├── .Rbuildignore ├── .clang-format ├── .codecov.yml ├── .gitignore ├── .lintr ├── .travis.yml ├── .valgrindrc ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── R ├── RcppExports.R ├── diffusr-package.R ├── heat_diffusion.R ├── mat_util.R ├── mrw.R ├── neighbors.R └── util.R ├── README.md ├── VERSIONS.md ├── appveyor.yml ├── diffusr.Rproj ├── inst ├── NEWS ├── fig │ ├── diffusion.R │ └── diffusion.gif └── include │ ├── diffusr.h │ └── diffusr_RcppExports.h ├── man ├── diffusr-package.Rd ├── heat-diffusion-methods.Rd ├── hub.correction.Rd ├── nearest-neighbors-methods.Rd ├── normalize.laplacian.Rd ├── normalize.stochastic.Rd └── random-walk-methods.Rd ├── src ├── RcppExports.cpp ├── heat_diffusion.cpp ├── mat_util.cpp ├── mrw.cpp └── neighbors.cpp ├── tests ├── testthat.R └── testthat │ ├── test_heat.R │ ├── test_knn.R │ ├── test_mrw.R │ └── test_util.R └── vignettes └── diffusr.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- 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