├── .travis.yml ├── LICENSE ├── Makefile ├── README.md ├── bin ├── add-to-site.js ├── create-site.js ├── gaf2json.js ├── obo2json.js └── wtfgenes.js ├── cpp ├── Makefile ├── src │ ├── assocs.cpp │ ├── assocs.h │ ├── bernoulli.cpp │ ├── bernoulli.h │ ├── logger.cpp │ ├── logger.h │ ├── logsumexp.cpp │ ├── logsumexp.h │ ├── mcmc.cpp │ ├── mcmc.h │ ├── model.cpp │ ├── model.h │ ├── ontology.cpp │ ├── ontology.h │ ├── regexmacros.h │ ├── stacktrace.h │ ├── util.cpp │ ├── util.h │ └── vguard.h └── t │ └── wtfgenes.cpp ├── lib ├── assocs.js ├── benchmarker.js ├── bernoulli.js ├── converters.js ├── mcmc.js ├── model.js ├── ontology.js ├── parameterization.js ├── simulator.js └── util.js ├── package.json ├── test ├── assocs.js ├── bernoulli.js ├── data │ ├── drosophila │ │ └── Makefile │ ├── monster │ │ ├── assocs.json │ │ ├── humans.json │ │ ├── mutants.json │ │ ├── nonhumans.json │ │ ├── normals.json │ │ ├── ontology.json │ │ └── run.sh │ └── yeast │ │ ├── Makefile │ │ ├── cerevisiae-mating.json │ │ └── cerevisiae-mating.txt ├── mcmc.js ├── mocha.opts ├── model.js └── ontology.js └── web ├── Makefile ├── assets ├── css │ ├── basic.css │ ├── bootstrap.css │ ├── custom.css │ ├── font-awesome.css │ ├── jquery-ui.min.css │ └── jquery-ui.theme.min.css ├── fonts │ └── fontawesome-webfont.woff └── js │ ├── bootstrap.js │ ├── custom.js │ ├── jquery-1.12.2.min.js │ ├── jquery-ui.min.js │ ├── jquery.metisMenu.js │ ├── plotly-latest.min.js │ └── wtfgenes.js ├── client.js ├── datasets.json ├── index.html └── logo ├── wtfgenes.ai ├── wtfgenes.png └── wtfgenes.svg /.travis.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/evoldoers/wtfgenes/HEAD/.travis.yml -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/evoldoers/wtfgenes/HEAD/LICENSE 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