├── CONTACT.txt ├── LICENSE.txt ├── README.md ├── __init__.py ├── __pycache__ ├── eventClusterer.cpython-35.pyc ├── eventGenerator.cpython-35.pyc ├── fileMerger.cpython-35.pyc ├── psiCalculator.cpython-35.pyc ├── psiPerGene.cpython-35.pyc └── significanceCalculator.cpython-35.pyc ├── eventClusterer.py ├── eventGenerator.py ├── fileMerger.py ├── lib ├── __init__.py ├── __pycache__ │ ├── __init__.cpython-35.pyc │ ├── cluster_tools.cpython-35.pyc │ ├── diff_tools.cpython-35.pyc │ ├── event.cpython-35.pyc │ ├── gtf_store.cpython-35.pyc │ ├── optics.cpython-35.pyc │ ├── tools.cpython-35.pyc │ └── var_event.cpython-35.pyc ├── cluster_tools.py ├── diff_tools.py ├── event.py ├── gtf_store.py ├── optics.py ├── tools.py └── var_event.py ├── multipleFieldSelection.py ├── psiCalculator.py ├── psiPerGene.py ├── rmats_to_suppa_ids_A3_events.pl ├── rmats_to_suppa_ids_A5_events.pl ├── rmats_to_suppa_ids_SE_events.pl ├── scripts ├── Volcano_MA_plot.R ├── format_Ensembl_ids.R ├── 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