├── .flake8 ├── .github └── workflows │ ├── docs.yml │ ├── linting.yml │ ├── pypi.yml │ └── test.yml ├── .gitignore ├── .isort.cfg ├── .pre-commit-config.yaml ├── LICENSE ├── MANIFEST.in ├── README.md ├── codecov.yml ├── docs └── source │ ├── api.rst │ ├── cite.md │ ├── conf.py │ ├── examples │ ├── 1-What metacognition looks like.ipynb │ ├── 1-What metacognition looks like.md │ ├── 2-Fitting the model-MLE.ipynb │ ├── 2-Fitting the model-MLE.md │ ├── 3-Comparison with the hmeta-d toolbox.ipynb │ ├── 3-Comparison with the hmeta-d toolbox.md │ ├── Example 1 - Fitting MLE - Subject and group level.ipynb │ ├── Example 1 - Fitting MLE - Subject and group level.md │ ├── Example 2 - Fitting Bayesian - Subject level (pymc).ipynb │ ├── Example 2 - Fitting Bayesian - Subject level (pymc).md │ ├── README.md │ └── hmetad │ │ ├── Bayes_metad_indiv_R.txt │ │ ├── example_metad_indiv.R │ │ └── metad_indiv.txt │ ├── images │ ├── AU.png │ ├── LabLogo.png │ ├── confidence_ROCAUC.png │ ├── logo.png │ ├── logo.svg │ ├── subjectLevel.png │ └── trace.png │ ├── index.ipynb │ ├── index.md │ ├── references.md │ ├── refs.bib │ └── tutorials.md ├── environment.yml ├── metadpy ├── __init__.py ├── bayesian.py ├── datasets │ ├── __init__.py │ └── rm.txt ├── mle.py ├── models │ └── subject_level_pymc.py ├── plotting.py ├── sdt.py ├── tests │ ├── __init__.py │ ├── test_bayesian.py │ ├── test_mle.py │ ├── test_plotting.py │ ├── test_sdt.py │ └── test_utils.py └── utils.py ├── requirements-docs.txt ├── requirements-tests.txt ├── requirements.txt └── setup.py /.flake8: -------------------------------------------------------------------------------- 1 | [flake8] 2 | max-line-length = 88 3 | extend-ignore = E203 -------------------------------------------------------------------------------- /.github/workflows/docs.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/embodied-computation-group/metadpy/HEAD/.github/workflows/docs.yml 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