm_proturinpres.yaml │ ├── sdtm_pulse.yaml │ ├── sdtm_race.yaml │ ├── sdtm_rbcbld.yaml │ ├── sdtm_rnlanum.yaml │ ├── sdtm_rnlvnum.yaml │ ├── sdtm_sar2abdet.yaml │ ├── sdtm_sar2rnaqntcyc.yaml │ ├── sdtm_sar2rnaviral.yaml │ ├── sdtm_sarscov2det.yaml │ ├── sdtm_seqreareaddepth.yaml │ ├── sdtm_seqreargene1.yaml │ ├── sdtm_seqreargene2.yaml │ ├── sdtm_seqrearimpclass.yaml │ ├── sdtm_seqrearpreinfrind.yaml │ ├── sdtm_seqreartype.yaml │ ├── sdtm_sex.yaml │ ├── sdtm_shrtvareadepth.yaml │ ├── sdtm_shrtvareadepthrd.yaml │ ├── sdtm_shrtvarimpclass.yaml │ ├── sdtm_shrtvarpramachg.yaml │ ├── sdtm_shrtvarprcseqchg.yaml │ ├── sdtm_snvgenotype.yaml │ ├── sdtm_snvpramachg.yaml │ ├── sdtm_snvprcseqchg.yaml │ ├── sdtm_snvreadepth.yaml │ ├── sdtm_snvvareadepthrd.yaml │ ├── sdtm_snvvarimpclass.yaml │ ├── sdtm_sodiumbld.yaml │ ├── sdtm_sodiumserpl.yaml │ ├── sdtm_sodiumurin.yaml │ ├── sdtm_spgravurin.yaml │ ├── sdtm_sysbp.yaml │ ├── sdtm_t3serpl.yaml │ ├── sdtm_t3upserpl.yaml │ ├── sdtm_t4fridxserpl.yaml │ ├── sdtm_t4frserpl.yaml │ ├── sdtm_tlycebld.yaml │ ├── sdtm_tmbnormnumseqvar.yaml │ ├── sdtm_tmbnumseqvar.yaml │ ├── sdtm_tmbvarseqburdintp.yaml │ ├── sdtm_tpa.yaml │ ├── sdtm_tpadna.yaml │ ├── sdtm_tplab.yaml │ ├── sdtm_trigserpl.yaml │ ├── sdtm_trnscptnfragcnt.yaml │ ├── sdtm_trnscptngentrnind.yaml │ ├── sdtm_trnscptnnormlvl.yaml │ ├── sdtm_trnscptnnormlvldiff.yaml │ ├── sdtm_trnscptnpercntrank.yaml │ ├── sdtm_tshbld.yaml │ ├── sdtm_tshserpl.yaml │ ├── sdtm_urateserpl.yaml │ ├── sdtm_urblr.yaml │ ├── sdtm_ureanserpl.yaml │ ├── sdtm_urexam.yaml │ ├── sdtm_urhemind.yaml │ ├── sdtm_urobilurin.yaml │ ├── sdtm_urobilurinpres.yaml │ ├── sdtm_urorgln.yaml │ ├── sdtm_urpdff.yaml │ ├── sdtm_ursgdmg.yaml │ ├── sdtm_varprofprdiplo.yaml │ ├── sdtm_varprofprpheno.yaml │ ├── sdtm_vitb12bld.yaml │ ├── sdtm_vitb12serpl.yaml │ ├── sdtm_vitb9bld.yaml │ ├── sdtm_vitb9serpl.yaml │ ├── sdtm_vldlserpl.yaml │ ├── sdtm_vntrncagrpt.yaml │ ├── sdtm_vntrnuclseq.yaml │ ├── sdtm_vntrpncagrpt.yaml │ └── sdtm_wbcbld.yaml ├── validate_bc.cmd ├── validate_collection.cmd └── validate_sdtm.cmd /.gitignore: -------------------------------------------------------------------------------- 1 | .vscode/ 2 | .hypothesis/ 3 | __pycache__/ 4 | *.code-workspace 5 | *.xpr 6 | test/ 7 | tools/ 8 | text/ 9 | venv/ 10 | .env 11 | work/ 12 | yaml/latest 13 | yaml/*/*_test 14 | ~$*.* 15 | *.log 16 | *.lst 17 | *.sas7b* 18 | get_*.html 19 | get_*.xlsx 20 | create_*.html 21 | 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Instead, use the spreadsheets in the [export](https://github.com/cdisc-org/COSMoS/tree/main/export) folder. 7 | 8 | - **curation/draft** 9 | 10 | The [curation/draft](https://github.com/cdisc-org/COSMoS/tree/main/curation/draft) folder contains draft curation spreadsheets that are still work in progress. 11 | The content in these draft spreadsheets is neither validated nor loaded in the CDISC Library. 12 | -------------------------------------------------------------------------------- /curation/draft/collection_specialization_vs_final_draft.xlsx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cdisc-org/COSMoS/1135ac0ac0e3bb408302c678449ce41a224f3d91/curation/draft/collection_specialization_vs_final_draft.xlsx -------------------------------------------------------------------------------- /export/archive/cdisc_biomedical_concepts_20231003.xlsx: 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-------------------------------------------------------------------------------- 1 | ```mermaid 2 | erDiagram 3 | BiomedicalConcept { 4 | date packageDate 5 | PackageTypeEnum packageType 6 | string conceptId 7 | string ncitCode 8 | uri href 9 | string parentConceptId 10 | stringList categories 11 | string shortName 12 | stringList synonyms 13 | BiomedicalConceptResultScaleEnumList resultScales 14 | string definition 15 | } 16 | Coding { 17 | string code 18 | string system 19 | string systemName 20 | } 21 | DataElementConcept { 22 | string conceptId 23 | string ncitCode 24 | uri href 25 | string shortName 26 | DataElementConceptDataTypeEnum dataType 27 | stringList exampleSet 28 | } 29 | 30 | BiomedicalConcept ||--}o Coding : "coding" 31 | BiomedicalConcept ||--}o DataElementConcept : "dataElementConcepts" 32 | 33 | ``` 34 | 35 | -------------------------------------------------------------------------------- /model/cosmos_bc_model.yuml: -------------------------------------------------------------------------------- 1 | https://yuml.me/diagram/nofunky;dir:TB/class/[BiomedicalConcept|packageDate:date;packageType:PackageTypeEnum;conceptId:string;ncitCode:string %3F;href:uri %3F;parentConceptId:string %3F;categories:string %2B;shortName:string;synonyms:string *;resultScales:BiomedicalConceptResultScaleEnum *;definition:string]++- dataElementConcepts 0..*>[DataElementConcept|conceptId:string;ncitCode:string %3F;href:uri %3F;shortName:string;dataType:DataElementConceptDataTypeEnum;exampleSet:string *],[BiomedicalConcept]++- coding 0..*>[Coding|code:string;system:string;systemName:string %3F],[BiomedicalConcept] -------------------------------------------------------------------------------- /project/bc/excel/cosmos_bc_model.xlsx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cdisc-org/COSMoS/1135ac0ac0e3bb408302c678449ce41a224f3d91/project/bc/excel/cosmos_bc_model.xlsx -------------------------------------------------------------------------------- /project/bc/prefixmap/cosmos_bc_model.yaml: -------------------------------------------------------------------------------- 1 | { 2 | "NCIT": "http://purl.obolibrary.org/obo/NCIT_", 3 | "cosmos_bc": "https://www.cdisc.org/cosmos/biomedical_concept_v1.0", 4 | "linkml": "https://w3id.org/linkml/" 5 | } -------------------------------------------------------------------------------- /project/bc/protobuf/cosmos_bc_model.proto: -------------------------------------------------------------------------------- 1 | syntax="proto3"; 2 | package 3 | // metamodel_version: 1.7.0 4 | message BiomedicalConcept 5 | { 6 | date packageDate = 0 7 | packageTypeEnum packageType = 0 8 | string conceptId = 0 9 | string ncitCode = 0 10 | uri href = 0 11 | string parentConceptId = 0 12 | repeated string categories = 0 13 | string shortName = 0 14 | repeated string synonyms = 0 15 | repeated biomedicalConceptResultScaleEnum resultScales = 0 16 | string definition = 0 17 | repeated coding coding = 0 18 | repeated dataElementConcept dataElementConcepts = 0 19 | } 20 | message Coding 21 | { 22 | string code = 0 23 | string system = 0 24 | string systemName = 0 25 | } 26 | message DataElementConcept 27 | { 28 | string conceptId = 0 29 | string ncitCode = 0 30 | uri href = 0 31 | string shortName = 0 32 | dataElementConceptDataTypeEnum dataType = 0 33 | repeated string exampleSet = 0 34 | } 35 | -------------------------------------------------------------------------------- /project/collection/excel/cosmos_collection_bc_model.xlsx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cdisc-org/COSMoS/1135ac0ac0e3bb408302c678449ce41a224f3d91/project/collection/excel/cosmos_collection_bc_model.xlsx -------------------------------------------------------------------------------- /project/collection/prefixmap/cosmos_collection_bc_model.yaml: -------------------------------------------------------------------------------- 1 | { 2 | "NCIT": "http://purl.obolibrary.org/obo/NCIT_", 3 | "cosmos_collection": "https://www.cdisc.org/cosmos/collection_v1.0", 4 | "linkml": "https://w3id.org/linkml/" 5 | } -------------------------------------------------------------------------------- /project/sdtm/excel/cosmos_sdtm_bc_model.xlsx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cdisc-org/COSMoS/1135ac0ac0e3bb408302c678449ce41a224f3d91/project/sdtm/excel/cosmos_sdtm_bc_model.xlsx -------------------------------------------------------------------------------- /project/sdtm/prefixmap/cosmos_sdtm_bc_model.yaml: -------------------------------------------------------------------------------- 1 | { 2 | "NCIT": "http://purl.obolibrary.org/obo/NCIT_", 3 | "cosmos_sdtm": "https://www.cdisc.org/cosmos/sdtm_v1.0/", 4 | "linkml": "https://w3id.org/linkml/" 5 | } -------------------------------------------------------------------------------- /requirements.txt: -------------------------------------------------------------------------------- 1 | linkml==1.8.6 2 | -------------------------------------------------------------------------------- /utilities/data/.gitignore: -------------------------------------------------------------------------------- 1 | * 2 | !.gitignore 3 | 4 | -------------------------------------------------------------------------------- /utilities/downloads/.gitignore: -------------------------------------------------------------------------------- 1 | * 2 | !.gitignore 3 | -------------------------------------------------------------------------------- /utilities/images/2023_Standards-Badges_v5.2-BCs.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cdisc-org/COSMoS/1135ac0ac0e3bb408302c678449ce41a224f3d91/utilities/images/2023_Standards-Badges_v5.2-BCs.png -------------------------------------------------------------------------------- /utilities/images/bc-sdtm-erd-light-small.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cdisc-org/COSMoS/1135ac0ac0e3bb408302c678449ce41a224f3d91/utilities/images/bc-sdtm-erd-light-small.png -------------------------------------------------------------------------------- /utilities/images/bc-sdtm-erd-light.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/cdisc-org/COSMoS/1135ac0ac0e3bb408302c678449ce41a224f3d91/utilities/images/bc-sdtm-erd-light.png -------------------------------------------------------------------------------- /utilities/images/bc-sdtm-erd.md: -------------------------------------------------------------------------------- 1 | ```mermaid 2 | erDiagram 3 | BiomedicalConcept { 4 | string bc_id PK 5 | string ncit_code 6 | } 7 | 8 | DataElementConcept { 9 | string dec_id PK 10 | string ncitCode 11 | } 12 | 13 | SDTMGroup { 14 | string vlm_group_id PK 15 | string bc_id FK 16 | } 17 | 18 | SDTMVariable { 19 | string sdtm_variable PK 20 | string dec_id FK 21 | } 22 | 23 | 24 | BiomedicalConcept ||--}o DataElementConcept : "Data Element Concepts" 25 | SDTMGroup ||--}| SDTMVariable : "SDTM Variables" 26 | BiomedicalConcept ||--}o SDTMGroup : "SDTM Specializations" 27 | DataElementConcept |o--|| SDTMVariable : "" 28 | 29 | ``` 30 | -------------------------------------------------------------------------------- /utilities/macros/get_api_response.sas: -------------------------------------------------------------------------------- 1 | %macro get_api_response( 2 | baseurl=, 3 | endpoint=, 4 | response_file=, 5 | response_fileref=, 6 | apikey=&api_key, 7 | accept=application/json 8 | ); 9 | 10 | %if %sysevalf(%superq(response_file)=, boolean)=0 %then 11 | filename response "&response_file";; 12 | 13 | proc http 14 | url="&baseurl.&endpoint" 15 | %if %sysevalf(%superq(response_file)=, boolean)=0 %then 16 | out=response; 17 | %else 18 | out=&response_fileref; 19 | ; 20 | headers 21 | "api-key"="&apikey" 22 | "Accept"="&accept" 23 | ; 24 | debug &rest_debug; 25 | run; 26 | %prochttp_check_return(200); 27 | 28 | %if %sysevalf(%superq(response_file)=, boolean)=0 %then 29 | filename response clear;; 30 | 31 | %mend get_api_response; 32 | -------------------------------------------------------------------------------- /utilities/macros/get_subset_codelists.sas: -------------------------------------------------------------------------------- 1 | %macro get_Subset_Codelists(file=, range=, dsout=); 2 | 3 | %ReadExcel(file=&file, range=&range, dsout=&dsout); 4 | 5 | proc sort data=&dsout; 6 | by Subset_Short_Name Submission_Value; 7 | run; 8 | 9 | data &dsout(keep=Parent_Codelist Subset_Short_Name subset_value_list); 10 | retain Parent_Codelist Subset_Short_Name subset_value_list; 11 | length subset_value_list $8192; 12 | set &dsout; 13 | by Subset_Short_Name Submission_Value; 14 | if first.Subset_Short_Name then subset_value_list=""; 15 | subset_value_list=catx(";", subset_value_list, Submission_Value); 16 | if last.Subset_Short_Name then output; 17 | run; 18 | 19 | %mend get_Subset_Codelists; 20 | -------------------------------------------------------------------------------- /utilities/macros/prochttp_check_return.sas: -------------------------------------------------------------------------------- 1 | %macro prochttp_check_return(code); 2 | %if %symexist(SYS_PROCHTTP_STATUS_CODE) ne 1 %then %do; 3 | %put ERROR: Expected &code., but a response was not received from the HTTP Procedure; 4 | %abort; 5 | %end; 6 | %else %do; 7 | %if &SYS_PROCHTTP_STATUS_CODE. ne &code. %then %do; 8 | %put ERROR: Expected &code., but received &SYS_PROCHTTP_STATUS_CODE. &SYS_PROCHTTP_STATUS_PHRASE.; 9 | %abort; 10 | %end; 11 | %else %do; 12 | %put NOTE: Expected code received &SYS_PROCHTTP_STATUS_CODE. &SYS_PROCHTTP_STATUS_PHRASE.; 13 | %end; 14 | %end; 15 | %mend prochttp_check_return; 16 | -------------------------------------------------------------------------------- /utilities/reports/.gitignore: -------------------------------------------------------------------------------- 1 | * 2 | !.gitignore 3 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_lb_c147905.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C147905 4 | ncitCode: C147905 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C147905 6 | parentConceptId: C17241 7 | categories: 8 | - Laboratory Tests 9 | shortName: Urine Dipstick Test 10 | synonyms: 11 | - Urine Test Strip 12 | definition: "Use of a test strip designed to detect one or more specific substances in urine. Results are indicated by a color change and may be qualitative or semi-quantitative." 13 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_lb_c17241.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C17241 4 | ncitCode: C17241 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C17241 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | shortName: Urinalysis 10 | synonyms: 11 | - Urine Test 12 | - UA 13 | definition: A test that determines the content of the urine. 14 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_lb_c28133.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C28133 4 | ncitCode: C28133 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C28133 6 | parentConceptId: C49286 7 | categories: 8 | - Laboratory Tests 9 | shortName: Blood Cell Count 10 | synonyms: 11 | - Complete Blood Count 12 | - CBC 13 | - Full Blood Count 14 | - FBC 15 | definition: The determination of the number of red blood cells, white blood cells, and platelets in a biospecimen. 16 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_lb_c49237.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C49237 4 | ncitCode: C49237 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C49237 6 | categories: 7 | - Laboratory Tests 8 | shortName: Chemistry Test 9 | synonyms: 10 | - Chemistry Measurement 11 | - Chemistry Procedure 12 | - Chemistry Technique 13 | definition: A laboratory test designed for the quantification of an organic or inorganic chemical within a biological specimen. 14 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_lb_c49286.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C49286 4 | ncitCode: C49286 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C49286 6 | categories: 7 | - Laboratory Tests 8 | shortName: Hematology Test 9 | synonyms: 10 | - Blood Test 11 | - Hematology Procedure 12 | definition: A laboratory test to measure hematopoietic components and investigate hematologic disorders in a blood sample. 13 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_lb_c74946.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C74946 4 | ncitCode: C74946 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74946 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | shortName: Electrolyte Measurement 10 | resultScales: 11 | - Quantitative 12 | definition: A quantitative measurement of the amount of an electrolyte present in a sample. 13 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_lb_c74954.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C74954 4 | ncitCode: C74954 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74954 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | shortName: Liver Function Test 10 | resultScales: 11 | - Quantitative 12 | definition: The quantitative measurement of liver enzymes in the blood, which is useful in assessing the functional state of a patient's liver. Liver function tests include the measurement of albumin, alanine transaminase, aspartate transaminase, alkaline phosphatase 13 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_vs_c49672.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C49672 4 | ncitCode: C49672 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C49672 6 | categories: 7 | - Vital Signs 8 | shortName: Vital Signs Measurement 9 | synonyms: 10 | - Vital Signs 11 | - VS 12 | definition: The act of assessing an individual's current temperature, heart rate, respiratory rate, pulse oxygenation, and blood pressure. 13 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_vs_c49680.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C49680 4 | ncitCode: C49680 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C49680 6 | categories: 7 | - Vital Signs 8 | shortName: Body Frame Size 9 | synonyms: 10 | - Frame Size 11 | resultScales: 12 | - Ordinal 13 | definition: The categorization of a person's body frame into small, medium and large based on the measurement of wrist circumference or the breadth of the elbow. 14 | dataElementConcepts: 15 | - conceptId: C173522 16 | ncitCode: C173522 17 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C173522 18 | shortName: Vital Signs Result 19 | dataType: string 20 | exampleSet: 21 | - "Small" 22 | - "Medium" 23 | - "Large" 24 | -------------------------------------------------------------------------------- /yaml/20221026/bc/biomedical_concept_vs_c54706.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2022-10-26" 2 | packageType: bc 3 | conceptId: C54706 4 | ncitCode: C54706 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C54706 6 | parentConceptId: C49672 7 | categories: 8 | - Vital Signs 9 | shortName: Blood Pressure 10 | synonyms: 11 | - BP 12 | definition: "The force of circulating blood on the walls of the arteries. Blood pressure is taken using two measurements: systolic (measured when the heart beats, when blood pressure is at its highest) and diastolic (measured between heart beats, when blood pressure is at its lowest). Blood pressure is written with the systolic blood pressure first, followed by the diastolic blood pressure (for example 120/80)." 13 | coding: 14 | - code: 55284-4 15 | system: http://loinc.org/ 16 | systemName: LOINC 17 | -------------------------------------------------------------------------------- /yaml/20230213/bc/biomedical_concept_lb_2_c74675.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-02-13" 2 | packageType: bc 3 | conceptId: C74675 4 | ncitCode: C74675 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74675 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | shortName: Drug Class Measurement 11 | definition: The determination of the levels of all members of a specific drug class present in a sample. 12 | -------------------------------------------------------------------------------- /yaml/20230213/bc/biomedical_concept_lb_2_c75342.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-02-13" 2 | packageType: bc 3 | conceptId: C75342 4 | ncitCode: C75342 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C75342 6 | parentConceptId: C74675 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | - Drug Class Measurements 11 | shortName: CNS Stimulant Drug Measurement 12 | definition: The determination of the amount of any drug that affects the central nervous system (CNS) present in a sample. 13 | -------------------------------------------------------------------------------- /yaml/20230213/bc/biomedical_concept_lb_2_c82624.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-02-13" 2 | packageType: bc 3 | conceptId: C82624 4 | ncitCode: C82624 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C82624 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | - Gas Measurements 11 | shortName: Gas Measurement 12 | synonyms: 13 | - Gas 14 | definition: A quantitative measurement of the amount of an electrolyte present in a sample. 15 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_ae_c36291.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C36291 4 | ncitCode: C36291 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C36291 6 | categories: 7 | - Findings 8 | shortName: Finding by Cause 9 | definition: Finding by cause. 10 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_cm_c25218.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C25218 4 | ncitCode: C25218 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C25218 6 | categories: 7 | - Procedures 8 | - Interventions 9 | shortName: Intervention or Procedure 10 | synonyms: 11 | - Procedure 12 | - Intervention 13 | definition: An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects. 14 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_cm_c49236.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C49236 4 | ncitCode: C49236 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C49236 6 | parentConceptId: C25218 7 | categories: 8 | - Procedures 9 | - Interventions 10 | shortName: Therapeutic Procedure 11 | synonyms: 12 | - Treatment 13 | - Therapeutic Intervention 14 | definition: An action or administration of therapeutic agents to produce an effect that is intended to alter or stop a pathologic process. 15 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_dm_c17049.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C17049 4 | ncitCode: C17049 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C17049 6 | categories: 7 | - Demographic Data 8 | - Demographics 9 | - Population Group 10 | shortName: Race 11 | synonyms: 12 | - Racial Group 13 | resultScales: 14 | - Nominal 15 | definition: A geographic ancestral origin category that is assigned to a population group based mainly on physical characteristics that are thought to be distinct and inherent. 16 | dataElementConcepts: 17 | - conceptId: C17049 18 | ncitCode: C17049 19 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C17049 20 | shortName: Race 21 | dataType: string 22 | exampleSet: 23 | - "Asian" 24 | - "Black or African American" 25 | - "White" 26 | - "American Indian or Alaska Native" 27 | - "Unknown" 28 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_dm_c28421.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C28421 4 | ncitCode: C28421 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C28421 6 | categories: 7 | - Demographic Data 8 | - Demographics 9 | - Personal Attribute 10 | shortName: Sex 11 | resultScales: 12 | - Nominal 13 | definition: The assemblage of physical properties or qualities by which male is distinguished from female; the physical difference between male and female; the distinguishing peculiarity of male or female. 14 | dataElementConcepts: 15 | - conceptId: C28421 16 | ncitCode: C28421 17 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C28421 18 | shortName: Sex 19 | dataType: string 20 | exampleSet: 21 | - "Male" 22 | - "Female" 23 | - "Unknown" 24 | - "Undifferentiated" 25 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_ds_c74588.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C74588 4 | ncitCode: C74588 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74588 6 | categories: 7 | - Subject Disposition 8 | - Protocol Milestones 9 | shortName: Protocol Milestone 10 | definition: "Occurrences within some epochs that are initiated by a protocol-specified event. The most common protocol milestone is \"Informed Consent Obtained\" which usually documents the start of the study." 11 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_ds_c74590.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C74590 4 | ncitCode: C74590 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74590 6 | categories: 7 | - Subject Disposition 8 | - Protocol Disposition Events 9 | shortName: Protocol Disposition Event 10 | synonyms: 11 | - Disposition Event 12 | definition: The group of incidents that occur during a clinical trial and describe whether a subject completed the study epoch or the reason this event did not occur. The subject's disposition is often described for each phase of the study. 13 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_eg_c25391.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C25391 4 | ncitCode: C25391 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C25391 6 | categories: 7 | - Analysis 8 | shortName: Analysis 9 | synonyms: 10 | - Analytical 11 | - Analyzed 12 | definition: Examination and interpretation; the process of identifying an issue to be understood and addressed, modelling the issue, investigating the model results, interpreting the results, and possibly making a recommendation. The concept also refers to the examination and study of a whole in terms of the parts composing it. 13 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_eg_c62085.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C62085 4 | ncitCode: C62085 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C62085 6 | categories: 7 | - Electrocardiogram Findings 8 | shortName: ECG Measurement 9 | synonyms: 10 | - Electrocardiogram Measurement 11 | - EKG Measurement 12 | definition: Measurements or calculations on measurements obtained from electrocardiographic tracings 13 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_lb_c147128.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C147128 4 | ncitCode: C147128 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C147128 6 | categories: 7 | - Laboratory Tests 8 | - Chemistry Tests 9 | - Hormone Measurements 10 | - Choriogonadotropin Measurements 11 | - HCG Measurements 12 | shortName: Choriogonadotropin Measurement 13 | synonyms: 14 | - Choriogonadotropin 15 | - Human Chorionic Gonadotropin 16 | - HCGND 17 | definition: The determination of the amount of choriogonadotropin present in a sample. 18 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_lb_c64430.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C64430 4 | ncitCode: C64430 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C64430 6 | categories: 7 | - Laboratory Tests 8 | - Chemistry Tests 9 | shortName: Protein or Enzyme Type Measurement 10 | definition: A term that refers to a chemistry test measuring a specific protein or enzyme in the peripheral blood or body fluid. 11 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_lb_c74804.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C74804 4 | ncitCode: C74804 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74804 6 | categories: 7 | - Laboratory Tests 8 | - Chemistry Tests 9 | shortName: Cytokine Measurement 10 | definition: The determination of type and amount of cytokines in a sample. 11 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_mb_c171456.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C171456 4 | ncitCode: C171456 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C171456 6 | parentConceptId: C49188 7 | categories: 8 | - Laboratory Tests 9 | - Microbiology Tests 10 | - Virology Tests 11 | - COVID-19 Tests 12 | - SARS-CoV-2 Tests 13 | shortName: Coronaviridae Measurement 14 | definition: The determination of the amount of coronaviridae in a sample. 15 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_mb_c49188.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C49188 4 | ncitCode: C49188 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C49188 6 | categories: 7 | - Microbiology Tests 8 | shortName: Microbiology Test 9 | synonyms: 10 | - Laboratory Testing 11 | - Microbiology 12 | definition: A laboratory procedure to detect microorganisms in a sample. 13 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_mh_c82571.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C82571 4 | ncitCode: C82571 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C82571 6 | categories: 7 | - Reported Events 8 | - Medical History Events 9 | - Medical Conditions 10 | - Presenting Conditions 11 | shortName: Reported Event Term 12 | definition: The collected name for an event observation. 13 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_pr_c16502.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C16502 4 | ncitCode: C16502 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C16502 6 | categories: 7 | - Diagnostic Imaging 8 | - Medical Imaging 9 | shortName: Diagnostic Imaging 10 | synonyms: 11 | - Medical Imaging 12 | definition: Any method that uses a visual display of structural or functional patterns of organs or tissues for diagnostic evaluation. 13 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_re_c181043.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C181043 4 | ncitCode: C181043 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C181043 6 | categories: 7 | - Indicators 8 | shortName: Clinical Findings Indicator 9 | definition: Specifies whether a clinical finding was observed. 10 | -------------------------------------------------------------------------------- /yaml/20230331/bc/biomedical_concept_vs_c18020.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-03-31" 2 | packageType: bc 3 | conceptId: C18020 4 | ncitCode: C18020 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C18020 6 | categories: 7 | - Procedures 8 | shortName: Diagnostic Procedure 9 | synonyms: 10 | - Diagnostic Tests 11 | definition: Any procedure or test to diagnose a disease or disorder. 12 | -------------------------------------------------------------------------------- /yaml/20230706_nononco/bc/biomedical_concept_ae_c41331.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C41331 4 | ncitCode: C41331 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C41331 6 | parentConceptId: C36291 7 | categories: 8 | - Events 9 | - Reported Events 10 | - Adverse Events 11 | shortName: Adverse Event 12 | definition: Any unfavorable or unintended disease, sign, or symptom (including an abnormal laboratory finding) that is temporally associated with the use of a medical treatment or procedure, and that may or may not be considered related to the medical treatment or procedure. Such events can be related to the intervention, dose, route of administration, patient, or caused by an interaction with another drug(s) or procedure(s). 13 | -------------------------------------------------------------------------------- /yaml/20230706_nononco/bc/biomedical_concept_ds_c150824.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C150824 4 | ncitCode: C150824 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C150824 6 | categories: 7 | - Subject Disposition 8 | - Non-Protocol Disposition Events 9 | shortName: Non-Protocol Disposition Event 10 | synonyms: 11 | - Other Event 12 | definition: The group of incidents that are not driven by the protocol but that may occur during a clinical trial and describe whether a subject completed the study epoch or the reason this event did not occur. 13 | -------------------------------------------------------------------------------- /yaml/20230706_nononco/bc/biomedical_concept_eg_c83146.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C83146 4 | ncitCode: C83146 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C83146 6 | categories: 7 | - Test Names 8 | shortName: Electrocardiogram Test 9 | synonyms: 10 | - EGTEST 11 | definition: A character or string that represents the full name of the ECG assessment. 12 | -------------------------------------------------------------------------------- /yaml/20230706_nononco/bc/biomedical_concept_lb_c45398.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C45398 4 | ncitCode: C45398 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C45398 6 | categories: 7 | - Laboratory Tests 8 | - Nitroso Carcinogens 9 | shortName: Carcinogenic Nitrosamine 10 | definition: "An organic N-nitroso compound with possible carcinogenic activity characterized by the group -NNO or -NHNO in its structure, formed by combining nitrates with amines. These compounds are found in various foods and many are carcinogenic or are suspected carcinogens. Cured meats can contain nitrosamines because meats contain amines and can react during cooking with sodium nitrite that is added as a preservative. (NCI05)" 11 | -------------------------------------------------------------------------------- /yaml/20230706_oncology/bc/biomedical_concept_recist_c135508.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C135508 4 | ncitCode: C135508 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C135508 6 | categories: 7 | - Findings 8 | - Status 9 | - Medical Status 10 | shortName: Organ State 11 | definition: A condition or state of an organ at a particular time. 12 | -------------------------------------------------------------------------------- /yaml/20230706_oncology/bc/biomedical_concept_recist_c171082.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C171082 4 | ncitCode: C171082 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C171082 6 | categories: 7 | - Findings 8 | - Status 9 | shortName: Medical Status 10 | definition: The status of a patient or subject with regard to their health or a medical procedure. 11 | -------------------------------------------------------------------------------- /yaml/20230706_oncology/bc/biomedical_concept_recist_c25180.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C25180 4 | ncitCode: C25180 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C25180 6 | categories: 7 | - Findings 8 | - Indicators 9 | shortName: Indicator 10 | definition: An event, entity or condition that typically characterizes a prescribed environment or situation and determines or aids in determining whether certain stated circumstances exist or criteria are satisfied. 11 | -------------------------------------------------------------------------------- /yaml/20230706_oncology/bc/biomedical_concept_recist_c25285.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C25285 4 | ncitCode: C25285 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C25285 6 | categories: 7 | - Properties 8 | - Quantitative Concepts 9 | shortName: Diameter 10 | definition: The length of a straight line passing through the center of a circle or sphere and connecting two points on the circumference. 11 | -------------------------------------------------------------------------------- /yaml/20230706_oncology/bc/biomedical_concept_recist_c35461.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C35461 4 | ncitCode: C35461 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C35461 6 | categories: 7 | - Findings 8 | - Clinical Courses 9 | shortName: Clinical Course of Disease 10 | definition: A term that refers to the nature and/or clinical outcome of a disease (e.g., acute or chronic disease, aggressive or indolent disease, recurrent disease, etc.). 11 | -------------------------------------------------------------------------------- /yaml/20230706_oncology/bc/biomedical_concept_recist_c50995.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C50995 4 | ncitCode: C50995 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C50995 6 | categories: 7 | - Findings 8 | - Clinical Course of Disease 9 | shortName: Disease Response 10 | definition: The pathologic and/or clinical changes that result from treatment. The changes may include eradication of detectable disease, stabilization of disease, or disease progression. 11 | -------------------------------------------------------------------------------- /yaml/20230706_oncology/bc/biomedical_concept_recist_c82547.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C82547 4 | ncitCode: C82547 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C82547 6 | categories: 7 | - Findings 8 | - Clinical Test Results 9 | shortName: Abnormal Finding 10 | definition: A decision that an observation or result is outside the parameters considered normal. 11 | -------------------------------------------------------------------------------- /yaml/20230706_oncology/bc/biomedical_concept_recist_c94189.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C94189 4 | ncitCode: C94189 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C94189 6 | categories: 7 | - Findings 8 | - Identification 9 | - Work-ups 10 | shortName: Lesion Identification 11 | definition: "The identification of a non-neoplastic or neoplastic pathologic process during the diagnostic work-up of a disease." 12 | -------------------------------------------------------------------------------- /yaml/20230706_oncology/bc/biomedical_concept_recist_c96557.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-07-06" 2 | packageType: bc 3 | conceptId: C96557 4 | ncitCode: C96557 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C96557 6 | categories: 7 | - Findings 8 | - Properties 9 | shortName: Perpendicular 10 | definition: At a right angle to a given line or plane. 11 | -------------------------------------------------------------------------------- /yaml/20231003_r5/bc/biomedical_concept_lb_c35553.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-10-03" 2 | packageType: bc 3 | conceptId: C35553 4 | ncitCode: C35553 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C35553 6 | categories: 7 | - Laboratory Tests 8 | - Abnormal Laboratory Test Results 9 | shortName: Abnormal Blood Chemistry and Hematology Test Result 10 | definition: A laboratory test result that indicates the presence of abnormal blood chemistry and/or hematology values. 11 | -------------------------------------------------------------------------------- /yaml/20231003_r5/bc/biomedical_concept_lb_c67208.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-10-03" 2 | packageType: bc 3 | conceptId: C67208 4 | ncitCode: C67208 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C67208 6 | parentConceptId: C28133 7 | categories: 8 | - Laboratory Tests 9 | - Hematology Tests 10 | - Blood Cell Counts 11 | - Blood Cell Count Ratio Measurements 12 | shortName: Blood Cell Count Ratio Measurement 13 | definition: The determination of the ratio of one blood cell component to another in a blood sample. The measurement may be expressed as either a ratio or a percentage. 14 | -------------------------------------------------------------------------------- /yaml/20231003_r5/bc/biomedical_concept_lb_c74742.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-10-03" 2 | packageType: bc 3 | conceptId: C74742 4 | ncitCode: C74742 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74742 6 | categories: 7 | - Laboratory Tests 8 | - Chemistry Tests 9 | - Endocrine Tests 10 | shortName: Hormone Measurement 11 | definition: The determination of the amount of hormone present in a sample. 12 | -------------------------------------------------------------------------------- /yaml/20231003_r5/bc/biomedical_concept_lb_c74803.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-10-03" 2 | packageType: bc 3 | conceptId: C74803 4 | ncitCode: C74803 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74803 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | shortName: Vitamin Measurement 11 | definition: The determination of the type and amount of vitamins in a sample. 12 | -------------------------------------------------------------------------------- /yaml/20231003_r5/bc/biomedical_concept_lb_c75385.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-10-03" 2 | packageType: bc 3 | conceptId: C75385 4 | ncitCode: C75385 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C75385 6 | parentConceptId: C74742 7 | categories: 8 | - Laboratory Tests 9 | - Gene Products 10 | shortName: Peptide Hormone Measurement 11 | definition: The determination of the amount of any peptide hormone present in a sample. 12 | -------------------------------------------------------------------------------- /yaml/20231003_r5/bc/biomedical_concept_mb_c154812.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-10-03" 2 | packageType: bc 3 | conceptId: C154812 4 | ncitCode: C154812 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C154812 6 | parentConceptId: C49188 7 | categories: 8 | - Laboratory Tests 9 | - Microbiology Tests 10 | shortName: Gram Negative Bacteria Measurement 11 | definition: "The determination of the gram-negative bacteria present in a sample." 12 | -------------------------------------------------------------------------------- /yaml/20231003_r5/bc/biomedical_concept_mb_c16723.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-10-03" 2 | packageType: bc 3 | conceptId: C16723 4 | ncitCode: C16723 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C16723 6 | categories: 7 | - Laboratory Tests 8 | shortName: Immunology Test 9 | definition: Laboratory test involving interaction of antigens with specific antibodies. 10 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_ie_c16112.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: C16112 4 | ncitCode: C16112 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C16112 6 | categories: 7 | - Eligibility Criteria 8 | - Clinical Trial Design 9 | shortName: Clinical Trial Eligibility Criteria 10 | synonyms: 11 | - Eligibility Criteria 12 | - Study Eligibility Criteria 13 | definition: Characteristics which are necessary to allow a subject to participate in a clinical study, as outlined in the study protocol. The concept covers inclusion and exclusion criteria. 14 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_lb_c158424.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: C158424 4 | ncitCode: C158424 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C158424 6 | categories: 7 | - Laboratory Tests 8 | - Physical Property 9 | shortName: Physical Property 10 | definition: Any of the characteristics that define the nature of matter or forces that act upon it. 11 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_lb_c60819.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: C60819 4 | ncitCode: C60819 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C60819 6 | categories: 7 | - Laboratory Tests 8 | - Mixed Category Laboratory Procedure 9 | - Assay 10 | shortName: Assay 11 | definition: A qualitative or quantitative analysis performed to determine the amount of a particular constituent in a sample or the biological or pharmacological properties of a drug. 12 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_lb_c74957.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: C74957 4 | ncitCode: C74957 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74957 6 | categories: 7 | - Laboratory Tests 8 | - Mixed Category Laboratory Procedure 9 | shortName: Mixed Category Laboratory Procedure 10 | definition: "A laboratory procedure that is performed in more than one of these laboratory specializations: anatomic pathology, clinical pathology, or molecular pathology." 11 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_lb_edits_c74954.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: C74954 4 | ncitCode: C74954 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74954 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | shortName: Liver Function Test 10 | resultScales: 11 | - Quantitative 12 | definition: The quantitative measurement of liver enzymes in the blood, which is useful in assessing the functional state of a patient's liver. Liver function tests include the measurement of albumin, alanine transaminase, aspartate transaminase, alkaline phosphatase, bilirubin, and gamma glutamyl transferase. 13 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_qs_new_lzzt.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: NEW_LZZT 4 | categories: 5 | - Questionnaires 6 | - Surveys 7 | - Informational Interventions 8 | shortName: TTS Acceptability Survey 9 | definition: A survey to assess a caregiver's response about the acceptability of using a transdermal patch to treat Alzheimer's patients. 10 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_sc_c17468.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: C17468 4 | ncitCode: C17468 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C17468 6 | categories: 7 | - Subject Characteristics 8 | - Social Circumstances 9 | shortName: Socioeconomic Factors 10 | synonyms: 11 | - Socioeconomic Status 12 | definition: Characteristics of a person such as education and occupation, used to describe the person's position in stratification systems, access to services, etc. 13 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_vs_edits_c49672.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: C49672 4 | ncitCode: C49672 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C49672 6 | categories: 7 | - Vital Signs 8 | shortName: Vital Signs Measurement 9 | synonyms: 10 | - Vital Signs 11 | - VS 12 | definition: The act of assessing an individual's current temperature, heart rate, respiratory rate, pulse oxygenation, and blood pressure. 13 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_vs_edits_c49680.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: C49680 4 | ncitCode: C49680 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C49680 6 | categories: 7 | - Vital Signs 8 | shortName: Body Frame Size 9 | synonyms: 10 | - Frame Size 11 | resultScales: 12 | - Ordinal 13 | definition: The categorization of a person's body frame into small, medium and large based on the measurement of wrist circumference or the breadth of the elbow. 14 | dataElementConcepts: 15 | - conceptId: C77140 16 | ncitCode: C77140 17 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C77140 18 | shortName: Clinical Test Result 19 | dataType: string 20 | exampleSet: 21 | - "Small" 22 | - "Medium" 23 | - "Large" 24 | -------------------------------------------------------------------------------- /yaml/20231212_r6/bc/biomedical_concept_vs_edits_c54706.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2023-12-12" 2 | packageType: bc 3 | conceptId: C54706 4 | ncitCode: C54706 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C54706 6 | parentConceptId: C49672 7 | categories: 8 | - Vital Signs 9 | shortName: Blood Pressure 10 | synonyms: 11 | - BP 12 | definition: The pressure of the circulating blood against the walls of the blood vessels. 13 | coding: 14 | - code: 55284-4 15 | system: http://loinc.org/ 16 | systemName: LOINC 17 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c116142.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C116142 4 | ncitCode: C116142 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C116142 6 | parentConceptId: C81239 7 | categories: 8 | - Cause of Death 9 | shortName: Secondary Cause of Death 10 | synonyms: 11 | - SECDTH 12 | resultScales: 13 | - Nominal 14 | definition: The second significant event which ultimately led to death. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C70856 19 | shortName: Observation Result 20 | dataType: string 21 | exampleSet: 22 | - "Congestive Heart Failure" 23 | - conceptId: C82515 24 | ncitCode: C82515 25 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C82515 26 | shortName: Collection Date Time 27 | dataType: datetime 28 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c176287.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C176287 4 | ncitCode: C176287 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C176287 6 | parentConceptId: C25683 7 | categories: 8 | - Source 9 | shortName: Information Source for Cause of Death 10 | synonyms: 11 | - INFOSCOD 12 | - cause of death source 13 | resultScales: 14 | - Nominal 15 | definition: The authoritative source that provided the cause of death information. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C70856 20 | shortName: Observation Result 21 | dataType: string 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c184505.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C184505 4 | ncitCode: C184505 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C184505 6 | parentConceptId: C93565 7 | categories: 8 | - Expected Indicator 9 | shortName: Death Expected Indicator 10 | synonyms: 11 | - DTHEXIND 12 | resultScales: 13 | - Ordinal 14 | definition: An indication as to whether the death was expected. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C70856 19 | shortName: Observation Result 20 | dataType: string 21 | exampleSet: 22 | - "N" 23 | - "Y" 24 | - "U" 25 | - conceptId: C82515 26 | ncitCode: C82515 27 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C82515 28 | shortName: Collection Date Time 29 | dataType: datetime 30 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c25150.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C25150 4 | ncitCode: C25150 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C25150 6 | categories: 7 | - Age 8 | shortName: Age 9 | definition: How long something has existed; elapsed time since birth. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c25180.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C25180 4 | ncitCode: C25180 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C25180 6 | categories: 7 | - Indicator 8 | shortName: Indicator 9 | definition: An event, entity or condition that typically characterizes a prescribed environment or situation and determines or aids in determining whether certain stated circumstances exist or criteria are satisfied. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c25341.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C25341 4 | ncitCode: C25341 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C25341 6 | categories: 7 | - Location 8 | shortName: Location 9 | definition: A position, site, or point in space where something can be found. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c25683.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C25683 4 | ncitCode: C25683 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C25683 6 | categories: 7 | - Source 8 | shortName: Source 9 | definition: Where something is available or from where it originates. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c81239.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C81239 4 | ncitCode: C81239 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C81239 6 | categories: 7 | - Cause of Death 8 | shortName: Cause of Death 9 | definition: The circumstance or condition that results in the death of a living being. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c93546.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C93546 4 | ncitCode: C93546 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C93546 6 | categories: 7 | - Death Indicator 8 | shortName: Death Indicator 9 | definition: Specifies whether the life of an entity has ceased. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_dd_c93565.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C93565 4 | ncitCode: C93565 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C93565 6 | categories: 7 | - Expected Indicator 8 | shortName: Expected Indicator 9 | definition: Specifies whether the entity, event or activity is considered probable or likely. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_facv_c111095.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C111095 4 | ncitCode: C111095 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C111095 6 | categories: 7 | - Clot Detection 8 | shortName: Clot Detection 9 | definition: Any of several methods used to detect the presence of or quantify the formation of a thrombus in a specimen. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_facv_c25284.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C25284 4 | ncitCode: C25284 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C25284 6 | categories: 7 | - Type 8 | shortName: Type 9 | definition: Something distinguishable as an identifiable class based on common qualities. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_facv_c35552.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C35552 4 | ncitCode: C35552 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C35552 6 | categories: 7 | - Cardiovascular System Finding 8 | shortName: Cardiovascular System Finding 9 | definition: Symptoms, physical examination results, and/or laboratory test results related to the cardiovascular system. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_facv_c36292.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C36292 4 | ncitCode: C36292 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C36292 6 | categories: 7 | - Laboratory Test Result 8 | shortName: Laboratory Test Result 9 | definition: The outcome of a laboratory test. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_facv_c4876.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C4876 4 | ncitCode: C4876 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C4876 6 | categories: 7 | - Symptom 8 | shortName: Symptom 9 | definition: Subjective evidence of disease perceived by the patient. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_facv_c77140.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C77140 4 | ncitCode: C77140 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C77140 6 | categories: 7 | - Clinical Test Result 8 | shortName: Clinical Test Result 9 | definition: The result of a laboratory, radiologic, or other clinical test performed to determine the presence, absence, or degree of a condition. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_facv_c83119.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C83119 4 | ncitCode: C83119 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C83119 6 | categories: 7 | - Physical Examination Finding 8 | shortName: Physical Examination Finding 9 | definition: The result of an evaluation of the body and its functions using visual inspection, palpation, percussion, or auscultation that is performed to determine the presence, absence, or degree of a condition. 10 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_gf_c17248.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C17248 4 | ncitCode: C17248 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C17248 6 | categories: 7 | - Genetic Variation 8 | shortName: Genetic Variation 9 | synonyms: 10 | - Genetic Diversity 11 | - Sequence Variant 12 | - Sequence Variation 13 | - Variant Classification 14 | definition: Genetic Variation consists of deviation(s) in the nucleotide sequence of the genetic material of an individual from that typical of the group to which the individual belongs, or deviation(s) in the nucleotide sequence of the genetic material of offspring from that of its parents. 15 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_gf_c18302.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C18302 4 | ncitCode: C18302 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C18302 6 | categories: 7 | - Genetic Variation Analysis 8 | shortName: Genetic Variation Analysis 9 | synonyms: 10 | - Mutation Analysis 11 | definition: The identification of genetic variation in a biological sample. 12 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_gf_c21049.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C21049 4 | ncitCode: C21049 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C21049 6 | categories: 7 | - Biochemical Process 8 | shortName: Gene Expression Process 9 | synonyms: 10 | - Gene Expression 11 | definition: Any subcellular or molecular event or process specifically, primarily, and directly designed for and involved in the production of mature functional biomolecular products encoded by a gene. 12 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_gf_c28614.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C28614 4 | ncitCode: C28614 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C28614 6 | parentConceptId: C21049 7 | categories: 8 | - Gene Expression Process 9 | - Transcription Process 10 | shortName: Transcription Process 11 | definition: A Transcription Process is any cellular event or activity directly involved in the synthesis a nascent RNA transcript. 12 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_gf_c63331.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C63331 4 | ncitCode: C63331 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C63331 6 | categories: 7 | - Molecular Analysis 8 | - Microsatellite Instability Analysis 9 | shortName: Microsatellite Instability Analysis 10 | definition: A laboratory procedure to detect microsatellite instability. 11 | -------------------------------------------------------------------------------- /yaml/20240402_r7/bc/biomedical_concept_bc_gf_c63479.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-04-02" 2 | packageType: bc 3 | conceptId: C63479 4 | ncitCode: C63479 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C63479 6 | categories: 7 | - Gene Expression Analysis 8 | shortName: Gene Expression Analysis 9 | definition: Gene Expression Analysis 10 | -------------------------------------------------------------------------------- /yaml/20240627_r8/bc/bc_c171082_rs_rano.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-06-27" 2 | packageType: bc 3 | conceptId: C171082 4 | ncitCode: C171082 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C171082 6 | categories: 7 | - Oncology Standards 8 | - Disease Response 9 | - Disease Response Criteria 10 | - Disease Response and Clinical Classification 11 | - RS 12 | shortName: Medical Status 13 | definition: The status of a patient or subject with regard to their health or a medical procedure. 14 | -------------------------------------------------------------------------------- /yaml/20240627_r8/bc/bc_c181043_rs_lugano.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-06-27" 2 | packageType: bc 3 | conceptId: C181043 4 | ncitCode: C181043 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C181043 6 | categories: 7 | - Oncology Standards 8 | - Disease Response 9 | - Disease Response Criteria 10 | - Disease Response and Clinical Classification 11 | - RS 12 | shortName: Clinical Findings Indicator 13 | definition: Specifies whether a clinical finding was observed. 14 | -------------------------------------------------------------------------------- /yaml/20240627_r8/bc/bc_c50995_rs_lugano.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-06-27" 2 | packageType: bc 3 | conceptId: C50995 4 | ncitCode: C50995 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C50995 6 | categories: 7 | - Oncology Standards 8 | - Disease Response 9 | - Disease Response Criteria 10 | - Disease Response and Clinical Classification 11 | - RS 12 | shortName: Disease Response 13 | definition: The pathologic and/or clinical changes that result from treatment. The changes may include eradication of detectable disease, stabilization of disease, or disease progression. 14 | -------------------------------------------------------------------------------- /yaml/20240627_r8/bc/bc_c74949_updates2.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-06-27" 2 | packageType: bc 3 | conceptId: C74949 4 | ncitCode: C74949 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C74949 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | - Lipid Measurements 11 | shortName: Lipid Measurement 12 | synonyms: 13 | - LIPID 14 | - Total Lipid 15 | resultScales: 16 | - Quantitative 17 | definition: A quantitative measurement of the amount of lipids (cholesterol, lipoproteins, and triglycerides) present in a sample. 18 | -------------------------------------------------------------------------------- /yaml/20240627_r8/bc/bc_c83430_rs_rano.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-06-27" 2 | packageType: bc 3 | conceptId: C83430 4 | ncitCode: C83430 5 | href: https://ncithesaurus.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C83430 6 | categories: 7 | - Oncology Standards 8 | - Disease Response 9 | - Disease Response Criteria 10 | - Disease Response and Clinical Classification 11 | - RS 12 | shortName: Substance Use Status 13 | definition: A term used to describe the state or condition of substance use data. 14 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c116142_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C116142 4 | ncitCode: C116142 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C116142 6 | parentConceptId: C81239 7 | categories: 8 | - Death Diagnosis and Details 9 | - Cause of Death 10 | shortName: Secondary Cause of Death 11 | synonyms: 12 | - SECDTH 13 | resultScales: 14 | - Nominal 15 | definition: The second significant event which ultimately led to death. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: string 22 | exampleSet: 23 | - "Congestive Heart Failure" 24 | - conceptId: C82515 25 | ncitCode: C82515 26 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 27 | shortName: Collection Date Time 28 | dataType: datetime 29 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c124331_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C124331 4 | ncitCode: C124331 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C124331 6 | parentConceptId: C25341 7 | categories: 8 | - Death Diagnosis and Details 9 | - Location 10 | shortName: Location of Death 11 | synonyms: 12 | - LOCDTH 13 | - Location of Death 14 | resultScales: 15 | - Ordinal 16 | definition: The physical place at which the subject ceased to live. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "Clinic" 25 | - "Home" 26 | - "Hospital" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c135385_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C135385 4 | ncitCode: C135385 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C135385 6 | parentConceptId: C25180 7 | categories: 8 | - Death Diagnosis and Details 9 | - Indicator 10 | shortName: Death Certification Indicator 11 | synonyms: 12 | - DTHCOIND 13 | - Death Certificate Obtained Indicator 14 | resultScales: 15 | - Ordinal 16 | definition: An indication as to whether a death certificate was obtained. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c170571_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C170571 4 | ncitCode: C170571 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C170571 6 | parentConceptId: C25180 7 | categories: 8 | - Death Diagnosis and Details 9 | - Indicator 10 | shortName: Death Witnessed Indicator 11 | synonyms: 12 | - DTHWIND 13 | resultScales: 14 | - Ordinal 15 | definition: An indication as to whether the death event was witnessed by another individual. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: string 22 | exampleSet: 23 | - "N" 24 | - "Y" 25 | - "U" 26 | - conceptId: C82515 27 | ncitCode: C82515 28 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 29 | shortName: Collection Date Time 30 | dataType: datetime 31 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c171521_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C171521 4 | ncitCode: C171521 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C171521 6 | parentConceptId: C181043 7 | categories: 8 | - Clinical Findings Indicators 9 | - Respiratory Findings 10 | shortName: Pneumonia Indicator 11 | synonyms: 12 | - PNEUMIND 13 | resultScales: 14 | - Nominal 15 | definition: An indication as to whether pneumonia has occurred. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: string 22 | exampleSet: 23 | - "Y" 24 | - "N" 25 | - "Unknown" 26 | - conceptId: C82535 27 | ncitCode: C82535 28 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82535 29 | shortName: Test Method 30 | dataType: string 31 | exampleSet: 32 | - "X-Ray" 33 | - "CT Scan" 34 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c174284_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C174284 4 | ncitCode: C174284 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C174284 6 | parentConceptId: C93546 7 | categories: 8 | - Death Diagnosis and Details 9 | - Death Indicator 10 | shortName: Sudden Death Indicator 11 | synonyms: 12 | - SDTHIND 13 | resultScales: 14 | - Ordinal 15 | definition: An indication as to whether death was unexpected or occurred without warning. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: string 22 | exampleSet: 23 | - "N" 24 | - "Y" 25 | - "U" 26 | - conceptId: C82515 27 | ncitCode: C82515 28 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 29 | shortName: Collection Date Time 30 | dataType: datetime 31 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c176287_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C176287 4 | ncitCode: C176287 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C176287 6 | parentConceptId: C25683 7 | categories: 8 | - Death Diagnosis and Details 9 | - Source 10 | shortName: Information Source for Cause of Death 11 | synonyms: 12 | - INFOSCOD 13 | - cause of death source 14 | resultScales: 15 | - Nominal 16 | definition: The authoritative source that provided the cause of death information. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | - conceptId: C82515 24 | ncitCode: C82515 25 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 26 | shortName: Collection Date Time 27 | dataType: datetime 28 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c184505_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C184505 4 | ncitCode: C184505 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C184505 6 | parentConceptId: C93565 7 | categories: 8 | - Death Diagnosis and Details 9 | - Expected Indicator 10 | shortName: Death Expected Indicator 11 | synonyms: 12 | - DTHEXIND 13 | resultScales: 14 | - Ordinal 15 | definition: An indication as to whether the death was expected. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: string 22 | exampleSet: 23 | - "N" 24 | - "Y" 25 | - "U" 26 | - conceptId: C82515 27 | ncitCode: C82515 28 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 29 | shortName: Collection Date Time 30 | dataType: datetime 31 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c198258_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C198258 4 | ncitCode: C198258 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C198258 6 | parentConceptId: C25180 7 | categories: 8 | - Death Diagnosis and Details 9 | - Indicator 10 | shortName: Hospitalized at Time of Death Indicator 11 | synonyms: 12 | - HSDTHIND 13 | resultScales: 14 | - Ordinal 15 | definition: An indication as to whether the subject was hospitalized at the time of death. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: string 22 | exampleSet: 23 | - "N" 24 | - "Y" 25 | - "U" 26 | - conceptId: C82515 27 | ncitCode: C82515 28 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 29 | shortName: Collection Date Time 30 | dataType: datetime 31 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c210010_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C210010 4 | ncitCode: C210010 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C210010 6 | categories: 7 | - Laboratory Tests 8 | - Immunology Tests 9 | shortName: Antibody Measurement 10 | definition: The determination of the amount of antibodies in a sample. 11 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c25208_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C25208 4 | ncitCode: C25208 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C25208 6 | categories: 7 | - Vital Signs 8 | shortName: Weight 9 | resultScales: 10 | - Quantitative 11 | definition: The vertical force exerted by a mass as a result of gravity. 12 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c25347_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C25347 4 | ncitCode: C25347 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C25347 6 | categories: 7 | - Characteristics 8 | shortName: Height 9 | resultScales: 10 | - Quantitative 11 | definition: The vertical measurement or distance from the base to the top of an object; the vertical dimension of extension. 12 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c49672_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C49672 4 | ncitCode: C49672 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C49672 6 | categories: 7 | - Vital Signs 8 | shortName: Vital Signs Measurement 9 | synonyms: 10 | - Vital Signs 11 | - VS 12 | definition: The act of assessing an individual's current temperature, heart rate, respiratory rate, pulse oxygenation, and blood pressure. 13 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c49680_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C49680 4 | ncitCode: C49680 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C49680 6 | categories: 7 | - Vital Signs 8 | shortName: Body Frame Size 9 | synonyms: 10 | - Frame Size 11 | resultScales: 12 | - Ordinal 13 | definition: The categorization of a person's body frame into small, medium and large based on the measurement of wrist circumference or the breadth of the elbow. 14 | dataElementConcepts: 15 | - conceptId: C82515 16 | ncitCode: C82515 17 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 18 | shortName: Collection Date Time 19 | dataType: datetime 20 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c54706_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C54706 4 | ncitCode: C54706 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C54706 6 | parentConceptId: C49672 7 | categories: 8 | - Vital Signs 9 | shortName: Blood Pressure 10 | synonyms: 11 | - BP 12 | definition: The pressure of the circulating blood against the walls of the blood vessels. 13 | coding: 14 | - code: 55284-4 15 | system: http://loinc.org/ 16 | systemName: LOINC 17 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c69260_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C69260 4 | ncitCode: C69260 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C69260 6 | parentConceptId: C25150 7 | categories: 8 | - Demographic Data 9 | - Demographics 10 | - Personal Attribute 11 | - Age 12 | shortName: Subject Age 13 | synonyms: 14 | - Age 15 | resultScales: 16 | - Quantitative 17 | definition: The age of a person who is the subject in a study. 18 | dataElementConcepts: 19 | - conceptId: C170981 20 | ncitCode: C170981 21 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C170981 22 | shortName: Numeric Age for Data Tabulation 23 | dataType: decimal 24 | - conceptId: C50400 25 | ncitCode: C50400 26 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C50400 27 | shortName: Age Unit 28 | dataType: string 29 | exampleSet: 30 | - "Years" 31 | - "Months" 32 | - "Weeks" 33 | - "Days" 34 | -------------------------------------------------------------------------------- /yaml/20241216_r9/bc/bc_c99531_pr_updates.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-16" 2 | packageType: bc 3 | conceptId: C99531 4 | ncitCode: C99531 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C99531 6 | parentConceptId: C81239 7 | categories: 8 | - Death Diagnosis and Details 9 | - Cause of Death 10 | shortName: Primary Cause of Death 11 | synonyms: 12 | - PRCDTH 13 | - Primary 14 | resultScales: 15 | - Nominal 16 | definition: The first significant event which ultimately led to death. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "Sudden Cardiac Death" 25 | - "Cardiac Arrhythmia" 26 | - conceptId: C82515 27 | ncitCode: C82515 28 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 29 | shortName: Collection Date Time 30 | dataType: datetime 31 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c106508_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C106508 4 | ncitCode: C106508 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C106508 6 | parentConceptId: C19332 7 | categories: 8 | - Reproductive Findings 9 | shortName: Childbearing Potential 10 | synonyms: 11 | - CHILDPOT 12 | resultScales: 13 | - Ordinal 14 | definition: An indicator as to whether the female subject has the potential to become pregnant. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: string 21 | exampleSet: 22 | - "N" 23 | - "Y" 24 | - "U" 25 | - conceptId: C82515 26 | ncitCode: C82515 27 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 28 | shortName: Collection Date Time 29 | dataType: datetime 30 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c106541_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C106541 4 | ncitCode: C106541 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C106541 6 | parentConceptId: C117720 7 | categories: 8 | - Reproductive Findings 9 | shortName: Menopause Status 10 | synonyms: 11 | - MENOSTAT 12 | resultScales: 13 | - Nominal 14 | definition: An indicator as to whether the female subject is in menopause. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: string 21 | exampleSet: 22 | - "Perimenopausal" 23 | - "Premenopausal" 24 | - "Postmenopausal" 25 | - conceptId: C82515 26 | ncitCode: C82515 27 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 28 | shortName: Collection Date Time 29 | dataType: datetime 30 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c106550_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C106550 4 | ncitCode: C106550 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C106550 6 | parentConceptId: C25337 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Abortions 10 | synonyms: 11 | - ABORTN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of instances in which there has been a termination of pregnancy happening before the fetus is able to sustain independent life. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c106551_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C106551 4 | ncitCode: C106551 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C106551 6 | parentConceptId: C25337 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Pregnancies 10 | synonyms: 11 | - PREGNN 12 | - Maternal Gravity 13 | - Pregnancy Count 14 | - Total Number of Pregnancies 15 | resultScales: 16 | - Quantitative 17 | definition: A measurement of the total number of pregnancy events experienced by the female subject. 18 | dataElementConcepts: 19 | - conceptId: C70856 20 | ncitCode: C70856 21 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 22 | shortName: Observation Result 23 | dataType: integer 24 | - conceptId: C82515 25 | ncitCode: C82515 26 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 27 | shortName: Collection Date Time 28 | dataType: datetime 29 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c106561_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C106561 4 | ncitCode: C106561 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C106561 6 | parentConceptId: C19332 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Pregnant During the Study 12 | synonyms: 13 | - PREGST 14 | resultScales: 15 | - Ordinal 16 | definition: An indicator as to whether the female subject is pregnant during the study period. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c117720_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C117720 4 | ncitCode: C117720 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C117720 6 | categories: 7 | - Reproductive Findings 8 | shortName: Female Reproductive System Finding 9 | definition: Symptoms, physical examination results, and/or laboratory test results related to the female reproductive system. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c119241_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C119241 4 | ncitCode: C119241 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C119241 6 | categories: 7 | - Indicator 8 | shortName: Symptom Indicator 9 | definition: An indication as to whether the subject had symptoms related to the clinical event of interest. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c120716_sr.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C120716 4 | ncitCode: C120716 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C120716 6 | categories: 7 | - Mean Diameter 8 | shortName: Mean Diameter 9 | definition: The arithmetic mean of a range of values that describe the diameter of an entity. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c120832_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C120832 4 | ncitCode: C120832 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C120832 6 | parentConceptId: C106551 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Ectopic Pregnancies 10 | synonyms: 11 | - ECTPREGN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of ectopic pregnancies experienced by a female subject. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c120833_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C120833 4 | ncitCode: C120833 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C120833 6 | categories: 7 | - Reproductive Findings 8 | shortName: Estimated Date of Conception 9 | synonyms: 10 | - EDCDTC 11 | resultScales: 12 | - Temporal 13 | definition: An approximate calculated date at which the conception event took place. 14 | dataElementConcepts: 15 | - conceptId: C70856 16 | ncitCode: C70856 17 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 18 | shortName: Observation Result 19 | dataType: datetime 20 | - conceptId: C82515 21 | ncitCode: C82515 22 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 23 | shortName: Collection Date Time 24 | dataType: datetime 25 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c120834_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C120834 4 | ncitCode: C120834 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C120834 6 | parentConceptId: C25337 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Late Fetal Deaths 10 | synonyms: 11 | - FETLDTHN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of fetal deaths (in which the fetus is greater than or equal to 20 weeks gestational age) experienced by a female subject. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c120835_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C120835 4 | ncitCode: C120835 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C120835 6 | parentConceptId: C106550 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Induced Abortions 10 | synonyms: 11 | - INABORTN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of induced abortions experienced by a female subject. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c120836_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C120836 4 | ncitCode: C120836 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C120836 6 | parentConceptId: C106551 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Previous Pregnancies 10 | synonyms: 11 | - PRVPREGN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of pregnancy events experienced by the female subject prior to the current pregnancy. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c120837_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C120837 4 | ncitCode: C120837 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C120837 6 | parentConceptId: C106550 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Spontaneous Abortions 10 | synonyms: 11 | - SPABORTN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of spontaneous abortions (in which the fetus is less than 20 weeks gestational age) experienced by a female subject. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c122187_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C122187 4 | ncitCode: C122187 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C122187 6 | parentConceptId: C93491 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Congenital Abnormality Indicator 12 | synonyms: 13 | - CABNIND 14 | - Abnormal Indicator 15 | resultScales: 16 | - Ordinal 17 | definition: Specifies whether any abnormality was present at birth or during the neonatal period. 18 | dataElementConcepts: 19 | - conceptId: C70856 20 | ncitCode: C70856 21 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 22 | shortName: Observation Result 23 | dataType: string 24 | exampleSet: 25 | - "N" 26 | - "Y" 27 | - "U" 28 | - conceptId: C82515 29 | ncitCode: C82515 30 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 31 | shortName: Collection Date Time 32 | dataType: datetime 33 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c122189_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C122189 4 | ncitCode: C122189 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C122189 6 | parentConceptId: C25337 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Early Term Births 10 | synonyms: 11 | - ERLYTRMN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of birth events at which the gestational age of the neonate is 37 weeks and 0 days through 38 weeks and 6 days. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c122190_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C122190 4 | ncitCode: C122190 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C122190 6 | parentConceptId: C19332 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Full Term Births 10 | synonyms: 11 | - FULLTRMN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of birth events at which the gestational age of the neonate is 39 weeks and 0 days through 40 weeks and 6 days. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c122191_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C122191 4 | ncitCode: C122191 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C122191 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Miscarriage Indicator 12 | synonyms: 13 | - MSCRGIND 14 | resultScales: 15 | - Ordinal 16 | definition: Specifies whether any pregnancies resulted in miscarriages. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c122192_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C122192 4 | ncitCode: C122192 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C122192 6 | parentConceptId: C139264 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Pregnancy Confirmed Indicator 12 | synonyms: 13 | - PCONFIND 14 | resultScales: 15 | - Ordinal 16 | definition: Specifies whether the subject's pregnancy has been confirmed. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c122193_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C122193 4 | ncitCode: C122193 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C122193 6 | parentConceptId: C19332 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Premature Births 10 | synonyms: 11 | - PREMBTHN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of birth events at which the gestational age of the neonate is less than 37 weeks and 0 days. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c122194_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C122194 4 | ncitCode: C122194 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C122194 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Stillbirth Indicator 12 | synonyms: 13 | - STILBIND 14 | resultScales: 15 | - Ordinal 16 | definition: Specifies whether any pregnancies resulted in stillbirths. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c125009_sr.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C125009 4 | ncitCode: C125009 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C125009 6 | categories: 7 | - Clinical Interpretation 8 | shortName: Clinical Interpretation 9 | definition: The determination of the meaning of a clinical result. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c127787_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C127787 4 | ncitCode: C127787 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C127787 6 | categories: 7 | - Number 8 | shortName: Total Number 9 | definition: The determination of the amount of total number of entities. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c139264_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C139264 4 | ncitCode: C139264 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C139264 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Pregnancy Indicator 12 | synonyms: 13 | - PREGIND 14 | - Pregnant Indicator 15 | resultScales: 16 | - Ordinal 17 | definition: An indication as to whether the individual is pregnant. 18 | dataElementConcepts: 19 | - conceptId: C70856 20 | ncitCode: C70856 21 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 22 | shortName: Observation Result 23 | dataType: string 24 | exampleSet: 25 | - "N" 26 | - "Y" 27 | - "U" 28 | - conceptId: C82515 29 | ncitCode: C82515 30 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 31 | shortName: Collection Date Time 32 | dataType: datetime 33 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c139265_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C139265 4 | ncitCode: C139265 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C139265 6 | parentConceptId: C178141 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Full Term Live Births 10 | synonyms: 11 | - BRTHFTN 12 | - Number Full Term Live Births 13 | resultScales: 14 | - Quantitative 15 | definition: A measurement of the total number of live birth events at which the gestational age of the neonate is 39 weeks and 0 days through 40 weeks and 6 days. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: integer 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c139266_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C139266 4 | ncitCode: C139266 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C139266 6 | parentConceptId: C178141 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Premature Live Births 10 | synonyms: 11 | - BRTHPRN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of live birth events at which the gestational age of the neonate is less than 37 weeks and 0 days. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c15260_sr.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C15260 4 | ncitCode: C15260 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C15260 6 | categories: 7 | - Immunology Tests 8 | - Immunodiagnostic Procedure 9 | shortName: Immunodiagnostic Procedure 10 | definition: Procedures that use immunological methods to diagnose diseases, monitor health, and guide treatment decisions 11 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c154879_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C154879 4 | ncitCode: C154879 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C154879 6 | parentConceptId: C93491 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Skene's Gland Abnormality Indicator 12 | synonyms: 13 | - SKGLAIND 14 | resultScales: 15 | - Ordinal 16 | definition: An indication as to whether the Skene's gland is abnormal. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c154880_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C154880 4 | ncitCode: C154880 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C154880 6 | parentConceptId: C181043 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Bartholin's Gland Abnormality Indicator 12 | synonyms: 13 | - BTHGLIND 14 | - Abnormal Indicator 15 | resultScales: 16 | - Ordinal 17 | definition: An indication as to whether the Bartholin's gland is abnormal. 18 | dataElementConcepts: 19 | - conceptId: C70856 20 | ncitCode: C70856 21 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 22 | shortName: Observation Result 23 | dataType: string 24 | exampleSet: 25 | - "N" 26 | - "Y" 27 | - "U" 28 | - conceptId: C82515 29 | ncitCode: C82515 30 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 31 | shortName: Collection Date Time 32 | dataType: datetime 33 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c156585_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C156585 4 | ncitCode: C156585 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C156585 6 | parentConceptId: C117720 7 | categories: 8 | - Reproductive Findings 9 | shortName: Menses Flow Rate Description 10 | synonyms: 11 | - MENFRD 12 | resultScales: 13 | - Narrative 14 | definition: A subjective description of the menstrual flow rate during a menstrual cycle. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: string 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c156587_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C156587 4 | ncitCode: C156587 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C156587 6 | parentConceptId: C117720 7 | categories: 8 | - Reproductive Findings 9 | shortName: Menstrual Cycle Regularity 10 | synonyms: 11 | - MENREG 12 | resultScales: 13 | - Narrative 14 | definition: A description of how an individual's menstrual cycle conforms to a consistent temporal pattern. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: string 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c156588_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C156588 4 | ncitCode: C156588 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C156588 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Induced Abortion Indicator 12 | synonyms: 13 | - INABOIND 14 | resultScales: 15 | - Ordinal 16 | definition: An indication as to whether the female subject has had an induced abortion procedure. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c156589_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C156589 4 | ncitCode: C156589 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C156589 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Live Birth Indicator 12 | synonyms: 13 | - BRTLVIND 14 | resultScales: 15 | - Ordinal 16 | definition: "An indication as to whether the subject has delivered live-born offspring." 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c158275_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C158275 4 | ncitCode: C158275 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C158275 6 | parentConceptId: C25337 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Births 10 | synonyms: 11 | - BRTHN 12 | resultScales: 13 | - Quantitative 14 | definition: A measurement of the total number of birth events experienced by a female. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c158276_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C158276 4 | ncitCode: C158276 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C158276 6 | parentConceptId: C68616 7 | categories: 8 | - Reproductive Findings 9 | - Start Date 10 | shortName: Estimated Next Menstrual Period Start Date 11 | synonyms: 12 | - ENMPSDTC 13 | - Est Next Menstrual Period Start Date 14 | resultScales: 15 | - Temporal 16 | definition: The approximate date of the first day of the next menstrual cycle. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: datetime 23 | - conceptId: C82515 24 | ncitCode: C82515 25 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 26 | shortName: Collection Date Time 27 | dataType: datetime 28 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c163558_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C163558 4 | ncitCode: C163558 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C163558 6 | categories: 7 | - Reproductive Findings 8 | - End Date 9 | shortName: Pregnancy End Date 10 | synonyms: 11 | - PRGENDTC 12 | - Date Pregnancy Ended 13 | resultScales: 14 | - Temporal 15 | definition: The date on which the pregnancy ended. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: datetime 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c176359_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C176359 4 | ncitCode: C176359 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C176359 6 | categories: 7 | - Reproductive Findings 8 | shortName: Vaginal Bleeding and/or Spotting Frequency Description 9 | synonyms: 10 | - VBSFRQD 11 | - Vaginal Bleeding/Spotting Freq Desc 12 | - Vaginal Bleeding/Spotting Frequency Description 13 | resultScales: 14 | - Narrative 15 | definition: A description of the frequency at which vaginal bleeding and/or spotting has occurred. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: string 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c176361_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C176361 4 | ncitCode: C176361 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C176361 6 | parentConceptId: C92720 7 | categories: 8 | - Reproductive Findings 9 | shortName: Term Pregnancy Category 10 | synonyms: 11 | - TRMPGCAT 12 | resultScales: 13 | - Nominal 14 | definition: A classification of the gestation duration of the pregnancy at the time of infant birth. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: string 21 | exampleSet: 22 | - "Early Term" 23 | - "Full Term" 24 | - "Late Term" 25 | - "Postterm" 26 | - conceptId: C82515 27 | ncitCode: C82515 28 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 29 | shortName: Collection Date Time 30 | dataType: datetime 31 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c178050_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C178050 4 | ncitCode: C178050 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C178050 6 | categories: 7 | - Reproductive Findings 8 | shortName: Actual Date of Delivery 9 | synonyms: 10 | - ADLVRDTC 11 | resultScales: 12 | - Temporal 13 | definition: The date on which the delivery event occurred. 14 | dataElementConcepts: 15 | - conceptId: C70856 16 | ncitCode: C70856 17 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 18 | shortName: Observation Result 19 | dataType: datetime 20 | - conceptId: C82515 21 | ncitCode: C82515 22 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 23 | shortName: Collection Date Time 24 | dataType: datetime 25 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c178141_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C178141 4 | ncitCode: C178141 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C178141 6 | parentConceptId: C19332 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Live Births 10 | synonyms: 11 | - BRTHLVN 12 | - Live Birth Count 13 | resultScales: 14 | - Quantitative 15 | definition: "A measurement of the total number of live-born offspring a female has delivered." 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: integer 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c181524_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C181524 4 | ncitCode: C181524 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C181524 6 | categories: 7 | - Reproductive Findings 8 | shortName: Date of Last Sexual Intercourse 9 | synonyms: 10 | - MRSXIDTC 11 | - Date of Most Recent Sexual Intercourse 12 | resultScales: 13 | - Temporal 14 | definition: The date on which the most recent sexual intercourse occurred. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: datetime 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c181525_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C181525 4 | ncitCode: C181525 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C181525 6 | parentConceptId: C127787 7 | categories: 8 | - Reproductive Findings 9 | shortName: Total Number of Sexual Partners 10 | synonyms: 11 | - TSXPARTN 12 | resultScales: 13 | - Quantitative 14 | definition: The total count of all sexual partners. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c181527_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C181527 4 | ncitCode: C181527 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C181527 6 | categories: 7 | - Reproductive Findings 8 | shortName: Condom Use Frequency 9 | synonyms: 10 | - CNDUFRQD 11 | - Condom Use Frequency Desc 12 | - Condom Use Frequency Description 13 | resultScales: 14 | - Narrative 15 | definition: The reported frequency of condom use. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: string 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c181528_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C181528 4 | ncitCode: C181528 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C181528 6 | parentConceptId: C25337 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Continuous Days of Menstrual Bleeding and/or Spotting 10 | synonyms: 11 | - BLDSPNUM 12 | - Number of Continuous Days of Bleed/Spot 13 | resultScales: 14 | - Quantitative 15 | definition: The number of days one has experienced continuous menstrual bleeding and/or spotting. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: integer 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c184708_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C184708 4 | ncitCode: C184708 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C184708 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Has Menstrual Periods Indicator 12 | synonyms: 13 | - HMPIND 14 | resultScales: 15 | - Ordinal 16 | definition: An indication as to whether the subject experiences menstrual cycles. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c186213_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C186213 4 | ncitCode: C186213 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C186213 6 | parentConceptId: C139264 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Pregnancy Suspected Indicator 12 | synonyms: 13 | - PSUSPIND 14 | resultScales: 15 | - Ordinal 16 | definition: An indication that the subject is believed likely to be pregnant. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c189353_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C189353 4 | ncitCode: C189353 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C189353 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Irregular Menstrual Periods Indicator 12 | synonyms: 13 | - IRRMPIND 14 | resultScales: 15 | - Ordinal 16 | definition: An indication as to whether the individual has experienced irregular menstrual periods. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c189355_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C189355 4 | ncitCode: C189355 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C189355 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Individual Surgically Sterile Indicator 12 | synonyms: 13 | - SRGSTIND 14 | - Surgically Sterile Indicator 15 | resultScales: 16 | - Ordinal 17 | definition: An indication as to whether the individual has been surgically sterilized. 18 | dataElementConcepts: 19 | - conceptId: C70856 20 | ncitCode: C70856 21 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 22 | shortName: Observation Result 23 | dataType: string 24 | exampleSet: 25 | - "N" 26 | - "Y" 27 | - "U" 28 | - conceptId: C82515 29 | ncitCode: C82515 30 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 31 | shortName: Collection Date Time 32 | dataType: datetime 33 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c189356_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C189356 4 | ncitCode: C189356 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C189356 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Infertility Indicator 12 | synonyms: 13 | - INFRTIND 14 | resultScales: 15 | - Ordinal 16 | definition: An indication as to whether the individual has experienced infertility. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c189358_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C189358 4 | ncitCode: C189358 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C189358 6 | parentConceptId: C25337 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Cesarean Sections 10 | synonyms: 11 | - CSRSCTN 12 | - "Number of C-Sections" 13 | resultScales: 14 | - Quantitative 15 | definition: The total number of cesarean section delivery events experienced by the individual. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: integer 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c189359_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C189359 4 | ncitCode: C189359 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C189359 6 | parentConceptId: C25337 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Vaginal Deliveries 10 | synonyms: 11 | - VAGDLVN 12 | resultScales: 13 | - Quantitative 14 | definition: The total number of vaginal delivery events experienced by the individual. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c189363_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C189363 4 | ncitCode: C189363 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C189363 6 | parentConceptId: C68616 7 | categories: 8 | - Reproductive Findings 9 | - Start Date 10 | shortName: Breastfeeding Start Date 11 | synonyms: 12 | - BRFSTDTC 13 | resultScales: 14 | - Temporal 15 | definition: The date on which breastfeeding started. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: datetime 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c189364_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C189364 4 | ncitCode: C189364 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C189364 6 | parentConceptId: C68617 7 | categories: 8 | - Reproductive Findings 9 | - End Date 10 | shortName: Breastfeeding End Date 11 | synonyms: 12 | - BRFENDTC 13 | resultScales: 14 | - Temporal 15 | definition: The date on which breastfeeding ended. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: datetime 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c19332_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C19332 4 | ncitCode: C19332 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C19332 6 | categories: 7 | - Personal Individual Attribute 8 | shortName: Personal Attribute 9 | synonyms: 10 | - Subject Characteristics 11 | definition: The distinguishing qualities or prominent aspects of an individual person. 12 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c198357_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C198357 4 | ncitCode: C198357 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C198357 6 | parentConceptId: C68616 7 | categories: 8 | - Reproductive Findings 9 | - Start Date 10 | shortName: First Menstrual Period Start Date 11 | synonyms: 12 | - FMPSTDTC 13 | resultScales: 14 | - Temporal 15 | definition: The date of the first day of the first menstrual cycle. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: datetime 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c198358_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C198358 4 | ncitCode: C198358 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C198358 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: "Post-Partum Indicator" 12 | synonyms: 13 | - PPRTIND 14 | resultScales: 15 | - Ordinal 16 | definition: An indication as to whether the subject is in the stages of recovery post pregnancy and birth event. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c201474_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C201474 4 | ncitCode: C201474 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C201474 6 | parentConceptId: C181525 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of New Male Sexual Partners 10 | synonyms: 11 | - SXPRTNMN 12 | resultScales: 13 | - Quantitative 14 | definition: The number of new male sexual partners within a specified time interval. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c201475_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C201475 4 | ncitCode: C201475 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C201475 6 | parentConceptId: C181525 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of New Female Sexual Partners 10 | synonyms: 11 | - SXPRTNFN 12 | resultScales: 13 | - Quantitative 14 | definition: The number of new female sexual partners within a specified time interval. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c201476_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C201476 4 | ncitCode: C201476 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C201476 6 | parentConceptId: C181525 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of New Oral Sexual Partners 10 | synonyms: 11 | - SXPRTNON 12 | resultScales: 13 | - Quantitative 14 | definition: The number of new individuals with whom one has engaged in oral sex within a specified time interval. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: integer 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c201477_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C201477 4 | ncitCode: C201477 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C201477 6 | parentConceptId: C181525 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Male Sexual Partners 10 | synonyms: 11 | - SXPRTMN 12 | - Total Number of Male Sexual Partners 13 | resultScales: 14 | - Quantitative 15 | definition: The number of males with whom one has engaged in sexual activity within a specified time interval. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: integer 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c201478_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C201478 4 | ncitCode: C201478 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C201478 6 | parentConceptId: C181525 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Female Sexual Partners 10 | synonyms: 11 | - SXPRTFN 12 | - Total Number of Female Sexual Partners 13 | resultScales: 14 | - Quantitative 15 | definition: The number of females with whom one has engaged in sexual activity within a specified time interval. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: integer 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c201479_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C201479 4 | ncitCode: C201479 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C201479 6 | parentConceptId: C181525 7 | categories: 8 | - Reproductive Findings 9 | shortName: Number of Oral Sexual Partners 10 | synonyms: 11 | - SXPRTON 12 | - Total Number of Oral Sexual Partners 13 | resultScales: 14 | - Quantitative 15 | definition: The number of individuals with whom one has engaged in oral sexual activity within a specified time interval. 16 | dataElementConcepts: 17 | - conceptId: C70856 18 | ncitCode: C70856 19 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 20 | shortName: Observation Result 21 | dataType: integer 22 | - conceptId: C82515 23 | ncitCode: C82515 24 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 25 | shortName: Collection Date Time 26 | dataType: datetime 27 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c204694_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C204694 4 | ncitCode: C204694 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C204694 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Menarche Indicator 12 | synonyms: 13 | - MENARIND 14 | resultScales: 15 | - Ordinal 16 | definition: An indication as to whether the individual's first menstruation event has occurred. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c204695_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C204695 4 | ncitCode: C204695 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C204695 6 | parentConceptId: C25180 7 | categories: 8 | - Reproductive Findings 9 | - Clinical Findings Indicator 10 | - Indicator 11 | shortName: Actively Menstruating Indicator 12 | synonyms: 13 | - AMENSIND 14 | resultScales: 15 | - Ordinal 16 | definition: An indication as to whether the subject is menstruating at the time the question is asked. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c25330_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C25330 4 | ncitCode: C25330 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C25330 6 | categories: 7 | - Temporal Qualifier 8 | shortName: Duration 9 | definition: The period of time during which something continues. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c25337_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C25337 4 | ncitCode: C25337 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C25337 6 | categories: 7 | - Property or Attribute 8 | shortName: Number 9 | definition: A numeral or string of numerals expressing value, quantity, or identification. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c48309_sr.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C48309 4 | ncitCode: C48309 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C48309 6 | categories: 7 | - Grade 8 | shortName: Grade 9 | definition: A position on a scale of intensity or amount or quality. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c49236_pr.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C49236 4 | ncitCode: C49236 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C49236 6 | categories: 7 | - Oncology Standards 8 | - Therapeutic Procedure 9 | - Radiation Therapy 10 | shortName: Therapeutic Procedure 11 | definition: Medical care intended to treat or cure a condition or lessen its symptoms. This includes the administration of drugs, surgical procedures, physical or psychotherapy, or the use of therapeutic devices. 12 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c62085_eg.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C62085 4 | ncitCode: C62085 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C62085 6 | categories: 7 | - Electrocardiogram Findings 8 | shortName: ECG Measurement 9 | synonyms: 10 | - Electrocardiogram Measurement 11 | - EKG Measurement 12 | definition: Measurements or calculations on measurements obtained from electrocardiographic tracings. 13 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c68616_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C68616 4 | ncitCode: C68616 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C68616 6 | categories: 7 | - Date 8 | shortName: Start Date 9 | synonyms: 10 | - Starting Date 11 | resultScales: 12 | - Temporal 13 | definition: The calendar date on which something is to start or did start. 14 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c68617_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C68617 4 | ncitCode: C68617 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C68617 6 | categories: 7 | - Date 8 | shortName: End Date 9 | synonyms: 10 | - Stopping Date 11 | resultScales: 12 | - Temporal 13 | definition: The calendar date on which something is to terminate or did terminate. 14 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c69217_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C69217 4 | ncitCode: C69217 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C69217 6 | categories: 7 | - Age 8 | shortName: Age Started 9 | synonyms: 10 | - Age at Onset 11 | resultScales: 12 | - Quantitative 13 | definition: The age of a person at the start of a specific event. 14 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c71460_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C71460 4 | ncitCode: C71460 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C71460 6 | categories: 7 | - Means 8 | shortName: Method 9 | definition: A means, manner of procedure, or systematic course of actions that have to be performed in order to accomplish a particular goal. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c73435_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C73435 4 | ncitCode: C73435 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C73435 6 | parentConceptId: C19332 7 | categories: 8 | - Reproductive Findings 9 | shortName: Gravida 10 | synonyms: 11 | - GRAVIND 12 | - PREGNANT 13 | - Gravida Indicator 14 | resultScales: 15 | - Ordinal 16 | definition: A woman who currently is pregnant or has been in the past, irrespective of the pregnancy outcome. 17 | dataElementConcepts: 18 | - conceptId: C70856 19 | ncitCode: C70856 20 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 21 | shortName: Observation Result 22 | dataType: string 23 | exampleSet: 24 | - "N" 25 | - "Y" 26 | - "U" 27 | - conceptId: C82515 28 | ncitCode: C82515 29 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 30 | shortName: Collection Date Time 31 | dataType: datetime 32 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c81257_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C81257 4 | ncitCode: C81257 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C81257 6 | parentConceptId: C117720 7 | categories: 8 | - Reproductive Findings 9 | - Start Date 10 | shortName: Last Menstrual Period 11 | synonyms: 12 | - LMPSTDTC 13 | - LMP 14 | - Last Menstrual Period Start Date 15 | resultScales: 16 | - Temporal 17 | definition: The date of the first day of the most recent menstrual cycle. 18 | dataElementConcepts: 19 | - conceptId: C70856 20 | ncitCode: C70856 21 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 22 | shortName: Observation Result 23 | dataType: datetime 24 | - conceptId: C82515 25 | ncitCode: C82515 26 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 27 | shortName: Collection Date Time 28 | dataType: datetime 29 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c82572_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C82572 4 | ncitCode: C82572 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82572 6 | categories: 7 | - Time 8 | shortName: Elapsed Time 9 | definition: The interval between two reference points in time. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c89340_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C89340 4 | ncitCode: C89340 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C89340 6 | categories: 7 | - Reproductive Findings 8 | - Intervention or Procedure 9 | shortName: Obstetric Procedure 10 | definition: Any pregnancy or childbirth related procedure associated with a mother during her reproductive years. 11 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c90491_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C90491 4 | ncitCode: C90491 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C90491 6 | parentConceptId: C92720 7 | categories: 8 | - Reproductive Findings 9 | shortName: Pregnancy Outcome 10 | synonyms: 11 | - PRGOUT 12 | resultScales: 13 | - Narrative 14 | definition: Findings observed at the end of a pregnancy. 15 | dataElementConcepts: 16 | - conceptId: C70856 17 | ncitCode: C70856 18 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C70856 19 | shortName: Observation Result 20 | dataType: string 21 | - conceptId: C82515 22 | ncitCode: C82515 23 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82515 24 | shortName: Collection Date Time 25 | dataType: datetime 26 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c92720_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C92720 4 | ncitCode: C92720 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C92720 6 | categories: 7 | - Reproductive Findings 8 | shortName: Pregnancy Finding 9 | definition: Symptoms, signs, diagnostic examinations or a test results in a pregnant mother. 10 | -------------------------------------------------------------------------------- /yaml/20241217_r10/bc/bc_c93491_rp.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2024-12-17" 2 | packageType: bc 3 | conceptId: C93491 4 | ncitCode: C93491 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C93491 6 | categories: 7 | - Clinical Findings Indicator 8 | - Indicator 9 | shortName: Abnormal Indicator 10 | definition: Specifies whether an interpreted event or entity is abnormal. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c125581.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C125581 4 | ncitCode: C125581 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C125581 6 | categories: 7 | - Laboratory Tests 8 | shortName: Pathology Result 9 | synonyms: 10 | - Pathology Examination Result 11 | definition: The outcome of a pathologic examination. 12 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c15280.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C15280 4 | ncitCode: C15280 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C15280 6 | categories: 7 | - Surgeries 8 | - Procedures 9 | - Breast Surgeries 10 | - Therapeutic Procedures 11 | - Breast Cancer TAUG 12 | shortName: Breast Conservation Treatment 13 | definition: "Breast conservation treatment is defined as excision of the primary tumor and adjacent breast tissue, followed by radiation therapy. This procedure is also referred to as lumpectomy, segmental mastectomy, or partial mastectomy. (from Consensus Statements: Treatment of Early-stage Breast Cancer, 1990)" 14 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c157802.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C157802 4 | ncitCode: C157802 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C157802 6 | categories: 7 | - Surgeries 8 | - Procedures 9 | - Breast Surgeries 10 | - Therapeutic Procedures 11 | - Breast Cancer TAUG 12 | shortName: Breast Surgery 13 | definition: A surgical procedure on the breast. 14 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c17369.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C17369 4 | ncitCode: C17369 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C17369 6 | categories: 7 | - Diagnostic Imaging 8 | - Medical Imaging 9 | - Diagnostic Procedures 10 | - Procedures 11 | - Breast Cancer TAUG 12 | shortName: Imaging Procedure 13 | definition: Any technology or method that aids in the visualization of any biological process, cell, tissue or organ for use in screening, diagnosis, surgical procedures or therapy. 14 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c18194.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C18194 4 | ncitCode: C18194 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C18194 6 | categories: 7 | - Oncology Standards 8 | - Diagnostic Tests 9 | - Diagnostic Assays 10 | - Diagnostic Procedures 11 | shortName: Molecular Diagnostic Method 12 | definition: Methods for diagnosis or monitoring of disease predisposition by translation and validation of molecular discoveries in medicine into the clinical diagnostic setting. 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c190808.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C190808 4 | ncitCode: C190808 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C190808 6 | categories: 7 | - Oncology Standards 8 | - Breast Cancer TAUG 9 | - Diagnostic Tests 10 | - Diagnostic Procedures 11 | shortName: Recurrence Risk Score 12 | definition: A score that estimates the likelihood that an individual with have a recurrence of a disease. 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c19770.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C19770 4 | ncitCode: C19770 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C19770 6 | categories: 7 | - Laboratory Tests 8 | - Laboratory Procedures 9 | shortName: Molecular Analysis 10 | synonyms: 11 | - Molecular Test 12 | - Molecular Procedure 13 | - Molecular Assay 14 | - Molecular Genetic Analysis 15 | definition: A laboratory procedure that involves the study of tissues, cells, and fluids using techniques to analyze biologically active molecules, including nucleic acids, proteins, lipids and carbohydrates, for the identification of processes, characteristics and abnormalities at the molecular level. 16 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c28042.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C28042 4 | ncitCode: C28042 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C28042 6 | categories: 7 | - Oncology Standards 8 | - Tumor Results 9 | shortName: Proliferative Index 10 | definition: The percentage of cells in a biological specimen that are dividing. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c35867.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C35867 4 | ncitCode: C35867 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C35867 6 | categories: 7 | - Histopathology Findings 8 | - Microscopic Findings 9 | shortName: Morphologic Finding 10 | definition: A light microscopic finding that describes the cellular characteristics and architectural patterns of cell populations in a tissue sample. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c36285.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C36285 4 | ncitCode: C36285 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C36285 6 | categories: 7 | - Endocrine Tests 8 | - Hormone Measurements 9 | shortName: Endocrine System Finding 10 | definition: Symptoms, physical examination results, and/or laboratory test results related to the endocrine system. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c4872.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C4872 4 | ncitCode: C4872 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C4872 6 | categories: 7 | - Oncology Standards 8 | - Breast Cancer TAUG 9 | shortName: Breast Carcinoma 10 | synonyms: 11 | - Cancer of the Breast 12 | definition: "A carcinoma arising from the breast, most commonly the terminal ductal-lobular unit. It is the most common malignant tumor in females. Risk factors include country of birth, family history, menstrual and reproductive history, fibrocystic disease and epithelial hyperplasia, exogenous estrogens, contraceptive agents, and ionizing radiation. The vast majority of breast carcinomas are adenocarcinomas (ductal or lobular). Breast carcinoma spreads by direct invasion, by the lymphatic route, and by the blood vessel route. The most common site of lymph node involvement is the axilla." 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c48938.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C48938 4 | ncitCode: C48938 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C48938 6 | categories: 7 | - Laboratory Tests 8 | - Clinical Pathology Procedures 9 | shortName: Cell Count 10 | definition: A procedure to determine the number of cells in a sample. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c55073.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C55073 4 | ncitCode: C55073 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C55073 6 | parentConceptId: C38155 7 | categories: 8 | - Oncology Standards 9 | - Recurrent Disease 10 | - Disease Response 11 | shortName: Recurrent Disease, Distant Site 12 | synonyms: 13 | - Distant Disease 14 | - Distant Recurrence 15 | - Relapse Distant Site 16 | definition: Recurrence of symptoms of a disease, at a site different and away from the original site. 17 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_bc_c94299.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C94299 4 | ncitCode: C94299 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C94299 6 | categories: 7 | - Laboratory Tests 8 | shortName: Receptor Status 9 | definition: Refers to the presence or absence of specific receptor molecules on the surface of a cells in a specimen. 10 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_gf_c17248.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C17248 4 | ncitCode: C17248 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C17248 6 | categories: 7 | - Genomics Findings 8 | - Genetic Variation 9 | shortName: Genetic Variation 10 | synonyms: 11 | - Genetic Diversity 12 | - Sequence Variant 13 | - Sequence Variation 14 | - Variant Classification 15 | definition: Genetic Variation consists of deviation(s) in the nucleotide sequence of the genetic material of an individual from that typical of the group to which the individual belongs, or deviation(s) in the nucleotide sequence of the genetic material of offspring from that of its parents. 16 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_gf_c18302.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C18302 4 | ncitCode: C18302 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C18302 6 | categories: 7 | - Genomics Findings 8 | - Genetic Variation Analysis 9 | - Oncology Standards 10 | - Breast Cancer TAUG 11 | - Genetic Testing 12 | - Gene Expression Analysis 13 | - Molecular Analysis 14 | - Laboratory Procedures 15 | shortName: Genetic Variation Analysis 16 | synonyms: 17 | - Mutation Analysis 18 | definition: The identification of genetic variation in a biological sample. 19 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_gf_c28614.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C28614 4 | ncitCode: C28614 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C28614 6 | parentConceptId: C21049 7 | categories: 8 | - Genomic Findings 9 | - Gene Expression Process 10 | - Transcription Process 11 | shortName: Transcription Process 12 | definition: A Transcription Process is any cellular event or activity directly involved in the synthesis a nascent RNA transcript. 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_gf_c63331.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C63331 4 | ncitCode: C63331 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C63331 6 | categories: 7 | - Genomic Findings 8 | - Molecular Analysis 9 | - Microsatellite Instability Analysis 10 | shortName: Microsatellite Instability Analysis 11 | definition: A laboratory procedure to detect microsatellite instability. 12 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_gf_c63479.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C63479 4 | ncitCode: C63479 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C63479 6 | categories: 7 | - Genomic Findings 8 | - Gene Expression Analysis 9 | shortName: Gene Expression Analysis 10 | definition: Procedures that examine how genes are transcribed to produce functional products. These analyses can include the study of factors that influence gene transcription or the determination of the presence, absence or level of expression for one more genes. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c147128.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C147128 4 | ncitCode: C147128 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C147128 6 | categories: 7 | - Laboratory Tests 8 | - Chemistry Tests 9 | - Hormone Measurements 10 | - Choriogonadotropin Measurements 11 | - HCG Measurements 12 | shortName: Choriogonadotropin Measurement 13 | synonyms: 14 | - Choriogonadotropin 15 | - Human Chorionic Gonadotropin 16 | - HCGND 17 | definition: The determination of the amount of choriogonadotropin present in a sample. 18 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c147905.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C147905 4 | ncitCode: C147905 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C147905 6 | parentConceptId: C17241 7 | categories: 8 | - Laboratory Tests 9 | shortName: Urine Dipstick Test 10 | synonyms: 11 | - Urine Test Strip 12 | definition: "Use of a test strip designed to detect one or more specific substances in urine. Results are indicated by a color change and may be qualitative or semi-quantitative." 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c154812.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C154812 4 | ncitCode: C154812 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C154812 6 | parentConceptId: C49188 7 | categories: 8 | - Laboratory Tests 9 | - Microbiology Tests 10 | shortName: Gram Negative Bacteria Measurement 11 | definition: "The determination of the gram-negative bacteria present in a sample." 12 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c158424.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C158424 4 | ncitCode: C158424 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C158424 6 | categories: 7 | - Laboratory Tests 8 | - Physical Property 9 | shortName: Physical Property 10 | definition: Any of the characteristics that define the nature of matter or forces that act upon it. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c16723.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C16723 4 | ncitCode: C16723 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C16723 6 | categories: 7 | - Laboratory Tests 8 | shortName: Immunology Test 9 | definition: Laboratory test involving interaction of antigens with specific antibodies. 10 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c171456.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C171456 4 | ncitCode: C171456 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C171456 6 | parentConceptId: C49188 7 | categories: 8 | - Laboratory Tests 9 | - Microbiology Tests 10 | - Virology Tests 11 | - "COVID-19 Tests" 12 | - "SARS-CoV-2 Tests" 13 | shortName: Coronaviridae Measurement 14 | definition: The determination of the amount of coronaviridae in a sample. 15 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c17241.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C17241 4 | ncitCode: C17241 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C17241 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | shortName: Urinalysis 10 | synonyms: 11 | - Urine Test 12 | - UA 13 | definition: "Laboratory analysis of urine, commonly used to aid in the diagnosis of disease or to detect the presence of a specific substance. It involves examination of the urine by physical or chemical means as well as microscopic examination that helps to screen for urinary tract infections, renal disease, and diseases of other organs, that result in abnormal metabolites (break-down products) appearing in the urine." 14 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c210010.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C210010 4 | ncitCode: C210010 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C210010 6 | categories: 7 | - Laboratory Tests 8 | - Immunology Tests 9 | shortName: Antibody Measurement 10 | definition: The determination of the amount of antibodies present in a sample. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c28133.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C28133 4 | ncitCode: C28133 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C28133 6 | parentConceptId: C49286 7 | categories: 8 | - Laboratory Tests 9 | shortName: Blood Cell Count 10 | synonyms: 11 | - Complete Blood Count 12 | - CBC 13 | - Full Blood Count 14 | - FBC 15 | definition: The determination of the number of red blood cells, white blood cells, and platelets in a biospecimen. 16 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c35553.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C35553 4 | ncitCode: C35553 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C35553 6 | categories: 7 | - Laboratory Tests 8 | - Abnormal Laboratory Test Results 9 | shortName: Abnormal Blood Chemistry and Hematology Test Result 10 | definition: A laboratory test result that indicates the presence of abnormal blood chemistry and/or hematology values. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c36292.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C36292 4 | ncitCode: C36292 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C36292 6 | categories: 7 | - Laboratory Test Result 8 | shortName: Laboratory Test Result 9 | definition: The outcome of a laboratory test. 10 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c45398.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C45398 4 | ncitCode: C45398 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C45398 6 | categories: 7 | - Laboratory Tests 8 | - Nitroso Carcinogens 9 | shortName: Carcinogenic Nitrosamine 10 | definition: "An organic N-nitroso compound with possible carcinogenic activity characterized by the group -NNO or -NHNO in its structure, formed by combining nitrates with amines. These compounds are found in various foods and many are carcinogenic or are suspected carcinogens. Cured meats can contain nitrosamines because meats contain amines and can react during cooking with sodium nitrite that is added as a preservative. (NCI05)" 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c49188.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C49188 4 | ncitCode: C49188 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C49188 6 | categories: 7 | - Microbiology Tests 8 | shortName: Microbiology Test 9 | synonyms: 10 | - Laboratory Testing 11 | - Microbiology 12 | definition: A laboratory procedure to detect microorganisms in a sample. 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c49237.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C49237 4 | ncitCode: C49237 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C49237 6 | categories: 7 | - Laboratory Tests 8 | shortName: Chemistry Test 9 | synonyms: 10 | - Chemistry Measurement 11 | - Chemistry Procedure 12 | - Chemistry Technique 13 | definition: A laboratory test designed for the quantification of an organic or inorganic chemical within a biological specimen. 14 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c49286.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C49286 4 | ncitCode: C49286 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C49286 6 | categories: 7 | - Laboratory Tests 8 | shortName: Hematology Test 9 | synonyms: 10 | - Blood Test 11 | - Hematology Procedure 12 | definition: A laboratory test to measure hematopoietic components and investigate hematologic disorders in a blood sample. 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c60819.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C60819 4 | ncitCode: C60819 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C60819 6 | categories: 7 | - Laboratory Tests 8 | - Mixed Category Laboratory Procedure 9 | - Assay 10 | shortName: Assay 11 | definition: A qualitative or quantitative analysis performed to determine the amount of a particular constituent in a sample or the biological or pharmacological properties of a drug. 12 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c64430.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C64430 4 | ncitCode: C64430 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C64430 6 | categories: 7 | - Laboratory Tests 8 | - Chemistry Tests 9 | shortName: Protein or Enzyme Type Measurement 10 | definition: A term that refers to a chemistry test measuring a specific protein or enzyme in the peripheral blood or body fluid. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c67208.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C67208 4 | ncitCode: C67208 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C67208 6 | parentConceptId: C28133 7 | categories: 8 | - Laboratory Tests 9 | - Hematology Tests 10 | - Blood Cell Counts 11 | - Blood Cell Count Ratio Measurements 12 | shortName: Blood Cell Count Ratio Measurement 13 | definition: The determination of the ratio of one blood cell component to another in a blood sample. The measurement may be expressed as either a ratio or a percentage. 14 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c74675.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C74675 4 | ncitCode: C74675 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C74675 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | shortName: Drug Class Measurement 11 | definition: The determination of the levels of all members of a specific drug class present in a sample. 12 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c74742.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C74742 4 | ncitCode: C74742 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C74742 6 | categories: 7 | - Laboratory Tests 8 | - Chemistry Tests 9 | - Endocrine Tests 10 | shortName: Hormone Measurement 11 | definition: The determination of the amount of hormone present in a sample. 12 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c74803.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C74803 4 | ncitCode: C74803 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C74803 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | shortName: Vitamin Measurement 11 | definition: The determination of the type and amount of vitamins in a sample. 12 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c74804.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C74804 4 | ncitCode: C74804 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C74804 6 | categories: 7 | - Laboratory Tests 8 | - Chemistry Tests 9 | shortName: Cytokine Measurement 10 | definition: The determination of type and amount of cytokines in a sample. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c74946.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C74946 4 | ncitCode: C74946 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C74946 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | shortName: Electrolyte Measurement 10 | resultScales: 11 | - Quantitative 12 | definition: A quantitative measurement of the amount of an electrolyte present in a sample. 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c74949.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C74949 4 | ncitCode: C74949 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C74949 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | - Lipid Measurements 11 | shortName: Lipid Measurement 12 | synonyms: 13 | - LIPID 14 | - Total Lipid 15 | resultScales: 16 | - Quantitative 17 | definition: A quantitative measurement of the amount of lipids (cholesterol, lipoproteins, and triglycerides) present in a sample. 18 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c74954.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C74954 4 | ncitCode: C74954 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C74954 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | shortName: Liver Function Test 10 | resultScales: 11 | - Quantitative 12 | definition: The quantitative measurement of liver enzymes in the blood, which is useful in assessing the functional state of a patient's liver. Liver function tests include the measurement of albumin, alanine transaminase, aspartate transaminase, alkaline phosphatase, bilirubin, and gamma glutamyl transferase. 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c74957.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C74957 4 | ncitCode: C74957 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C74957 6 | categories: 7 | - Laboratory Tests 8 | - Mixed Category Laboratory Procedure 9 | shortName: Mixed Category Laboratory Procedure 10 | definition: "A laboratory procedure that is performed in more than one of these laboratory specializations: anatomic pathology, clinical pathology, or molecular pathology." 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c75342.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C75342 4 | ncitCode: C75342 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C75342 6 | parentConceptId: C74675 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | - Drug Class Measurements 11 | shortName: CNS Stimulant Drug Measurement 12 | definition: The determination of the amount of any drug that stimulates the central nervous system (CNS) present in a sample. 13 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c75385.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C75385 4 | ncitCode: C75385 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C75385 6 | parentConceptId: C74742 7 | categories: 8 | - Laboratory Tests 9 | - Gene Products 10 | shortName: Peptide Hormone Measurement 11 | definition: The determination of the amount of any peptide hormone present in a sample. 12 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_lb_c82624.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C82624 4 | ncitCode: C82624 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82624 6 | parentConceptId: C49237 7 | categories: 8 | - Laboratory Tests 9 | - Chemistry Tests 10 | - Gas Measurements 11 | shortName: Gas Measurement 12 | synonyms: 13 | - Gas 14 | definition: A measurement of the gas in a sample. 15 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_mk_c110937.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C110937 4 | ncitCode: C110937 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C110937 6 | categories: 7 | - Musculoskeletal Finding 8 | shortName: Musculoskeletal Finding 9 | definition: Symptoms, physical examination results, and/or laboratory rest results related to the muscles and bones. 10 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_mk_c112025.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C112025 4 | ncitCode: C112025 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C112025 6 | categories: 7 | - Musculoskeletal Finding 8 | - Mass Measurement 9 | shortName: Mass Measurement 10 | definition: Mass Measurement. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_mk_c120401.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C120401 4 | ncitCode: C120401 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C120401 6 | categories: 7 | - Musculoskeletal Finding 8 | - "T-Score" 9 | shortName: "T-Score" 10 | definition: "A method for converting an individual score into a standard form. While similar to a z-score, t-score is used when the conversion is made without knowledge of the population standard deviation and mean." 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_mk_c19332.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C19332 4 | ncitCode: C19332 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C19332 6 | categories: 7 | - Musculoskeletal Finding 8 | - Personal Attribute 9 | shortName: Personal Attribute 10 | definition: The distinguishing qualities or prominent aspects of an individual person. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_mk_c25338.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C25338 4 | ncitCode: C25338 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C25338 6 | categories: 7 | - Musculoskeletal Finding 8 | - Score 9 | shortName: Score 10 | definition: A number or range of numeric values measuring performance, function, quality, or ability. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_mk_c68741.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C68741 4 | ncitCode: C68741 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C68741 6 | categories: 7 | - Musculoskeletal Finding 8 | - "Z-Score" 9 | shortName: "Z-Score" 10 | definition: "A method for converting an individual score into a standard form. The z-score indicates how far and in what direction an item deviates from its distribution's mean, expressed in units of standard deviation. Calculation of a z-score requires knowledge about the population's standard deviation and mean." 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_mk_c87802.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C87802 4 | ncitCode: C87802 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C87802 6 | categories: 7 | - Musculoskeletal Finding 8 | - Physical Strength 9 | shortName: Physical Strength 10 | definition: Degree of intensity or force in regard to a physical activity. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_ur_c25305.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C25305 4 | ncitCode: C25305 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C25305 6 | categories: 7 | - Medical Examination 8 | shortName: Medical Examination 9 | definition: An appraisal or evaluation of a patient's condition by a clinician that is based on a physical exam, medical history, and the patient's account of symptoms. 10 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_ur_c25337.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C25337 4 | ncitCode: C25337 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C25337 6 | categories: 7 | - Findings 8 | shortName: Number 9 | definition: A numeral or string of numerals expressing value, quantity, or identification. 10 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_ur_c82554.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C82554 4 | ncitCode: C82554 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C82554 6 | categories: 7 | - Findings 8 | - Clinical Test Result 9 | shortName: Flow Rate 10 | definition: The speed of movement of a liquid. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/bc/bc_ur_c96648.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: bc 3 | conceptId: C96648 4 | ncitCode: C96648 5 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C96648 6 | categories: 7 | - Findings 8 | - Clinical Test Result 9 | shortName: Fat Measurement 10 | definition: The determination of the amount of fat present in a sample. 11 | -------------------------------------------------------------------------------- /yaml/20250401_r11/sdtm/sdtm_ethnic.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: sdtm 3 | datasetSpecializationId: ETHNIC 4 | domain: DM 5 | shortName: Ethnicity 6 | source: DM.ETHNIC 7 | sdtmigStartVersion: "3-2" 8 | sdtmigEndVersion: "" 9 | biomedicalConceptId: C16564 10 | variables: 11 | - name: ETHNIC 12 | dataElementConceptId: C16564 13 | isNonStandard: false 14 | codelist: 15 | conceptId: C66790 16 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C66790 17 | submissionValue: ETHNIC 18 | valueList: 19 | - "HISPANIC OR LATINO" 20 | - "NOT HISPANIC OR LATINO" 21 | - "NOT REPORTED" 22 | - "UNKNOWN" 23 | role: Qualifier 24 | dataType: text 25 | length: 100 26 | mandatoryVariable: false 27 | mandatoryValue: false 28 | originType: Collected 29 | originSource: Investigator 30 | - name: DMDTC 31 | dataElementConceptId: C82515 32 | isNonStandard: false 33 | role: Timing 34 | dataType: datetime 35 | mandatoryVariable: true 36 | mandatoryValue: false 37 | -------------------------------------------------------------------------------- /yaml/20250401_r11/sdtm/sdtm_sex.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-04-01" 2 | packageType: sdtm 3 | datasetSpecializationId: SEX 4 | domain: DM 5 | shortName: Sex 6 | source: DM.SEX 7 | sdtmigStartVersion: "3-2" 8 | sdtmigEndVersion: "" 9 | biomedicalConceptId: C28421 10 | variables: 11 | - name: SEX 12 | dataElementConceptId: C28421 13 | isNonStandard: false 14 | codelist: 15 | conceptId: C66731 16 | href: https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C66731 17 | submissionValue: SEX 18 | valueList: 19 | - "F" 20 | - "INTERSEX" 21 | - "M" 22 | - "U" 23 | role: Qualifier 24 | dataType: text 25 | length: 100 26 | mandatoryVariable: true 27 | mandatoryValue: false 28 | originType: Collected 29 | originSource: Investigator 30 | - name: DMDTC 31 | dataElementConceptId: C82515 32 | isNonStandard: false 33 | role: Timing 34 | dataType: datetime 35 | mandatoryVariable: true 36 | mandatoryValue: false 37 | -------------------------------------------------------------------------------- /yaml/20251231/collection/collection_vsperf_vertical.yaml: -------------------------------------------------------------------------------- 1 | packageDate: "2025-12-31" 2 | packageType: collection 3 | collectionSpecializationId: VSPERF_VERTICAL 4 | shortName: Vital Signs Performed (Vertical) 5 | standard: CDASH IG 6 | standardStartVersion: "2-1" 7 | standardEndVersion: 8 | implementationOption: Vertical 9 | domain: VS 10 | items: 11 | - name: VSPERF 12 | variableName: VSPERF 13 | dataElementConceptId: C82525 14 | questionText: Were vital signs performed? 15 | orderNumber: 1 16 | mandatoryVariable: true 17 | dataType: text 18 | length: 3 19 | displayHidden: false 20 | sdtmTarget: 21 | sdtmAnnotation: VSSTAT when VSTESTCD = VSALL 22 | sdtmVariables: 23 | - "VSSTAT" 24 | - name: VSDAT 25 | variableName: VSDAT 26 | dataElementConceptId: C82525 27 | prompt: Date of Assessment 28 | orderNumber: 2 29 | mandatoryVariable: false 30 | dataType: date 31 | length: 10 32 | displayHidden: false 33 | sdtmTarget: 34 | sdtmAnnotation: VSDTC 35 | sdtmVariables: 36 | - "VSDTC" 37 | -------------------------------------------------------------------------------- /yaml/validate_bc.cmd: -------------------------------------------------------------------------------- 1 | @echo off 2 | cd %~dp0 3 | 4 | if /i (a%1) == (a) (REM 5 | set /p folder=Folder ^[folder^]: 6 | ) else ( 7 | set folder=%1 8 | ) 9 | 10 | if not exist "%~dp0\%folder%\bc\." ( 11 | echo Folder %~dp0%folder%\bc does not exist. 12 | goto :EOF 13 | ) 14 | 15 | 16 | call ..\venv\Scripts\activate 17 | 18 | set logfile=%~dpn0_%folder%.log 19 | echo.>%logfile% 20 | 21 | set counter=0 22 | for /F "eol=; tokens=1 delims=" %%i IN ('dir /b /s %~dp0%folder%\bc\*.yaml') do @call :ValidateFile %%i 23 | 24 | findstr /i /n /s "error" %logfile% 25 | goto:EOF 26 | 27 | :ValidateFile 28 | 29 | set /a counter=counter+1 > nul 30 | echo %counter% *** %1 31 | echo *** %1 >> %logfile% 32 | 33 | linkml-validate -C BiomedicalConcept -s ../model/cosmos_bc_model.yaml %1 >> %logfile% 2>>&1 34 | 35 | goto :EOF 36 | -------------------------------------------------------------------------------- /yaml/validate_collection.cmd: -------------------------------------------------------------------------------- 1 | @echo off 2 | cd %~dp0 3 | 4 | if /i (a%1) == (a) (REM 5 | set /p folder=Folder ^[folder^]: 6 | ) else ( 7 | set folder=%1 8 | ) 9 | 10 | if not exist "%~dp0\%folder%\collection\." ( 11 | echo Folder %~dp0%folder%\collection does not exist. 12 | goto :EOF 13 | ) 14 | 15 | 16 | call ..\venv\Scripts\activate 17 | 18 | set logfile=%~dpn0_%folder%.log 19 | echo.>%logfile% 20 | 21 | set counter=0 22 | for /F "eol=; tokens=1 delims=" %%i IN ('dir /b /s %~dp0%folder%\collection\*.yaml') do @call :ValidateFile %%i 23 | 24 | findstr /i /n /s "error" %logfile% 25 | goto:EOF 26 | 27 | :ValidateFile 28 | 29 | set /a counter=counter+1 > nul 30 | echo %counter% *** %1 31 | echo *** %1 >> %logfile% 32 | 33 | linkml-validate -C DataCollectionGroup -s ../model/cosmos_collection_bc_model.yaml %1 >> %logfile% 2>>&1 34 | 35 | goto :EOF 36 | -------------------------------------------------------------------------------- /yaml/validate_sdtm.cmd: -------------------------------------------------------------------------------- 1 | @echo off 2 | cd %~dp0 3 | 4 | if /i (a%1) == (a) (REM 5 | set /p folder=Folder ^[folder^]: 6 | ) else ( 7 | set folder=%1 8 | ) 9 | 10 | if not exist "%~dp0\%folder%\sdtm\." ( 11 | echo Folder %~dp0%folder%\sdtm does not exist. 12 | goto :EOF 13 | ) 14 | 15 | 16 | call ..\venv\Scripts\activate 17 | 18 | set logfile=%~dpn0_%folder%.log 19 | echo.>%logfile% 20 | 21 | set counter=0 22 | for /F "eol=; tokens=1 delims=" %%i IN ('dir /b /s %~dp0%folder%\sdtm\*.yaml') do @call :ValidateFile %%i 23 | 24 | findstr /i /n /s "error" %logfile% 25 | goto:EOF 26 | 27 | :ValidateFile 28 | 29 | set /a counter=counter+1 > nul 30 | echo %counter% *** %1 31 | echo *** %1 >> %logfile% 32 | 33 | linkml-validate -C SDTMGroup -s ../model/cosmos_sdtm_bc_model.yaml %1 >> %logfile% 2>>&1 34 | 35 | goto :EOF 36 | --------------------------------------------------------------------------------