├── .gitignore ├── LICENSE ├── Linear_Ham.png ├── OU2Dc.png ├── README.md ├── high_speed.gif ├── notebooks ├── Make_1D_animation_Fokker_Planck.ipynb └── minimal_run │ ├── Otto_dynamics.py │ └── score_function_multid_seperate.py └── odes_for_sdes ├── experiments ├── 2D_OU │ ├── 2D_KDE_OU_deterministic_stochastic.py │ ├── 2D_OU_calculate_Wass_between_analytic_and_KDE.py │ ├── 2D_OU_calculate_Wass_between_analytic_and_stochastic.py │ ├── 2D_OU_simulate_stochastic_trajectories.py │ ├── calculate_Wasserstein_for_analitic_vs_deterministic_for_OU_2dim.py │ ├── calculate_Wasserstein_for_stochastic_vs_deterministic_for_OU_2dim.py │ ├── calculate_Wasserstein_for_stochastic_vs_stochastic_for_OU_2dim.py │ ├── calculate_and_store_analytic_trajectories_2D_OU.py │ ├── calculate_mean_variance_2d_OU.py │ ├── plot_2D_OU_with_KDE.py │ ├── plot_2D_distrib.py │ ├── plot_OU_2D_distributions_jointplots.py │ ├── plot_statistics.py │ ├── score_fucntion2.py │ ├── score_function_multid_seperate.py │ ├── score_function_sparse.py │ ├── simulate_and_store_deterministic_trajectories_SPARSE_2D_OU.py │ └── try_analytic_ou_dims.py ├── Hamiltonian │ ├── deterministic_stochastic_correct_leapfrog.py │ ├── plot_2D_distrib.py │ ├── plot_statistics.py │ └── score_function_multid_seperate.py ├── Lorenz │ ├── plot_2D_distrib.py │ ├── plot_2D_lorenz_joint_distrib.py │ └── solve_Loreny_63_Fokker_Planck.py ├── N_vs_D │ ├── N_vs_Dim_OU_ExpA-statistics-compare.py │ ├── N_vs_Dim_OU_ExpA-statistics-simulate.py │ ├── N_vs_dimension_for_OU.py │ ├── N_vs_dimension_for_OU_KL_optimal_N.py │ ├── N_vs_dimension_for_OU_KL_optimal_N_fewN.py │ ├── N_vs_dimension_for_OU_KL_optimal_N_fewN_M200.py │ ├── N_vs_dimension_for_OU_KL_optimal_N_fewN_Stochastic.py │ ├── create_and_store_analytic_trajectories_for_N_vs_Dim_experiment.py │ ├── read_multi_dim_FEW_data.py │ └── read_multi_dim_FEW_data_M200.py ├── Otto_dynamics_find_optimal_N_for_stochastic.py ├── Otto_dynamics_find_optimal_N_for_stochastic_2D_OU.py ├── __init__.py ├── colors2.py ├── complexity │ ├── compcomplexity_particles_trial.py │ ├── compcomplexity_particles_trial_mean_fluctuations.py │ ├── compcomplexity_particles_trial_mean_fluctuations_stoch.py │ ├── compcomplexity_particles_trial_stoch.py │ ├── plot_complexity.py │ ├── plot_complexity_fluctuations.py │ └── score_function_multid_seperate.py ├── deterministic_stochastic_Multi_D.py ├── deterministic_stochastic_with_kl.py ├── double_well │ ├── calculate_wasserstein_1d_Double_Well_deterministic.py │ ├── calculate_wasserstein_1d_Double_Well_stochastic.py │ ├── calculate_wasserstein_between_stochastic_Ninf_and_stochastic.py │ ├── plot_2D_distrib.py │ ├── plot_distributionsstatistics_for_1D_double_well_NEW.py │ ├── plot_statistics.py │ ├── read_and_plot_NEW_1D_Double_Well_comparisons.py │ ├── score_fucntion2.py │ ├── score_function_sparse.py │ ├── simulate_and_store_deterministic_trajectories_SPARSE_DOUBLE_WELL.py │ ├── simulate_and_store_deterministic_trajectories_full_DOUBLE_WELL.py │ ├── simulate_and_store_deterministic_trajectories_full_prior_on_function_DOUBLE_WELL.py │ └── simulate_and_store_stochastic_trajectories_DOUBLE_WELL.py ├── plot_2D_distrib.py ├── plot_statistics.py └── state_dependent │ ├── deterministic_stochastic_State_Depenent_Multi_D.py │ ├── deterministic_stochastic_short_state_dependent.py │ ├── plot_state_dependent.py │ ├── plot_statistics.py │ ├── simulate_and_store_State_Dependent_deterministic.py │ └── simulate_and_store_State_Dependent_stochastic.py ├── kernels └── __init__.py ├── models ├── FHN_neuron.py ├── __init__.py └── two_dim_multiwell.py ├── run_Fokker_Planck.py ├── score_estimators ├── __init__.py ├── score_function_estimators.py └── score_function_estimators_pytorch.py ├── tests └── __init__.py └── utils ├── 2D_OU_calculate_Wass_between_analytic_and_stochastic.py ├── __init__.py └── plot_2D_distrib.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/LICENSE -------------------------------------------------------------------------------- /Linear_Ham.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/Linear_Ham.png -------------------------------------------------------------------------------- /OU2Dc.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/OU2Dc.png -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/README.md -------------------------------------------------------------------------------- /high_speed.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/high_speed.gif -------------------------------------------------------------------------------- /notebooks/Make_1D_animation_Fokker_Planck.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/notebooks/Make_1D_animation_Fokker_Planck.ipynb -------------------------------------------------------------------------------- /notebooks/minimal_run/Otto_dynamics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/notebooks/minimal_run/Otto_dynamics.py -------------------------------------------------------------------------------- /notebooks/minimal_run/score_function_multid_seperate.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/notebooks/minimal_run/score_function_multid_seperate.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/2D_KDE_OU_deterministic_stochastic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/2D_KDE_OU_deterministic_stochastic.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/2D_OU_calculate_Wass_between_analytic_and_KDE.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/2D_OU_calculate_Wass_between_analytic_and_KDE.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/2D_OU_calculate_Wass_between_analytic_and_stochastic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/2D_OU_calculate_Wass_between_analytic_and_stochastic.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/2D_OU_simulate_stochastic_trajectories.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/2D_OU_simulate_stochastic_trajectories.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/calculate_Wasserstein_for_analitic_vs_deterministic_for_OU_2dim.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/calculate_Wasserstein_for_analitic_vs_deterministic_for_OU_2dim.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/calculate_Wasserstein_for_stochastic_vs_deterministic_for_OU_2dim.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/calculate_Wasserstein_for_stochastic_vs_deterministic_for_OU_2dim.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/calculate_Wasserstein_for_stochastic_vs_stochastic_for_OU_2dim.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/calculate_Wasserstein_for_stochastic_vs_stochastic_for_OU_2dim.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/calculate_and_store_analytic_trajectories_2D_OU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/calculate_and_store_analytic_trajectories_2D_OU.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/calculate_mean_variance_2d_OU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/calculate_mean_variance_2d_OU.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/plot_2D_OU_with_KDE.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/plot_2D_OU_with_KDE.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/plot_2D_distrib.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/plot_2D_distrib.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/plot_OU_2D_distributions_jointplots.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/plot_OU_2D_distributions_jointplots.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/plot_statistics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/plot_statistics.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/score_fucntion2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/score_fucntion2.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/score_function_multid_seperate.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/score_function_multid_seperate.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/score_function_sparse.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/score_function_sparse.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/simulate_and_store_deterministic_trajectories_SPARSE_2D_OU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/simulate_and_store_deterministic_trajectories_SPARSE_2D_OU.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/2D_OU/try_analytic_ou_dims.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/2D_OU/try_analytic_ou_dims.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/Hamiltonian/deterministic_stochastic_correct_leapfrog.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/Hamiltonian/deterministic_stochastic_correct_leapfrog.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/Hamiltonian/plot_2D_distrib.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/Hamiltonian/plot_2D_distrib.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/Hamiltonian/plot_statistics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/Hamiltonian/plot_statistics.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/Hamiltonian/score_function_multid_seperate.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/Hamiltonian/score_function_multid_seperate.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/Lorenz/plot_2D_distrib.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/Lorenz/plot_2D_distrib.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/Lorenz/plot_2D_lorenz_joint_distrib.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/Lorenz/plot_2D_lorenz_joint_distrib.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/Lorenz/solve_Loreny_63_Fokker_Planck.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/Lorenz/solve_Loreny_63_Fokker_Planck.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/N_vs_Dim_OU_ExpA-statistics-compare.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/N_vs_Dim_OU_ExpA-statistics-compare.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/N_vs_Dim_OU_ExpA-statistics-simulate.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/N_vs_Dim_OU_ExpA-statistics-simulate.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU_KL_optimal_N.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU_KL_optimal_N.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU_KL_optimal_N_fewN.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU_KL_optimal_N_fewN.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU_KL_optimal_N_fewN_M200.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU_KL_optimal_N_fewN_M200.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU_KL_optimal_N_fewN_Stochastic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/N_vs_dimension_for_OU_KL_optimal_N_fewN_Stochastic.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/create_and_store_analytic_trajectories_for_N_vs_Dim_experiment.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/create_and_store_analytic_trajectories_for_N_vs_Dim_experiment.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/read_multi_dim_FEW_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/read_multi_dim_FEW_data.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/N_vs_D/read_multi_dim_FEW_data_M200.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/N_vs_D/read_multi_dim_FEW_data_M200.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/Otto_dynamics_find_optimal_N_for_stochastic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/Otto_dynamics_find_optimal_N_for_stochastic.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/Otto_dynamics_find_optimal_N_for_stochastic_2D_OU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/Otto_dynamics_find_optimal_N_for_stochastic_2D_OU.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/__init__.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/colors2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/colors2.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/complexity/compcomplexity_particles_trial.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/complexity/compcomplexity_particles_trial.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/complexity/compcomplexity_particles_trial_mean_fluctuations.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/complexity/compcomplexity_particles_trial_mean_fluctuations.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/complexity/compcomplexity_particles_trial_mean_fluctuations_stoch.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/complexity/compcomplexity_particles_trial_mean_fluctuations_stoch.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/complexity/compcomplexity_particles_trial_stoch.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/complexity/compcomplexity_particles_trial_stoch.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/complexity/plot_complexity.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/complexity/plot_complexity.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/complexity/plot_complexity_fluctuations.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/complexity/plot_complexity_fluctuations.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/complexity/score_function_multid_seperate.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/complexity/score_function_multid_seperate.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/deterministic_stochastic_Multi_D.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/deterministic_stochastic_Multi_D.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/deterministic_stochastic_with_kl.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/deterministic_stochastic_with_kl.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/calculate_wasserstein_1d_Double_Well_deterministic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/calculate_wasserstein_1d_Double_Well_deterministic.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/calculate_wasserstein_1d_Double_Well_stochastic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/calculate_wasserstein_1d_Double_Well_stochastic.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/calculate_wasserstein_between_stochastic_Ninf_and_stochastic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/calculate_wasserstein_between_stochastic_Ninf_and_stochastic.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/plot_2D_distrib.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/plot_2D_distrib.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/plot_distributionsstatistics_for_1D_double_well_NEW.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/plot_distributionsstatistics_for_1D_double_well_NEW.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/plot_statistics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/plot_statistics.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/read_and_plot_NEW_1D_Double_Well_comparisons.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/read_and_plot_NEW_1D_Double_Well_comparisons.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/score_fucntion2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/score_fucntion2.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/score_function_sparse.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/score_function_sparse.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/simulate_and_store_deterministic_trajectories_SPARSE_DOUBLE_WELL.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/simulate_and_store_deterministic_trajectories_SPARSE_DOUBLE_WELL.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/simulate_and_store_deterministic_trajectories_full_DOUBLE_WELL.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/simulate_and_store_deterministic_trajectories_full_DOUBLE_WELL.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/simulate_and_store_deterministic_trajectories_full_prior_on_function_DOUBLE_WELL.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/simulate_and_store_deterministic_trajectories_full_prior_on_function_DOUBLE_WELL.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/double_well/simulate_and_store_stochastic_trajectories_DOUBLE_WELL.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/double_well/simulate_and_store_stochastic_trajectories_DOUBLE_WELL.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/plot_2D_distrib.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/plot_2D_distrib.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/plot_statistics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/plot_statistics.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/state_dependent/deterministic_stochastic_State_Depenent_Multi_D.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/state_dependent/deterministic_stochastic_State_Depenent_Multi_D.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/state_dependent/deterministic_stochastic_short_state_dependent.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/state_dependent/deterministic_stochastic_short_state_dependent.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/state_dependent/plot_state_dependent.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/state_dependent/plot_state_dependent.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/state_dependent/plot_statistics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/state_dependent/plot_statistics.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/state_dependent/simulate_and_store_State_Dependent_deterministic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/state_dependent/simulate_and_store_State_Dependent_deterministic.py -------------------------------------------------------------------------------- /odes_for_sdes/experiments/state_dependent/simulate_and_store_State_Dependent_stochastic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/experiments/state_dependent/simulate_and_store_State_Dependent_stochastic.py -------------------------------------------------------------------------------- /odes_for_sdes/kernels/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/kernels/__init__.py -------------------------------------------------------------------------------- /odes_for_sdes/models/FHN_neuron.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/models/FHN_neuron.py -------------------------------------------------------------------------------- /odes_for_sdes/models/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/models/__init__.py -------------------------------------------------------------------------------- /odes_for_sdes/models/two_dim_multiwell.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/models/two_dim_multiwell.py -------------------------------------------------------------------------------- /odes_for_sdes/run_Fokker_Planck.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/run_Fokker_Planck.py -------------------------------------------------------------------------------- /odes_for_sdes/score_estimators/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/score_estimators/__init__.py -------------------------------------------------------------------------------- /odes_for_sdes/score_estimators/score_function_estimators.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/score_estimators/score_function_estimators.py -------------------------------------------------------------------------------- /odes_for_sdes/score_estimators/score_function_estimators_pytorch.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/score_estimators/score_function_estimators_pytorch.py -------------------------------------------------------------------------------- /odes_for_sdes/tests/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/tests/__init__.py -------------------------------------------------------------------------------- /odes_for_sdes/utils/2D_OU_calculate_Wass_between_analytic_and_stochastic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/utils/2D_OU_calculate_Wass_between_analytic_and_stochastic.py -------------------------------------------------------------------------------- /odes_for_sdes/utils/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/utils/__init__.py -------------------------------------------------------------------------------- /odes_for_sdes/utils/plot_2D_distrib.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dimitra-maoutsa/odes_for_sdes/HEAD/odes_for_sdes/utils/plot_2D_distrib.py --------------------------------------------------------------------------------