├── LICENSE ├── README.md ├── data ├── getCATH.sh ├── ts50.json └── ts50remove.txt ├── models ├── cath_pretrained.data-00000-of-00002 ├── cath_pretrained.data-00001-of-00002 ├── cath_pretrained.index ├── ts50_pretrained.data-00000-of-00002 ├── ts50_pretrained.data-00001-of-00002 └── ts50_pretrained.index ├── outputs ├── cath.out ├── sc.out ├── short.out └── ts50.out └── src ├── analyze.py ├── datasets.py ├── gvp.py ├── models.py ├── test_cpd_perplexity.py ├── test_cpd_recovery.py ├── train_cpd.py └── util.py /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/drorlab/gvp/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/drorlab/gvp/HEAD/README.md -------------------------------------------------------------------------------- /data/getCATH.sh: 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