├── .github └── workflows │ └── test_and_deploy.yml ├── .gitignore ├── .pre-commit-config.yaml ├── LICENSE ├── MANIFEST.in ├── README.md ├── cover.png ├── examples └── run_app.py ├── icon.png ├── pyproject.toml ├── setup.cfg ├── src └── cellcanvas │ ├── __init__.py │ ├── _app │ ├── __init__.py │ └── main_app.py │ ├── _tests │ ├── __init__.py │ └── test_widget.py │ ├── _widget.py │ ├── app.py │ ├── constants.py │ ├── data │ ├── __init__.py │ ├── data_manager.py │ └── data_set.py │ ├── geometry │ ├── __init__.py │ └── surforama.py │ ├── instance │ ├── __init__.py │ ├── _qt │ │ ├── __init__.py │ │ ├── qt_morphological_operations.py │ │ └── qt_segment_manager.py │ ├── _tests │ │ ├── __init__.py │ │ └── test_segment_manager.py │ ├── bounding_box_utils.py │ ├── fill.py │ ├── label_smoothing.py │ ├── mesh.py │ ├── paint.py │ └── segment_manager.py │ ├── napari.yaml │ ├── semantic │ ├── __init__.py │ ├── _embedding_segmentor.py │ └── segmentation_manager.py │ └── utils.py └── tox.ini 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