├── .Rbuildignore ├── .github ├── .gitignore └── workflows │ ├── R-CMD-check.yaml │ └── pkgdown.yaml ├── .gitignore ├── .travis.yml ├── CRAN-RELEASE ├── DESCRIPTION ├── Makefile ├── NAMESPACE ├── NEWS.md ├── R ├── .gitignore ├── RcppExports.R ├── aaa.R ├── class-abstract.R ├── class-filearray.R ├── class-fstarray.R ├── generics.R ├── lazyarray.R ├── model-lm.R ├── utils.R └── zzz.R ├── cran-comments.md ├── experiment ├── class-lazyarray.R ├── class-lazymatrix.R ├── create_array.R ├── data │ └── .gitignore ├── funcs-lm.R ├── junk.sh ├── lazyarray.R ├── lazymatrix.R ├── loader2ext.cpp ├── loader2ext.h ├── old │ ├── bigmemory-example.R │ ├── bmWrapper.cpp │ ├── bmWrapper.h │ ├── classLazyArray.h │ ├── comparison-bigmemory.R │ ├── comparison-lazyarray.R │ ├── filearrsub.R │ ├── int64_double.cpp │ ├── junk.R │ ├── memcpy.cpp │ ├── new_subset.R │ ├── old_scripts.R │ ├── profile.R │ ├── s4-definition.R │ ├── s4-generics.R │ ├── speed test.R │ ├── speed_test.R │ ├── test_io.R │ └── write.R ├── performance-fst-vs-file.R ├── s3-lazyarray.R └── s3-lazymatrix.R ├── inst ├── WORDLIST └── include │ ├── interfaces │ ├── BMArray.h │ ├── FstArray.h │ ├── FstMatrix.h │ ├── LazyArrayBase.h │ └── entry.h │ ├── lazyarray.h │ └── lazyarray_RcppExports.h ├── lazyarray.Rproj ├── man ├── .gitignore ├── auto_clear_lazyarray.Rd ├── chunk_map.Rd ├── crossprod.Rd ├── lazy_parallel.Rd ├── lazyarray-threads.Rd ├── lazyarray.Rd ├── lazylm.Rd ├── partition_map.Rd ├── partition_table.Rd └── typeof-AbstractLazyArray-method.Rd ├── readme.md ├── src ├── .gitignore ├── Makevars ├── RcppExports.cpp ├── classIndexSchedule.cpp ├── classIndexSchedule.h ├── classLazyArray.cpp ├── common.cpp ├── common.h ├── fstWrapper.cpp ├── fstWrapper.h ├── indexConvert.cpp ├── indexConvert.h ├── lazyarray-ext.cpp ├── lazycommon.h ├── loader1.cpp ├── loader1.h ├── loader2.cpp ├── loader2.h ├── loader3.cpp ├── old │ ├── loader2ext.cpp │ ├── loader2ext.h │ └── loader3.cpp ├── openMPInterface.cpp ├── openMPInterface.h ├── playground.cpp ├── reshape.cpp ├── reshape.h ├── saver2.cpp ├── saver2.h ├── saver2ext.cpp ├── saver2ext.h ├── utils.cpp └── utils.h ├── tests ├── testthat.R └── testthat │ ├── test-cpp_io2.R │ ├── test-cpp_loc2idx.R │ ├── test-cpp_parseAndScheduleBlocks.R │ ├── test-cpp_subsetIdx.R │ ├── test-generics.R │ ├── test-lazylm.R │ ├── test-matmul.R │ ├── test-subset.R │ ├── test.cpp_io.R │ └── test.setget.R └── vignettes ├── .gitignore └── basic-usage-of-lazyarray.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dipterix/lazyarray/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | -------------------------------------------------------------------------------- /.github/workflows/R-CMD-check.yaml: 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