├── ATAC.jpg ├── LICENSE ├── README.md ├── Snakefile ├── bsub_cluster.py ├── cluster.json ├── config.yaml ├── jobscript.sh ├── pyflow-ATACseq.sh ├── pyflow-drmaa-ATACseq.sh ├── rule_diagram.png └── sample2json.py /ATAC.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/ATAC.jpg -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/README.md -------------------------------------------------------------------------------- /Snakefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/Snakefile -------------------------------------------------------------------------------- /bsub_cluster.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/bsub_cluster.py -------------------------------------------------------------------------------- /cluster.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/cluster.json -------------------------------------------------------------------------------- /config.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/config.yaml -------------------------------------------------------------------------------- /jobscript.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/jobscript.sh -------------------------------------------------------------------------------- /pyflow-ATACseq.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/pyflow-ATACseq.sh -------------------------------------------------------------------------------- /pyflow-drmaa-ATACseq.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/pyflow-drmaa-ATACseq.sh -------------------------------------------------------------------------------- /rule_diagram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/rule_diagram.png -------------------------------------------------------------------------------- /sample2json.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/crazyhottommy/pyflow-ATACseq/HEAD/sample2json.py --------------------------------------------------------------------------------