├── .dockerignore ├── .gitignore ├── LICENSE ├── README.md ├── benchmarks_readme.txt ├── biokg ├── __init__.py ├── loader.py ├── processing │ ├── __init__.py │ └── parsers.py └── util │ ├── __init__.py │ ├── extras.py │ └── io.py ├── chemical_drugbank.txt.gz ├── compile_biokg.py ├── dockerfile ├── links_description.txt ├── main.py ├── meta_description.txt ├── package_data.py ├── properties_description.txt ├── requirements.txt ├── run_all.py ├── sources.ini ├── summarize_benchmarks.py └── summarize_preprocessed.py /.dockerignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dsi-bdi/biokg/HEAD/.dockerignore -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dsi-bdi/biokg/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dsi-bdi/biokg/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dsi-bdi/biokg/HEAD/README.md -------------------------------------------------------------------------------- /benchmarks_readme.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dsi-bdi/biokg/HEAD/benchmarks_readme.txt -------------------------------------------------------------------------------- /biokg/__init__.py: -------------------------------------------------------------------------------- 1 | # 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