├── .gitignore ├── AUTHORS ├── COPYING ├── ChangeLog ├── Dockerfile ├── INSTALL ├── LICENSE_1_0.txt ├── Makefile.am ├── NEWS ├── README ├── README.md ├── autogen.sh ├── bump_version.bash ├── changelog.dssp ├── configure.ac ├── doc ├── mkdssp.1 └── mkdssp.html ├── docker-compose.yml ├── m4 ├── ax_boost_base.m4 ├── ax_boost_date_time.m4 ├── ax_boost_filesystem.m4 ├── ax_boost_iostreams.m4 ├── ax_boost_program_options.m4 ├── ax_boost_regex.m4 ├── ax_boost_system.m4 ├── ax_boost_thread.m4 ├── ax_boost_unit_test_framework.m4 └── ax_check_library.m4 ├── run_test.sh ├── src ├── align-2d.h ├── buffer.h ├── dssp.cpp ├── dssp.h ├── iocif.cpp ├── iocif.h ├── mas.cpp ├── mas.h ├── matrix.cpp ├── matrix.h ├── mkdssp.cpp ├── primitives-3d.cpp ├── primitives-3d.h ├── structure.cpp ├── structure.h ├── utils.cpp └── utils.h └── tests └── test_readpdb.cpp /.gitignore: -------------------------------------------------------------------------------- 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