├── Deepfold ├── Models │ ├── BaseModel.py │ ├── CartesianBaseModel.py │ ├── CartesianHighresModel.py │ ├── CubedSphereBandedDisjointModel.py │ ├── CubedSphereBandedModel.py │ ├── CubedSphereBaseModel.py │ ├── CubedSphereDenseModel.py │ ├── CubedSphereModel.py │ ├── SphericalBaseModel.py │ ├── SphericalModel.py │ └── __init__.py ├── Ops │ ├── __init__.py │ ├── conv.py │ └── pad_cubed_sphere.py ├── Utils │ ├── __init__.py │ ├── grid_utils.py │ └── pad_wrap.py ├── __init__.py ├── batch_factory.py └── grid.py ├── README.md └── scripts ├── extract.py ├── parse_pdbs.py ├── run.py └── utils.py /Deepfold/Models/BaseModel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/deepfold/NIPS2017/HEAD/Deepfold/Models/BaseModel.py -------------------------------------------------------------------------------- /Deepfold/Models/CartesianBaseModel.py: -------------------------------------------------------------------------------- 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