├── LICENSE ├── MbioAssy1.0 ├── 1_NST.R ├── 2_Neutral_model.R ├── 3_C-score-var.R ├── 4_Co-occurrence_network.R ├── 5_Random_network.R ├── MbioAssy1.0.R ├── Readme.md ├── example_input │ ├── AMB.sample.group.txt │ └── AMB.txt └── example_output │ ├── AMB.Network.gml │ ├── NST.output.txt │ ├── Network.global.topology.csv │ ├── Network.node.topology.csv │ ├── Neutral.model.details.txt │ ├── Neutral.model.plot.pdf │ ├── c-score-var.hist.500.emf │ └── c-score-var.summary.txt ├── MbioAssy2.0 ├── .Rhistory ├── 1_NST.R ├── 2_Neutral_model.R ├── 3_iCAMP_Assembly.R ├── 4_C-score-var.R ├── 5.1_Co-occurrence_network.R ├── 5.2_RMT_Co-occurrence_network.R ├── 6_Random_network.R ├── MbioAssy2.0.R ├── example_input │ ├── Env.txt │ ├── Group.txt │ ├── OTU.txt │ ├── Taxonomy.txt │ └── Tree.nwk └── example_output │ ├── 1_NST │ └── NST.output.txt │ ├── 2_Neutral_model │ ├── Neutral.model.details.txt │ └── Neutral.model.plot.pdf │ ├── 3_iCAMP │ ├── Test.BinContributeToProcess_EachGroup.csv │ ├── 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