├── LICENSE ├── README.html ├── README.md └── src ├── Makefile ├── aligner.cpp ├── aligner.h ├── desc.h ├── form.cpp ├── form.h ├── formh.cpp ├── formh.h ├── genhash.cpp ├── graph.cpp ├── graph.h ├── hash.cpp ├── hash.h ├── kseq.h ├── ksw.c ├── ksw.h ├── main.cpp ├── readfl.cpp ├── readfl.h ├── tags ├── whash.cpp └── whash.h /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dfguan/rHAT/HEAD/LICENSE -------------------------------------------------------------------------------- /README.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dfguan/rHAT/HEAD/README.html -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dfguan/rHAT/HEAD/README.md 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