├── .gitignore ├── LICENSE.txt ├── README.md ├── dhmc ├── __init__.py ├── dhmc.py ├── hmc.py ├── mcmc.py └── utils.py ├── environment.yaml ├── figures ├── dhmc.pdf ├── dhmc.png ├── hmc.pdf ├── hmc_mh_comparison.pdf └── hmc_progress.pdf └── notebooks ├── HMC.ipynb └── hmc_mh_comparison.pdf /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/LICENSE.txt -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/README.md -------------------------------------------------------------------------------- /dhmc/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /dhmc/dhmc.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/dhmc/dhmc.py -------------------------------------------------------------------------------- /dhmc/hmc.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/dhmc/hmc.py -------------------------------------------------------------------------------- /dhmc/mcmc.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/dhmc/mcmc.py -------------------------------------------------------------------------------- /dhmc/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/dhmc/utils.py -------------------------------------------------------------------------------- /environment.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/environment.yaml -------------------------------------------------------------------------------- /figures/dhmc.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/figures/dhmc.pdf -------------------------------------------------------------------------------- /figures/dhmc.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/figures/dhmc.png -------------------------------------------------------------------------------- /figures/hmc.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/figures/hmc.pdf -------------------------------------------------------------------------------- /figures/hmc_mh_comparison.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/figures/hmc_mh_comparison.pdf -------------------------------------------------------------------------------- /figures/hmc_progress.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/figures/hmc_progress.pdf -------------------------------------------------------------------------------- /notebooks/HMC.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/notebooks/HMC.ipynb -------------------------------------------------------------------------------- /notebooks/hmc_mh_comparison.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ethanluoyc/dhmc-jax/HEAD/notebooks/hmc_mh_comparison.pdf --------------------------------------------------------------------------------