├── Cluster.py ├── HiCBin_linux_env.yaml ├── HiCBin_osx_env.yaml ├── HiCzin.R ├── LICENSE ├── Post_processing.py ├── README.md ├── contact_matrix.py ├── exceptions.py ├── hicbin.py ├── jgi_summarize_bam_contig_depths ├── merge_bins.py ├── test ├── align_test.bam ├── checkm_test.csv ├── contig_assembly_test.fa ├── contig_info_test.csv ├── contig_tax_test.csv ├── coverage_test.txt └── must_contact_test.csv └── utils.py /Cluster.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dyxstat/HiCBin/HEAD/Cluster.py -------------------------------------------------------------------------------- /HiCBin_linux_env.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/dyxstat/HiCBin/HEAD/HiCBin_linux_env.yaml -------------------------------------------------------------------------------- /HiCBin_osx_env.yaml: 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