├── .gitignore ├── .readthedocs.yml ├── README.md ├── adding_new_pages.md ├── basicstrap ├── __init__.py ├── directives.py └── templates │ └── basicstrap │ ├── _theme_preview.html │ ├── header.html │ ├── layout.html │ ├── mobilesidebar.html │ ├── search.html │ ├── searchbox.html │ ├── searchresults.html │ ├── static │ ├── css │ │ ├── adjust_theme │ │ │ ├── _common_adjust.css │ │ │ ├── bootswatch-amelia.css_t │ │ │ ├── bootswatch-cerulean.css_t │ │ │ ├── bootswatch-cosmo.css_t │ │ │ ├── bootswatch-cyborg.css_t │ │ │ ├── bootswatch-darkly.css_t │ │ │ ├── bootswatch-flatly.css_t │ │ │ ├── bootswatch-journal.css_t │ │ │ ├── bootswatch-lumen.css_t │ │ │ ├── bootswatch-paper.css_t │ │ │ ├── bootswatch-readable.css_t │ │ │ ├── bootswatch-sandstone.css_t │ │ │ ├── bootswatch-simplex.css_t │ │ │ ├── bootswatch-slate.css_t │ │ │ ├── bootswatch-solar.css_t │ │ │ ├── bootswatch-spacelab.css_t │ │ │ ├── bootswatch-spruce.css_t │ │ │ ├── bootswatch-superhero.css_t │ │ │ ├── bootswatch-united.css_t │ │ │ ├── bootswatch-yeti.css_t │ │ │ └── geo-bootstrap.css_t │ │ ├── app.fb0c6e1c.css │ │ ├── basicstrap-base.css │ │ ├── basicstrap.css_t │ │ ├── bootstrap2 │ │ │ ├── bootstrap-responsive.min.css │ │ │ ├── bootstrap.min.css │ │ │ ├── bootswatch-amelia.css │ │ │ ├── bootswatch-cerulean.css │ │ │ ├── bootswatch-cosmo.css │ │ │ ├── bootswatch-cyborg.css │ │ │ ├── bootswatch-flatly.css │ │ │ ├── bootswatch-journal.css │ │ │ ├── bootswatch-readable.css │ │ │ ├── bootswatch-simplex.css │ │ │ ├── bootswatch-slate.css │ │ │ ├── bootswatch-spacelab.css │ │ │ ├── bootswatch-spruce.css │ │ │ ├── bootswatch-superhero.css │ │ │ ├── bootswatch-united.css │ │ │ └── geo-bootstrap.css │ │ ├── bootstrap3 │ │ │ ├── bootstrap-non-responsive.css │ │ │ ├── bootstrap-theme.min.css │ │ │ ├── bootstrap.min.css │ │ │ ├── bootswatch-amelia.css │ │ │ ├── bootswatch-cerulean.css │ │ │ ├── bootswatch-cosmo.css │ │ │ ├── bootswatch-cyborg.css │ │ │ ├── bootswatch-darkly.css │ │ │ ├── bootswatch-flatly.css │ │ │ ├── bootswatch-journal.css │ │ │ ├── bootswatch-lumen.css │ │ │ ├── bootswatch-paper.css │ │ │ ├── bootswatch-readable.css │ │ │ ├── bootswatch-sandstone.css │ │ │ ├── bootswatch-simplex.css │ │ │ ├── bootswatch-slate.css │ │ │ ├── bootswatch-solar.css │ │ │ ├── bootswatch-spacelab.css │ │ │ ├── bootswatch-superhero.css │ │ │ ├── bootswatch-united.css │ │ │ └── bootswatch-yeti.css │ │ ├── font-awesome-ie7.min.css │ │ └── font-awesome.min.css │ ├── favicon.ico │ ├── fonts │ │ ├── FontAwesome.otf │ │ ├── fontawesome-webfont.eot │ │ ├── fontawesome-webfont.svg │ │ ├── fontawesome-webfont.ttf │ │ ├── fontawesome-webfont.woff │ │ ├── fontawesome-webfont.woff2 │ │ ├── glyphicons-halflings-regular.eot │ │ ├── glyphicons-halflings-regular.svg │ │ ├── glyphicons-halflings-regular.ttf │ │ ├── glyphicons-halflings-regular.woff │ │ └── glyphicons-halflings-regular.woff2 │ ├── img │ │ ├── flames.gif │ │ ├── glyphicons-halflings-white.png │ │ ├── glyphicons-halflings.png │ │ ├── logo.82b9c7a5.png │ │ ├── microfab.gif │ │ ├── progress.gif │ │ ├── rainbow.gif │ │ └── stars.gif │ ├── index.html │ ├── js │ │ ├── app.b5ba9b7f.js │ │ ├── app.b5ba9b7f.js.map │ │ ├── basicstrap.js_t │ │ ├── bootstrap2.min.js │ │ ├── bootstrap3.min.js │ │ ├── chunk-vendors.b4928641.js │ │ ├── chunk-vendors.b4928641.js.map │ │ ├── custom.js │ │ ├── jquery.cookie-1.4.1.min.js │ │ ├── jquery.cookie.min.js │ │ ├── jquery.min.js │ │ ├── theme-vendors.js │ │ └── theme.js │ ├── svg │ │ ├── arrow.svg │ │ ├── collaboration.svg │ │ └── search.svg │ └── vue │ │ ├── css │ │ ├── chunk-vendors.0d9171ac.css │ │ └── index.b3bca179.css │ │ ├── favicon.ico │ │ ├── img │ │ └── icon-font-size.d34757c4.svg │ │ ├── index.html │ │ └── js │ │ ├── chunk-vendors.dfce69bf.js │ │ ├── chunk-vendors.dfce69bf.js.map │ │ ├── index.9650e898.js │ │ └── index.9650e898.js.map │ └── theme.conf ├── developer_guide.md ├── docs ├── CloudDiagram.PNG ├── Makefile ├── __init__.py ├── _static │ ├── README.txt │ ├── css │ │ └── app.css │ ├── doc │ │ ├── 1Procedure_StandardAnnotation_R1.doc │ │ ├── 2Instructions_AnnotationGuideCreation_R1.doc │ │ ├── 3Template_AnnotationGuide_R1.docx.docx │ │ ├── 4Checklist.docx │ │ ├── eConsent_Evaluation Tool.pdf │ │ └── eConsent_Needs Assessment Tool.pdf │ └── img │ │ ├── chapter_10-1-study-specific-organizational.jpg │ │ ├── chapter_5_cloud_diagram.png │ │ ├── chapter_6_fhir_1.jpg │ │ ├── chapter_6_fhir_2.jpg │ │ ├── chapter_9_1-Protocol-Development-3.png │ │ ├── chapter_9_2-data-collection.png │ │ ├── chapter_9_3-cohort-screening.png │ │ ├── chapter_9_5-corpus-annotation.png │ │ └── markdown_sections.jpg ├── _templates │ ├── about.html │ └── index.html ├── auto_rebuild.sh ├── chapters │ ├── chapter_1.md │ ├── chapter_10.md │ ├── chapter_2.md │ ├── chapter_3.md │ ├── chapter_4.md │ ├── chapter_5.md │ ├── chapter_6.md │ ├── chapter_7.md │ ├── chapter_8.md │ ├── chapter_9.md │ └── markdown_tutorial.md ├── conf.py ├── contents.rst ├── make.bat ├── requirements.txt ├── test.md └── utils │ ├── __init__.py │ └── utils.py ├── example_template.html ├── modifying_depth_level.md ├── scripts └── gdoc2md.py └── ui ├── .gitignore ├── README.md ├── babel.config.js ├── package-lock.json ├── package.json ├── public ├── favicon.ico └── index.html ├── src ├── AboutPage.vue ├── CustomCollapse.vue ├── DynamicChapterSearch.vue ├── EstimatedReadTime.vue ├── Footer.vue ├── GoToTop.vue ├── Header.vue ├── Preferences.vue ├── ScrollProgression.vue ├── Search.vue ├── TocTree.vue ├── TocTreeCollapse.vue ├── assets │ ├── icon-font-size.svg │ └── logo.png ├── main.js └── public │ └── index.html ├── vue.config.js └── yarn.lock /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/.gitignore -------------------------------------------------------------------------------- /.readthedocs.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/.readthedocs.yml -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/README.md -------------------------------------------------------------------------------- /adding_new_pages.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/adding_new_pages.md -------------------------------------------------------------------------------- /basicstrap/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/__init__.py -------------------------------------------------------------------------------- /basicstrap/directives.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/directives.py -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/_theme_preview.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/_theme_preview.html -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/header.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/header.html -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/layout.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/layout.html -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/mobilesidebar.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/mobilesidebar.html -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/search.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/search.html -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/searchbox.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/searchbox.html -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/searchresults.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/searchresults.html -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/_common_adjust.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/_common_adjust.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-amelia.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-amelia.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-cerulean.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-cerulean.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-cosmo.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-cosmo.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-cyborg.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-cyborg.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-darkly.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-darkly.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-flatly.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-flatly.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-journal.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-journal.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-lumen.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-lumen.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-paper.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-paper.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-readable.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-readable.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-sandstone.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-sandstone.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-simplex.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-simplex.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-slate.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-slate.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-solar.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-solar.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-spacelab.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-spacelab.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-spruce.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-spruce.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-superhero.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-superhero.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-united.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-united.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-yeti.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/bootswatch-yeti.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/adjust_theme/geo-bootstrap.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/adjust_theme/geo-bootstrap.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/app.fb0c6e1c.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/app.fb0c6e1c.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/basicstrap-base.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/basicstrap-base.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/basicstrap.css_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/basicstrap.css_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootstrap-responsive.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootstrap-responsive.min.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootstrap.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootstrap.min.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-amelia.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-amelia.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-cerulean.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-cerulean.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-cosmo.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-cosmo.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-cyborg.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-cyborg.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-flatly.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-flatly.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-journal.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-journal.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-readable.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-readable.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-simplex.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-simplex.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-slate.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-slate.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-spacelab.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-spacelab.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-spruce.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-spruce.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-superhero.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-superhero.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-united.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/bootswatch-united.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap2/geo-bootstrap.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap2/geo-bootstrap.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootstrap-non-responsive.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootstrap-non-responsive.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootstrap-theme.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootstrap-theme.min.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootstrap.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootstrap.min.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-amelia.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-amelia.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-cerulean.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-cerulean.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-cosmo.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-cosmo.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-cyborg.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-cyborg.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-darkly.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-darkly.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-flatly.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-flatly.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-journal.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-journal.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-lumen.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-lumen.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-paper.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-paper.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-readable.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-readable.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-sandstone.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-sandstone.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-simplex.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-simplex.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-slate.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-slate.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-solar.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-solar.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-spacelab.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-spacelab.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-superhero.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-superhero.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-united.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-united.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-yeti.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/bootstrap3/bootswatch-yeti.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/font-awesome-ie7.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/font-awesome-ie7.min.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/css/font-awesome.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/css/font-awesome.min.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/favicon.ico -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/FontAwesome.otf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/FontAwesome.otf -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.eot: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.eot -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.svg -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.ttf -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.woff: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.woff -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.woff2: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/fontawesome-webfont.woff2 -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.eot: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.eot -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.svg -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.ttf -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.woff: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.woff -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.woff2: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/fonts/glyphicons-halflings-regular.woff2 -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/img/flames.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/img/flames.gif -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/img/glyphicons-halflings-white.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/img/glyphicons-halflings-white.png -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/img/glyphicons-halflings.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/img/glyphicons-halflings.png -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/img/logo.82b9c7a5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/img/logo.82b9c7a5.png -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/img/microfab.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/img/microfab.gif -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/img/progress.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/img/progress.gif -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/img/rainbow.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/img/rainbow.gif -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/img/stars.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/img/stars.gif -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/index.html -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/app.b5ba9b7f.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/app.b5ba9b7f.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/app.b5ba9b7f.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/app.b5ba9b7f.js.map -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/basicstrap.js_t: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/basicstrap.js_t -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/bootstrap2.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/bootstrap2.min.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/bootstrap3.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/bootstrap3.min.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/chunk-vendors.b4928641.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/chunk-vendors.b4928641.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/chunk-vendors.b4928641.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/chunk-vendors.b4928641.js.map -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/custom.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/custom.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/jquery.cookie-1.4.1.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/jquery.cookie-1.4.1.min.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/jquery.cookie.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/jquery.cookie.min.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/jquery.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/jquery.min.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/theme-vendors.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/js/theme-vendors.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/js/theme.js: -------------------------------------------------------------------------------- 1 | ../../ui/dist/js/app.js 2 | -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/svg/arrow.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/svg/arrow.svg -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/svg/collaboration.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/svg/collaboration.svg -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/svg/search.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/svg/search.svg -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/vue/css/chunk-vendors.0d9171ac.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/vue/css/chunk-vendors.0d9171ac.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/vue/css/index.b3bca179.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/vue/css/index.b3bca179.css -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/vue/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/vue/favicon.ico -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/vue/img/icon-font-size.d34757c4.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/vue/img/icon-font-size.d34757c4.svg -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/vue/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/vue/index.html -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/vue/js/chunk-vendors.dfce69bf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/vue/js/chunk-vendors.dfce69bf.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/vue/js/chunk-vendors.dfce69bf.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/vue/js/chunk-vendors.dfce69bf.js.map -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/vue/js/index.9650e898.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/vue/js/index.9650e898.js -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/static/vue/js/index.9650e898.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/static/vue/js/index.9650e898.js.map -------------------------------------------------------------------------------- /basicstrap/templates/basicstrap/theme.conf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/basicstrap/templates/basicstrap/theme.conf -------------------------------------------------------------------------------- /developer_guide.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/developer_guide.md -------------------------------------------------------------------------------- /docs/CloudDiagram.PNG: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/CloudDiagram.PNG -------------------------------------------------------------------------------- /docs/Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/Makefile -------------------------------------------------------------------------------- /docs/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /docs/_static/README.txt: -------------------------------------------------------------------------------- 1 | All static files go to this folder. -------------------------------------------------------------------------------- /docs/_static/css/app.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/css/app.css -------------------------------------------------------------------------------- /docs/_static/doc/1Procedure_StandardAnnotation_R1.doc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/doc/1Procedure_StandardAnnotation_R1.doc -------------------------------------------------------------------------------- /docs/_static/doc/2Instructions_AnnotationGuideCreation_R1.doc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/doc/2Instructions_AnnotationGuideCreation_R1.doc -------------------------------------------------------------------------------- /docs/_static/doc/3Template_AnnotationGuide_R1.docx.docx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/doc/3Template_AnnotationGuide_R1.docx.docx -------------------------------------------------------------------------------- /docs/_static/doc/4Checklist.docx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/doc/4Checklist.docx -------------------------------------------------------------------------------- /docs/_static/doc/eConsent_Evaluation Tool.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/doc/eConsent_Evaluation Tool.pdf -------------------------------------------------------------------------------- /docs/_static/doc/eConsent_Needs Assessment Tool.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/doc/eConsent_Needs Assessment Tool.pdf -------------------------------------------------------------------------------- /docs/_static/img/chapter_10-1-study-specific-organizational.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/img/chapter_10-1-study-specific-organizational.jpg -------------------------------------------------------------------------------- /docs/_static/img/chapter_5_cloud_diagram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/img/chapter_5_cloud_diagram.png -------------------------------------------------------------------------------- /docs/_static/img/chapter_6_fhir_1.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/img/chapter_6_fhir_1.jpg -------------------------------------------------------------------------------- /docs/_static/img/chapter_6_fhir_2.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/img/chapter_6_fhir_2.jpg -------------------------------------------------------------------------------- /docs/_static/img/chapter_9_1-Protocol-Development-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/img/chapter_9_1-Protocol-Development-3.png -------------------------------------------------------------------------------- /docs/_static/img/chapter_9_2-data-collection.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/img/chapter_9_2-data-collection.png -------------------------------------------------------------------------------- /docs/_static/img/chapter_9_3-cohort-screening.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/img/chapter_9_3-cohort-screening.png -------------------------------------------------------------------------------- /docs/_static/img/chapter_9_5-corpus-annotation.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/img/chapter_9_5-corpus-annotation.png -------------------------------------------------------------------------------- /docs/_static/img/markdown_sections.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_static/img/markdown_sections.jpg -------------------------------------------------------------------------------- /docs/_templates/about.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_templates/about.html -------------------------------------------------------------------------------- /docs/_templates/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/_templates/index.html -------------------------------------------------------------------------------- /docs/auto_rebuild.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/auto_rebuild.sh -------------------------------------------------------------------------------- /docs/chapters/chapter_1.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_1.md -------------------------------------------------------------------------------- /docs/chapters/chapter_10.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_10.md -------------------------------------------------------------------------------- /docs/chapters/chapter_2.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_2.md -------------------------------------------------------------------------------- /docs/chapters/chapter_3.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_3.md -------------------------------------------------------------------------------- /docs/chapters/chapter_4.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_4.md -------------------------------------------------------------------------------- /docs/chapters/chapter_5.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_5.md -------------------------------------------------------------------------------- /docs/chapters/chapter_6.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_6.md -------------------------------------------------------------------------------- /docs/chapters/chapter_7.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_7.md -------------------------------------------------------------------------------- /docs/chapters/chapter_8.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_8.md -------------------------------------------------------------------------------- /docs/chapters/chapter_9.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/chapter_9.md -------------------------------------------------------------------------------- /docs/chapters/markdown_tutorial.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/chapters/markdown_tutorial.md -------------------------------------------------------------------------------- /docs/conf.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/conf.py -------------------------------------------------------------------------------- /docs/contents.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/contents.rst -------------------------------------------------------------------------------- /docs/make.bat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/make.bat -------------------------------------------------------------------------------- /docs/requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/requirements.txt -------------------------------------------------------------------------------- /docs/test.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/test.md -------------------------------------------------------------------------------- /docs/utils/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /docs/utils/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/docs/utils/utils.py -------------------------------------------------------------------------------- /example_template.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/example_template.html -------------------------------------------------------------------------------- /modifying_depth_level.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/modifying_depth_level.md -------------------------------------------------------------------------------- /scripts/gdoc2md.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/scripts/gdoc2md.py -------------------------------------------------------------------------------- /ui/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/.gitignore -------------------------------------------------------------------------------- /ui/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/README.md -------------------------------------------------------------------------------- /ui/babel.config.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/babel.config.js -------------------------------------------------------------------------------- /ui/package-lock.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/package-lock.json -------------------------------------------------------------------------------- /ui/package.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/package.json -------------------------------------------------------------------------------- /ui/public/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/public/favicon.ico -------------------------------------------------------------------------------- /ui/public/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/public/index.html -------------------------------------------------------------------------------- /ui/src/AboutPage.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/AboutPage.vue -------------------------------------------------------------------------------- /ui/src/CustomCollapse.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/CustomCollapse.vue -------------------------------------------------------------------------------- /ui/src/DynamicChapterSearch.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/DynamicChapterSearch.vue -------------------------------------------------------------------------------- /ui/src/EstimatedReadTime.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/EstimatedReadTime.vue -------------------------------------------------------------------------------- /ui/src/Footer.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/Footer.vue -------------------------------------------------------------------------------- /ui/src/GoToTop.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/GoToTop.vue -------------------------------------------------------------------------------- /ui/src/Header.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/Header.vue -------------------------------------------------------------------------------- /ui/src/Preferences.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/Preferences.vue -------------------------------------------------------------------------------- /ui/src/ScrollProgression.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/ScrollProgression.vue -------------------------------------------------------------------------------- /ui/src/Search.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/Search.vue -------------------------------------------------------------------------------- /ui/src/TocTree.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/TocTree.vue -------------------------------------------------------------------------------- /ui/src/TocTreeCollapse.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/TocTreeCollapse.vue -------------------------------------------------------------------------------- /ui/src/assets/icon-font-size.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/assets/icon-font-size.svg -------------------------------------------------------------------------------- /ui/src/assets/logo.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/assets/logo.png -------------------------------------------------------------------------------- /ui/src/main.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/main.js -------------------------------------------------------------------------------- /ui/src/public/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/src/public/index.html -------------------------------------------------------------------------------- /ui/vue.config.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/vue.config.js -------------------------------------------------------------------------------- /ui/yarn.lock: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/data2health/informatics-playbook/HEAD/ui/yarn.lock --------------------------------------------------------------------------------