├── README.md ├── data_generator_scripts ├── README.md ├── he_to_binary_mask_final.m ├── save_stainnorm_mm.m ├── seg_and_bnd.m ├── train_val_split_names.mat └── transform_dataset_anno.m ├── patch_net ├── adamw_r │ ├── LICENSE │ ├── README.md │ ├── __pycache__ │ │ ├── adamw.cpython-36.pyc │ │ ├── adamw.cpython-37.pyc │ │ ├── cyclic_scheduler.cpython-36.pyc │ │ └── cyclic_scheduler.cpython-37.pyc │ ├── adamw.py │ └── cyclic_scheduler.py ├── custom.py ├── dataset.py ├── eval.py ├── eval_testset.py ├── eval_testset_all.py ├── evaluate.py ├── evaluate_testset.py ├── find_best_snapshot.py ├── losses.py ├── main.py ├── metrics.py └── patch_dense_net.py └── tafe ├── DenseEncoderIAMUShapeDecoder.py ├── DenseNet.py ├── adamw_r ├── LICENSE ├── README.md ├── __pycache__ │ ├── adamw.cpython-36.pyc │ └── cyclic_scheduler.cpython-36.pyc ├── adamw.py └── cyclic_scheduler.py ├── baseline_faircmp.py ├── custom.py ├── dataset.py ├── evaluate.py ├── evaluate_testset.py ├── loss.py ├── 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