├── .bumpversion.cfg ├── .gitignore ├── .pyup.yml ├── .travis.yml ├── LICENSE ├── MANIFEST.in ├── Makefile ├── README.md ├── environment-dev.yml ├── examples └── hiv │ ├── hiv1_homology_model.pdb │ └── make_graph.py ├── proteingraph ├── __init__.py ├── conversion.py ├── features.py ├── pin.py ├── resi_atoms.py ├── test_conversion.py ├── test_data │ └── 2VIU.pdb └── test_pin.py ├── requirements.txt └── setup.py /.bumpversion.cfg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ericmjl/protein-interaction-network/HEAD/.bumpversion.cfg -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ericmjl/protein-interaction-network/HEAD/.gitignore -------------------------------------------------------------------------------- /.pyup.yml: 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