├── DESCRIPTION ├── NAMESPACE ├── R ├── data.R ├── likelihood.R ├── sens_analysis.R ├── sim.R └── stats.R ├── README.md ├── data ├── china_cases.rda ├── china_population.rda ├── p_hat_alpha4.0.rda ├── p_hat_alpha4.4.rda ├── p_hat_alpha5.0.rda ├── p_hat_alpha6.0.rda └── world_cases.rda ├── man ├── LogLikelihood.Rd ├── NetworkODEModel.Rd ├── bootstrap.Rd ├── import_matrix.Rd ├── quantile_ci.Rd └── summary_samples.Rd └── vignettes └── wuhan-model.Rmd /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/NAMESPACE -------------------------------------------------------------------------------- /R/data.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/R/data.R -------------------------------------------------------------------------------- /R/likelihood.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/R/likelihood.R -------------------------------------------------------------------------------- /R/sens_analysis.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/R/sens_analysis.R -------------------------------------------------------------------------------- /R/sim.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/R/sim.R -------------------------------------------------------------------------------- /R/stats.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/R/stats.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/README.md -------------------------------------------------------------------------------- /data/china_cases.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/data/china_cases.rda -------------------------------------------------------------------------------- /data/china_population.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/data/china_population.rda -------------------------------------------------------------------------------- /data/p_hat_alpha4.0.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/data/p_hat_alpha4.0.rda -------------------------------------------------------------------------------- /data/p_hat_alpha4.4.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/data/p_hat_alpha4.4.rda -------------------------------------------------------------------------------- /data/p_hat_alpha5.0.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/data/p_hat_alpha5.0.rda -------------------------------------------------------------------------------- /data/p_hat_alpha6.0.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/data/p_hat_alpha6.0.rda -------------------------------------------------------------------------------- /data/world_cases.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/data/world_cases.rda -------------------------------------------------------------------------------- /man/LogLikelihood.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/man/LogLikelihood.Rd -------------------------------------------------------------------------------- /man/NetworkODEModel.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/man/NetworkODEModel.Rd -------------------------------------------------------------------------------- /man/bootstrap.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/man/bootstrap.Rd -------------------------------------------------------------------------------- /man/import_matrix.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/man/import_matrix.Rd -------------------------------------------------------------------------------- /man/quantile_ci.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/man/quantile_ci.Rd -------------------------------------------------------------------------------- /man/summary_samples.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/man/summary_samples.Rd -------------------------------------------------------------------------------- /vignettes/wuhan-model.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/chrism0dwk/wuhan/HEAD/vignettes/wuhan-model.Rmd --------------------------------------------------------------------------------