├── .gitignore ├── .travis.yml ├── README.md ├── analysis ├── AnalysisNotebook.ipynb ├── PlotMaking.ipynb ├── Scaling Plots.ipynb ├── Sunspot-Single-Tile.ipynb ├── Vertex Resolution.ipynb ├── accuracy_calculator.py ├── neutrino_energy.py ├── plot_occupancy.py ├── plots.py ├── setup.py ├── training.py └── voxel_occupancy.py ├── benchmark_performance.py ├── bin ├── __init__.py ├── analyze_profiles.py └── exec.py ├── example_data └── cosmic_tagging_light.h5 ├── example_submission_scripts ├── measure_scaling.sh ├── qsub_polaris.sh ├── run_ct.sh └── sunspot │ ├── measure_scaling.sh │ ├── multi_instance_launch.sh │ ├── perf_measurement_single_node.sh │ ├── run_ct_tf_a21_deterministic_multiGPU.sh │ ├── run_ct_tf_a21_deterministic_singleGPU.sh │ ├── run_ct_tf_a21_deterministic_singleSPR.sh │ ├── single_node_instance_spawn.sh │ ├── train_pt_single_tile.sh │ ├── train_pt_single_tile_ddp-convergence.sh │ ├── train_pt_single_tile_ddp.sh │ ├── train_tf_cpu.sh │ ├── train_tf_cpu_hvd.sh │ ├── train_tf_single_tile.sh │ └── train_tf_single_tile_hvd.sh ├── generate_configs.py ├── larcv_scripts ├── preprocess.cfg ├── preprocess.json ├── preprocess_dense.cfg ├── preprocess_downsample.cfg ├── preprocess_downsample_dense.cfg └── randomize.cfg ├── performance-measurement ├── analyze-performance-test.py ├── common.py ├── create_dataframe_from_run.py └── run_performance_test.py ├── pytest.ini ├── requirements.txt ├── src ├── __init__.py ├── config │ ├── SCC_21.yaml │ ├── __init__.py │ ├── a21-deterministic.yaml │ ├── a21.yaml │ ├── config.py │ ├── config.yaml │ ├── data.py │ ├── framework.py │ ├── mode.py │ ├── network.py │ ├── optimizer.py │ ├── polaris.yaml │ └── sn-at.yaml ├── networks │ ├── __init__.py │ ├── tensorflow │ │ ├── AccuracyCalculator.py │ │ ├── LossCalculator.py │ │ ├── uresnet2D.py │ │ └── uresnet3D.py │ └── torch │ │ ├── LossCalculator.py │ │ ├── sparseuresnet3D.py │ │ ├── uresnet2D.py │ │ └── uresnet3D.py └── utils │ ├── __init__.py │ ├── core │ ├── __init__.py │ ├── larcvio │ │ ├── __init__.py │ │ ├── data_transforms.py │ │ └── larcv_fetcher.py │ ├── mpi_utils.py │ └── trainercore.py │ ├── tensorflow1 │ ├── distributed_trainer.py │ └── trainer.py │ ├── tensorflow2 │ ├── distributed_trainer.py │ └── trainer.py │ └── torch │ ├── distributed_trainer.py │ └── trainer.py └── tests ├── conftest.py ├── io └── test_io.py ├── network_creation └── test_network_creation.py ├── tensorflow ├── test_network_creation_tf.py ├── test_network_creation_tf3D.py └── test_tf_training_and_inference.py └── torch ├── test_network_creation_torch.py ├── test_network_creation_torch3D.py ├── test_network_creation_torchSCN.py └── test_torch_training_and_inference.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/coreyjadams/CosmicTagger/HEAD/.gitignore -------------------------------------------------------------------------------- /.travis.yml: 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