├── .eslintrc.js ├── .github └── workflows │ └── ci.yml ├── .gitignore ├── AUTHORS ├── LICENSE ├── README.md ├── api.md ├── babel.config.json ├── cli ├── batch-render.js └── ideo-cli.js ├── data ├── annotations │ ├── 10000_virtual_snvs.json │ ├── 1000_virtual_snvs.json │ ├── 100_virtual_snvs.json │ ├── 10_virtual_cnvs.json │ ├── 9_tracks_virtual_snvs.json │ ├── Homo_sapiens,_Ensembl_80.tsv │ ├── SRR562646.json │ ├── all_human_genes.json │ ├── chr1_span_virtual_cnvs.json │ ├── homo_sapiens-mus_musculus-synteny-v73.tsv │ ├── mouse_aging.json │ ├── oligodendroglioma_cnv_expression.json │ ├── span_heatmap_histogram_virtual.json │ └── yeast_issue_239.json └── bands │ ├── native │ ├── aedes-aegypti-lvpagwg.json │ ├── anopheles-albimanus.json │ ├── anopheles-atroparvus.json │ ├── anopheles-gambiae.json │ ├── arabidopsis-thaliana.json │ ├── aspergillus-fumigatus.json │ ├── aspergillus-nidulans.json │ ├── aspergillus-niger.json │ ├── aspergillus-oryzae.json │ ├── banana.json │ ├── bombyx-mandarina-gca003987935v1rs.json │ ├── brachypodium-distachyon-GCF_000005505.3.json │ ├── brachypodium-distachyon.json │ ├── caenorhabditis-elegans.json │ ├── canis-lupus-familiaris.json │ ├── capsicum-annuum.json │ ├── chlorocebus-sabaeus-GCF_000409795.2.json │ ├── chlorocebus-sabaeus.json │ ├── ciona-intestinalis-GCF_000224145.3.json │ ├── ciona-intestinalis.json │ ├── custom-json-no-extension │ ├── custom.json │ ├── customjsonnoextension │ ├── daphnia-magna-gca020631705v2.json │ ├── daphnia-pulex-gca021134715v1rs.json │ ├── dermatophagoides-pteronyssinus-gca001901225v2.json │ ├── diuraphis-noxia-gca001186385v1.json │ ├── drosophila-melanogaster.json │ ├── felis-catus-GCF_000181335.3.json │ ├── felis-catus.json │ ├── galendromus-occidentalis-gca000255335v2rs.json │ ├── galleria-mellonella-gca003640425v2rs.json │ ├── gallus-gallus-GCF_000002315.6.json │ ├── gallus-gallus.json │ ├── gorilla-gorilla-GCF_000151905.2.json │ ├── gorilla-gorilla.json │ ├── helicoverpa-armigera-gca023701775v1rs.json │ ├── hermetia-illucens-gca905115235v1.json │ ├── homarus-americanus-gca018991925v1.json │ ├── homo-sapiens-400.json │ ├── homo-sapiens-550.json │ ├── homo-sapiens-GCF_000001405.12-1200.json │ ├── homo-sapiens-GCF_000001405.12-400.json │ ├── homo-sapiens-GCF_000001405.12-550.json │ ├── homo-sapiens-GCF_000001405.12-850.json │ ├── homo-sapiens-GCF_000001405.12.json │ ├── homo-sapiens-GCF_000001405.13-550.json │ ├── homo-sapiens-GCF_000001405.13-850.json │ ├── homo-sapiens-GCF_000001405.13.json │ ├── homo-sapiens-GCF_000001405.26-400.json │ ├── homo-sapiens-GCF_000001405.26-550.json │ ├── homo-sapiens-GCF_000001405.26.json │ ├── homo-sapiens-GCF_000001405.38.json │ ├── homo-sapiens-GCF_000001405.40.json │ ├── homo-sapiens-GCF_000306695.2.json │ ├── homo-sapiens-GCF_009914755.1.json │ ├── homo-sapiens-no-bands.json │ ├── homo-sapiens.json │ ├── hordeum-vulgare.json │ ├── ideogram_10090_GCF_000000045.1_NA_V2.json │ ├── ideogram_10090_GCF_000000045.2_NA_V2.json │ ├── ideogram_10090_GCF_000000055.13_NA_V2.json │ ├── ideogram_10090_GCF_000000055.14_NA_V2.json │ ├── ideogram_10090_GCF_000000055.15_NA_V2.json │ ├── ideogram_10090_GCF_000000055.16_NA_V2.json │ ├── ideogram_10090_GCF_000000055.18_NA_V2.json │ ├── ideogram_10090_GCF_000000055.20_NA_V2.json │ ├── ideogram_10116_GCF_015227685.1_NA_V1.json │ ├── lytechinus-variegatus-gca018143015v1.json │ ├── macaca-fascicularis-GCF_000364345.1.json │ ├── macaca-fascicularis.json │ ├── macaca-mulatta-GCF_003339765.1.json │ ├── macaca-mulatta.json │ ├── mercenaria-mercenaria-gca014805675v2.json │ ├── metaseiulus-occidentalis-gca000255335v1.json │ ├── mus-musculus-GCF_000001635.20.json │ ├── mus-musculus-GCF_000001635.26.json │ ├── mus-musculus-GCF_000001635.27.json │ ├── mus-musculus-no-bands.json │ ├── mus-musculus.json │ ├── musa-acuminata.json │ ├── nomascus-leucogenys-GCF_000146795.2.json │ ├── nomascus-leucogenys.json │ ├── ornithorhynchus-anatinus-GCF_000002275.2.json │ ├── ornithorhynchus-anatinus.json │ ├── oryza-sativa.json │ ├── pan-paniscus-GCF_000258655.2.json │ ├── pan-paniscus.json │ ├── pan-troglodytes-GCF_002880755.1.json │ ├── pan-troglodytes.json │ ├── penaeus-vannamei-gca003789085v1.json │ ├── rattus-norvegicus-GCF_000001895.5.json │ ├── rattus-norvegicus.json │ ├── solanum-lycopersicum.json │ ├── triticum-aestivum-arinalrfor.json │ ├── triticum-aestivum-jagger.json │ ├── triticum-aestivum-julius.json │ ├── triticum-aestivum-lancer.json │ ├── triticum-aestivum-landmark.json │ ├── triticum-aestivum-mace.json │ ├── triticum-aestivum-mattis.json │ ├── triticum-aestivum-norin61.json │ ├── triticum-aestivum-stanley.json │ ├── triticum-aestivum.json │ ├── varroa-destructor-gca002443255.json │ ├── zea-mays-b73-v2-centromeres.tsv │ └── zea-mays.json │ ├── ncbi │ ├── arabidopsis-thaliana.tsv │ ├── banana.tsv │ ├── ideogram_10090_GCF_000000045.1_NA_V2.tsv │ ├── ideogram_10090_GCF_000000045.2_NA_V2.tsv │ ├── ideogram_10090_GCF_000000055.13_NA_V2.tsv │ ├── ideogram_10090_GCF_000000055.14_NA_V2.tsv │ ├── ideogram_10090_GCF_000000055.15_NA_V2.tsv │ ├── ideogram_10090_GCF_000000055.16_NA_V2.tsv │ ├── ideogram_10090_GCF_000000055.18_NA_V2.tsv │ ├── ideogram_10090_GCF_000000055.19_NA_V2.tsv │ ├── ideogram_10090_GCF_000000055.20_NA_V2.tsv │ ├── ideogram_10116_GCF_000000225.4_NA_V1.tsv │ ├── ideogram_10116_GCF_015227685.1_NA_V1.tsv │ ├── ideogram_9606_GCF_000001305.12_1200_V1.tsv │ ├── ideogram_9606_GCF_000001305.12_400_V1.tsv │ ├── ideogram_9606_GCF_000001305.12_550_V1.tsv │ ├── ideogram_9606_GCF_000001305.12_850_V1.tsv │ ├── ideogram_9606_GCF_000001305.13_550_V1.tsv │ ├── ideogram_9606_GCF_000001305.13_850_V1.tsv │ ├── ideogram_9606_GCF_000001305.14_400_V1.tsv │ ├── ideogram_9606_GCF_000001305.14_550_V1.tsv │ ├── ideogram_9606_GCF_000001305.14_850_V1.tsv │ └── ideogram_9606_GCF_009914755.1_850_V1.tsv │ └── ucsc │ ├── chr1_bands.tsv │ └── drosophila_melanogaster_dm6.tsv ├── dist ├── data │ ├── annotations │ │ ├── 10000_virtual_snvs.json │ │ ├── 1000_virtual_snvs.json │ │ ├── 100_virtual_snvs.json │ │ ├── 10_virtual_cnvs.json │ │ ├── 20_tracks_virtual_snvs.json │ │ ├── 9_tracks_virtual_snvs.json │ │ ├── Homo_sapiens,_Ensembl_80.tsv │ │ ├── SRR562646.json │ │ ├── all_human_genes.json │ │ ├── homo_sapiens-mus_musculus-synteny-v73.tsv │ │ ├── mouse_aging.json │ │ ├── oligodendroglioma_cnv_expression.json │ │ └── yeast_issue_239.json │ ├── bands │ │ ├── native │ │ │ ├── aedes-aegypti-lvpagwg.json │ │ │ ├── anopheles-albimanus.json │ │ │ ├── anopheles-atroparvus.json │ │ │ ├── anopheles-gambiae.json │ │ │ ├── arabidopsis-thaliana.json │ │ │ ├── aspergillus-fumigatus.json │ │ │ ├── aspergillus-nidulans.json │ │ │ ├── aspergillus-niger.json │ │ │ ├── aspergillus-oryzae.json │ │ │ ├── banana.json │ │ │ ├── bombyx-mandarina-gca003987935v1rs.json │ │ │ ├── brachypodium-distachyon-GCF_000005505.3.json │ │ │ ├── brachypodium-distachyon.json │ │ │ ├── caenorhabditis-elegans.json │ │ │ ├── canis-lupus-familiaris.json │ │ │ ├── capsicum-annuum.json │ │ │ ├── chlorocebus-sabaeus-GCF_000409795.2.json │ │ │ ├── chlorocebus-sabaeus.json │ │ │ ├── ciona-intestinalis-GCF_000224145.3.json │ │ │ ├── ciona-intestinalis.json │ │ │ ├── custom-json-no-extension │ │ │ ├── custom.json │ │ │ ├── customjsonnoextension │ │ │ ├── daphnia-magna-gca020631705v2.json │ │ │ ├── daphnia-pulex-gca021134715v1rs.json │ │ │ ├── dermatophagoides-pteronyssinus-gca001901225v2.json │ │ │ ├── diuraphis-noxia-gca001186385v1.json │ │ │ ├── drosophila-melanogaster.json │ │ │ ├── felis-catus-GCF_000181335.3.json │ │ │ ├── felis-catus.json │ │ │ ├── galendromus-occidentalis-gca000255335v2rs.json │ │ │ ├── galleria-mellonella-gca003640425v2rs.json │ │ │ ├── gallus-gallus-GCF_000002315.6.json │ │ │ ├── gallus-gallus.json │ │ │ ├── gorilla-gorilla-GCF_000151905.2.json │ │ │ ├── gorilla-gorilla.json │ │ │ ├── helicoverpa-armigera-gca023701775v1rs.json │ │ │ ├── hermetia-illucens-gca905115235v1.json │ │ │ ├── homarus-americanus-gca018991925v1.json │ │ │ ├── homo-sapiens-400.json │ │ │ ├── homo-sapiens-550.json │ │ │ ├── homo-sapiens-GCF_000001405.12-1200.json │ │ │ ├── homo-sapiens-GCF_000001405.12-400.json │ │ │ ├── homo-sapiens-GCF_000001405.12-550.json │ │ │ ├── homo-sapiens-GCF_000001405.12-850.json │ │ │ ├── homo-sapiens-GCF_000001405.12.json │ │ │ ├── homo-sapiens-GCF_000001405.13-550.json │ │ │ ├── homo-sapiens-GCF_000001405.13-850.json │ │ │ ├── homo-sapiens-GCF_000001405.13.json │ │ │ ├── homo-sapiens-GCF_000001405.26-400.json │ │ │ ├── homo-sapiens-GCF_000001405.26-550.json │ │ │ ├── homo-sapiens-GCF_000001405.26.json │ │ │ ├── homo-sapiens-GCF_000001405.38.json │ │ │ ├── homo-sapiens-GCF_000001405.40.json │ │ │ ├── homo-sapiens-GCF_000306695.2.json │ │ │ ├── homo-sapiens-GCF_009914755.1.json │ │ │ ├── homo-sapiens-no-bands.json │ │ │ ├── homo-sapiens.json │ │ │ ├── hordeum-vulgare.json │ │ │ ├── ideogram_10090_GCF_000000045.1_NA_V2.json │ │ │ ├── ideogram_10090_GCF_000000045.2_NA_V2.json │ │ │ ├── ideogram_10090_GCF_000000055.13_NA_V2.json │ │ │ ├── ideogram_10090_GCF_000000055.14_NA_V2.json │ │ │ ├── ideogram_10090_GCF_000000055.15_NA_V2.json │ │ │ ├── ideogram_10090_GCF_000000055.16_NA_V2.json │ │ │ ├── ideogram_10090_GCF_000000055.18_NA_V2.json │ │ │ ├── ideogram_10090_GCF_000000055.20_NA_V2.json │ │ │ ├── ideogram_10116_GCF_015227685.1_NA_V1.json │ │ │ ├── lytechinus-variegatus-gca018143015v1.json │ │ │ ├── macaca-fascicularis-GCF_000364345.1.json │ │ │ ├── macaca-fascicularis.json │ │ │ ├── macaca-mulatta-GCF_003339765.1.json │ │ │ ├── macaca-mulatta.json │ │ │ ├── mercenaria-mercenaria-gca014805675v2.json │ │ │ ├── metaseiulus-occidentalis-gca000255335v1.json │ │ │ ├── mus-musculus-GCF_000001635.20.json │ │ │ ├── mus-musculus-GCF_000001635.26.json │ │ │ ├── mus-musculus-GCF_000001635.27.json │ │ │ ├── mus-musculus-no-bands.json │ │ │ ├── mus-musculus.json │ │ │ ├── musa-acuminata.json │ │ │ ├── nomascus-leucogenys-GCF_000146795.2.json │ │ │ ├── nomascus-leucogenys.json │ │ │ ├── ornithorhynchus-anatinus-GCF_000002275.2.json │ │ │ ├── ornithorhynchus-anatinus.json │ │ │ ├── oryza-sativa.json │ │ │ ├── pan-paniscus-GCF_000258655.2.json │ │ │ ├── pan-paniscus.json │ │ │ ├── pan-troglodytes-GCF_002880755.1.json │ │ │ ├── pan-troglodytes.json │ │ │ ├── penaeus-vannamei-gca003789085v1.json │ │ │ ├── plasmodium-falciparum.json │ │ │ ├── rattus-norvegicus-GCF_000001895.5.json │ │ │ ├── rattus-norvegicus-no-bands.json │ │ │ ├── rattus-norvegicus.json │ │ │ ├── saccharomyces-cerevisiae.json │ │ │ ├── solanum-lycopersicum.json │ │ │ ├── sus-scrofa.json │ │ │ ├── triticum-aestivum-arinalrfor.json │ │ │ ├── triticum-aestivum-jagger.json │ │ │ ├── triticum-aestivum-julius.json │ │ │ ├── triticum-aestivum-lancer.json │ │ │ ├── triticum-aestivum-landmark.json │ │ │ ├── triticum-aestivum-mace.json │ │ │ ├── triticum-aestivum-mattis.json │ │ │ ├── triticum-aestivum-norin61.json │ │ │ ├── triticum-aestivum-stanley.json │ │ │ ├── triticum-aestivum.json │ │ │ ├── varroa-destructor-gca002443255.json │ │ │ ├── zea-mays-b73-v2-centromeres.tsv │ │ │ └── zea-mays.json │ │ ├── ncbi │ │ │ ├── arabidopsis-thaliana.tsv │ │ │ ├── banana.tsv │ │ │ ├── ideogram_10090_GCF_000000045.1_NA_V2.tsv │ │ │ ├── ideogram_10090_GCF_000000045.2_NA_V2.tsv │ │ │ ├── ideogram_10090_GCF_000000055.13_NA_V2.tsv │ │ │ ├── ideogram_10090_GCF_000000055.14_NA_V2.tsv │ │ │ ├── ideogram_10090_GCF_000000055.15_NA_V2.tsv │ │ │ ├── ideogram_10090_GCF_000000055.16_NA_V2.tsv │ │ │ ├── ideogram_10090_GCF_000000055.18_NA_V2.tsv │ │ │ ├── ideogram_10090_GCF_000000055.19_NA_V2.tsv │ │ │ ├── ideogram_10090_GCF_000000055.20_NA_V2.tsv │ │ │ ├── ideogram_10116_GCF_000000225.4_NA_V1.tsv │ │ │ ├── ideogram_10116_GCF_015227685.1_NA_V1.tsv │ │ │ ├── ideogram_9606_GCF_000001305.12_1200_V1.tsv │ │ │ ├── ideogram_9606_GCF_000001305.12_400_V1.tsv │ │ │ ├── ideogram_9606_GCF_000001305.12_550_V1.tsv │ │ │ ├── ideogram_9606_GCF_000001305.12_850_V1.tsv │ │ │ ├── ideogram_9606_GCF_000001305.13_550_V1.tsv │ │ │ ├── ideogram_9606_GCF_000001305.13_850_V1.tsv │ │ │ ├── ideogram_9606_GCF_000001305.14_400_V1.tsv │ │ │ ├── ideogram_9606_GCF_000001305.14_550_V1.tsv │ │ │ ├── ideogram_9606_GCF_000001305.14_850_V1.tsv │ │ │ └── ideogram_9606_GCF_009914755.1_850_V1.tsv │ │ └── ucsc │ │ │ ├── chr1_bands.tsv │ │ │ └── drosophila_melanogaster_dm6.tsv │ └── cache │ │ ├── gene-structures │ │ ├── homo-sapiens-gene-structures.tsv.gz │ │ └── mus-musculus-gene-structures.tsv.gz │ │ ├── genes │ │ ├── bos-taurus-genes.tsv.gz │ │ ├── caenorhabditis-elegans-genes.tsv.gz │ │ ├── canis-lupus-familiaris-genes.tsv.gz │ │ ├── danio-rerio-genes.tsv.gz │ │ ├── drosophila-melanogaster-genes.tsv.gz │ │ ├── equus-caballus-genes.tsv.gz │ │ ├── felis-catus-genes.tsv.gz │ │ ├── gallus-gallus-genes.tsv.gz │ │ ├── homo-sapiens-genes.tsv.gz │ │ ├── macaca-fascicularis-genes.tsv.gz │ │ ├── macaca-mulatta-genes.tsv.gz │ │ ├── mus-musculus-genes.tsv.gz │ │ ├── pan-troglodytes-genes.tsv.gz │ │ ├── rattus-norvegicus-genes.tsv.gz │ │ └── sus-scrofa-genes.tsv.gz │ │ ├── homo-sapiens-top-genes.tsv │ │ ├── interactions │ │ ├── bos-taurus-interactions.json.gz │ │ ├── danio-rerio-interactions.json.gz │ │ ├── drosophila-melanogaster-interactions.json.gz │ │ ├── equus-caballus-interactions.json.gz │ │ ├── gallus-gallus-interactions.json.gz │ │ ├── homo-sapiens-interactions.json.gz │ │ ├── mus-musculus-interactions.json.gz │ │ ├── pan-troglodytes-interactions.json.gz │ │ ├── rattus-norvegicus-interactions.json.gz │ │ └── sus-scrofa-interactions.json.gz │ │ ├── paralogs │ │ ├── bos-taurus-paralogs.tsv.gz │ │ ├── caenorhabditis-elegans-paralogs.tsv.gz │ │ ├── canis-familiaris-paralogs.tsv.gz │ │ ├── canis-lupus-familiaris-paralogs.tsv.gz │ │ ├── gallus-gallus-paralogs.tsv.gz │ │ ├── homo-sapiens-paralogs.tsv.gz │ │ ├── macaca-fascicularis-paralogs.tsv.gz │ │ ├── macaca-mulatta-paralogs.tsv.gz │ │ ├── mus-musculus-paralogs.tsv.gz │ │ ├── rattus-norvegicus-paralogs.tsv.gz │ │ └── sus-scrofa-paralogs.tsv.gz │ │ ├── proteins │ │ ├── homo-sapiens-proteins.tsv.gz │ │ └── mus-musculus-proteins.tsv.gz │ │ ├── synonyms │ │ ├── bos-taurus-synonyms.tsv.gz │ │ ├── caenorhabditis-elegans-synonyms.tsv.gz │ │ ├── canis-lupus-familiaris-synonyms.tsv.gz │ │ ├── danio-rerio-synonyms.tsv.gz │ │ ├── drosophila-melanogaster-synonyms.tsv.gz │ │ ├── equus-caballus-synonyms.tsv.gz │ │ ├── felis-catus-synonyms.tsv.gz │ │ ├── gallus-gallus-synonyms.tsv.gz │ │ ├── homo-sapiens-synonyms.tsv.gz │ │ ├── macaca-fascicularis-synonyms.tsv.gz │ │ ├── macaca-mulatta-synonyms.tsv.gz │ │ ├── mus-musculus-synonyms.tsv.gz │ │ ├── pan-troglodytes-synonyms.tsv.gz │ │ ├── rattus-norvegicus-synonyms.tsv.gz │ │ └── sus-scrofa-synonyms.tsv.gz │ │ ├── tissues │ │ ├── homo-sapiens-tissues.tsv.gz │ │ └── homo-sapiens-tissues.tsv.li.gz │ │ └── variants │ │ ├── homo-sapiens-variants.tsv.gz │ │ └── homo-sapiens-variants.tsv.li.gz └── js │ ├── ideogram.min.js │ ├── ideogram.min.js.LICENSE.txt │ └── ideogram.min.js.map ├── docs ├── annotations.md ├── native_annotation_formats.md └── search_ideogram.md ├── examples ├── angular │ ├── .angular-cli.json │ ├── .editorconfig │ ├── .gitignore │ ├── README.md │ ├── e2e │ │ ├── app.e2e-spec.ts │ │ ├── app.po.ts │ │ └── tsconfig.e2e.json │ ├── ideogram_angular_example.png │ ├── karma.conf.js │ ├── package-lock.json │ ├── package.json │ ├── protractor.conf.js │ ├── src │ │ ├── app │ │ │ ├── app.component.css │ │ │ ├── app.component.html │ │ │ ├── app.component.spec.ts │ │ │ ├── app.component.ts │ │ │ ├── app.module.ts │ │ │ └── ideogram │ │ │ │ ├── ideogram.component.css │ │ │ │ ├── ideogram.component.html │ │ │ │ ├── ideogram.component.spec.ts │ │ │ │ └── ideogram.component.ts │ │ ├── assets │ │ │ └── .gitkeep │ │ ├── environments │ │ │ ├── environment.prod.ts │ │ │ └── environment.ts │ │ ├── favicon.ico │ │ ├── index.html │ │ ├── main.ts │ │ ├── polyfills.ts │ │ ├── styles.css │ │ ├── test.ts │ │ ├── tsconfig.app.json │ │ ├── tsconfig.spec.json │ │ └── typings.d.ts │ ├── tsconfig.json │ └── tslint.json ├── index.html ├── jupyter │ ├── README.md │ ├── ideogram.ipynb │ └── ideogram_jupyter_example.png ├── r │ └── README.md ├── react │ ├── .env │ ├── .gitignore │ ├── README.md │ ├── ideogram_react_example.png │ ├── package-lock.json │ ├── package.json │ ├── public │ │ ├── favicon.ico │ │ ├── index.html │ │ └── manifest.json │ └── src │ │ ├── App.css │ │ ├── App.js │ │ ├── App.test.js │ │ ├── index.css │ │ ├── index.js │ │ ├── logo.svg │ │ └── registerServiceWorker.js ├── vanilla │ ├── ancestry-tracks.html │ ├── ancestry.html │ ├── annotations-animated.html │ ├── annotations-basic.html │ ├── annotations-colored-arms.html │ ├── annotations-external-data.html │ ├── annotations-file-url.html │ ├── annotations-heatmap-2d.html │ ├── annotations-heatmap.html │ ├── annotations-histogram.html │ ├── annotations-overlaid.html │ ├── annotations-span-heatmap-histogram.html │ ├── annotations-span.html │ ├── annotations-track-filters.html │ ├── annotations-tracks.html │ ├── auth.html │ ├── brush.html │ ├── collinear-tabs.html │ ├── color-chromosomes.html │ ├── comparative-genomics.html │ ├── compare-whole-genomes.html │ ├── create-custom.html │ ├── cursor.html │ ├── custom-organism.html │ ├── differential-expression.html │ ├── eukaryotes.html │ ├── gene-leads-example-style.css │ ├── gene-leads-example-utils.js │ ├── gene-leads-lite.html │ ├── gene-leads.html │ ├── genome-alignment.html │ ├── geometry-collinear.html │ ├── highlights-basic.html │ ├── highlights-groups.html │ ├── homology-advanced.html │ ├── homology-basic.html │ ├── homology-chimpanzee-gorilla.html │ ├── homology-grape-tomato.html │ ├── homology-human-chimpanzee-single.html │ ├── homology-human-chimpanzee.html │ ├── homology-human-fly.html │ ├── homology-human-grape-single.html │ ├── homology-human-grape.html │ ├── homology-human-plant-single.html │ ├── homology-human-worm-single.html │ ├── homology-human-worm.html │ ├── homology-interspecies.html │ ├── human.html │ ├── ideogram_histogram_all_human_genes.png │ ├── img │ │ ├── annotations_animated_ideogram.png │ │ ├── annotations_basic_ideogram.png │ │ ├── annotations_external_data_ideogram.png │ │ ├── annotations_file_url_ideogram.png │ │ ├── annotations_heatmap_ideogram.png │ │ ├── annotations_histogram_ideogram.png │ │ ├── annotations_overlaid_ideogram.png │ │ ├── annotations_span_heatmap_histogram_ideogram.png │ │ ├── annotations_span_ideogram.png │ │ ├── annotations_tracks_ideogram.png │ │ ├── brush_ideogram.png │ │ ├── color_chromosomes_ideogram.png │ │ ├── cursor_ideogram.png │ │ ├── differential_expression_ideogram.png │ │ ├── eukaryotes_ideogram.png │ │ ├── gene_leads_ideogram.png │ │ ├── genome_alignment_ideogram.png │ │ ├── geometry_collinear_ideogram.png │ │ ├── highlights_basic_ideogram.png │ │ ├── highlights_groups_ideogram.png │ │ ├── homology_advanced_ideogram.png │ │ ├── homology_basic_ideogram.png │ │ ├── homology_interspecies_ideogram.png │ │ ├── human_ideogram.png │ │ ├── ideogram_favicon.ico │ │ ├── layout_small_ideogram.png │ │ ├── layout_tabs_ideogram.png │ │ ├── mouse_ideogram.png │ │ ├── multiple_primates_ideogram.png │ │ ├── multiple_trio_ideogram.png │ │ ├── orthologs_ideogram.png │ │ ├── ploidy_basic_ideogram.png │ │ ├── ploidy_rearrangements_ideogram.png │ │ └── ploidy_recombination_ideogram.png │ ├── index.html │ ├── layout-small.html │ ├── layout-tabs.html │ ├── mouse.html │ ├── multiple-primates.html │ ├── multiple-trio-sv.html │ ├── multiple-trio.html │ ├── orthologs.html │ ├── paralogs.html │ ├── ploidy-basic.html │ ├── ploidy-rearrangements.html │ ├── ploidy-recombination.html │ ├── related-genes.html │ └── yeast-histogram.html └── vue │ ├── .babelrc │ ├── .editorconfig │ ├── .eslintignore │ ├── .eslintrc.js │ ├── .gitignore │ ├── .postcssrc.js │ ├── README.md │ ├── build │ ├── build.js │ ├── check-versions.js │ ├── logo.png │ ├── utils.js │ ├── vue-loader.conf.js │ ├── webpack.base.conf.js │ ├── webpack.dev.conf.js │ ├── webpack.prod.conf.js │ └── webpack.test.conf.js │ ├── config │ ├── dev.env.js │ ├── index.js │ ├── prod.env.js │ └── test.env.js │ ├── ideogram_vue_example.png │ ├── index.html │ ├── package-lock.json │ ├── package.json │ ├── src │ ├── App.vue │ ├── assets │ │ └── logo.png │ ├── components │ │ └── Ideogram.vue │ ├── main.js │ └── router │ │ └── index.js │ ├── static │ └── .gitkeep │ └── test │ └── unit │ ├── .eslintrc │ ├── index.js │ ├── karma.conf.js │ └── specs │ └── HelloWorld.spec.js ├── karma.conf.js ├── package.json ├── scripts ├── js │ └── prepublish.js └── python │ ├── __init__.py │ ├── analyze_ancestrydna.py │ ├── cache │ ├── __init__.py │ ├── compress_transcripts.py │ ├── gene_cache.py │ ├── gene_structure_cache.py │ ├── pfam_unintegrated.tsv │ ├── protein_cache.py │ ├── synonym_cache.py │ ├── tissue_cache.py │ └── variant_cache.py │ ├── convert_biomart_to_annots.py │ ├── convert_gvf_to_annots.py │ ├── create_annots.py │ ├── fetch_chromosomes │ ├── __init__.py │ ├── centromeres.py │ ├── convert_band_data.py │ ├── ensembl.py │ ├── fetch_cytobands_from_dbs.py │ ├── genomaize.py │ ├── settings.py │ ├── ucsc.py │ └── utils.py │ ├── get_chromosomes.py │ ├── lib.py │ ├── list_assemblies.py │ ├── requirements.txt │ └── tests │ └── test_gene_cache.py ├── src └── js │ ├── annotations │ ├── annotations.js │ ├── download.js │ ├── draw.js │ ├── events.js │ ├── filter.js │ ├── heatmap-2d.js │ ├── heatmap-collinear-vertical.js │ ├── heatmap-collinear.js │ ├── heatmap-lib.js │ ├── heatmap.js │ ├── highlight.js │ ├── histogram.js │ ├── labels.js │ ├── legend.js │ ├── process.js │ ├── synteny-collinear-horizontal.js │ ├── synteny-collinear.js │ ├── synteny-lib.js │ ├── synteny.js │ ├── track-labels-collinear.js │ └── track-labels.js │ ├── assembly-manifest.js │ ├── bands │ ├── bands.js │ ├── draw.js │ ├── fetch.js │ ├── parse.js │ ├── show.js │ └── styles.js │ ├── brush.js │ ├── collinear-vertical.js │ ├── collinear.js │ ├── color.js │ ├── coordinate-converters.js │ ├── cursor.js │ ├── filter.js │ ├── ideogram.js │ ├── index.js │ ├── init │ ├── caches │ │ ├── cache-lib.js │ │ ├── cache.js │ │ ├── gene-cache-worker.js │ │ ├── gene-structure-cache-worker.js │ │ ├── interaction-cache-worker.js │ │ ├── paralog-cache-worker.js │ │ ├── protein-cache-worker.js │ │ ├── synonym-cache-worker.js │ │ ├── tissue-cache-worker.js │ │ └── variant-cache-worker.js │ ├── configure.js │ ├── finish-init.js │ ├── init.js │ ├── organism-metadata.js │ └── write-container.js │ ├── kit │ ├── analyze-related-genes.js │ ├── gene-structure.js │ ├── pathway-viewer.js │ ├── protein-color.js │ ├── protein.js │ ├── related-genes.js │ ├── tippy-styles.js │ ├── tissue.js │ ├── variant.js │ └── wikipathways.js │ ├── layouts │ ├── horizontal-layout.js │ ├── layout-adapter.js │ ├── layout.js │ ├── paired-layout.js │ ├── small-layout.js │ └── vertical-layout.js │ ├── lib.js │ ├── model-adapter.js │ ├── model-no-bands-adapter.js │ ├── parsers │ ├── bed-parser.js │ ├── expression-matrix-parser.js │ └── tsv-parser.js │ ├── ploidy.js │ ├── range.js │ ├── services │ ├── eutils-config.js │ ├── organisms.js │ └── services.js │ ├── sex-chromosomes.js │ ├── tools │ ├── settings-ui.js │ ├── settings.js │ └── tools.js │ ├── version.js │ └── views │ ├── chromosome-labels.js │ ├── chromosome-model.js │ ├── chromosome-util.js │ ├── chromosome.js │ ├── draw-chromosomes.js │ ├── metacentric-chromosome.js │ └── telocentric-chromosome.js ├── test ├── cli-runner.html ├── cli-test.js ├── offline │ ├── annotation-labels.test.js │ ├── brush.test.js │ ├── collinear.test.js │ ├── color.test.js │ ├── core.test.js │ ├── filter.test.js │ ├── gene-structure.test.js │ ├── heatmap.test.js │ ├── highlight.test.js │ ├── histogram.test.js │ ├── ploidy.test.js │ ├── synteny.test.js │ ├── tissue.test.js │ ├── toggle.test.js │ └── tools.test.js └── online │ ├── annotation.test.js │ ├── custom-organism.test.js │ ├── ncbi.test.js │ ├── pathway-diagrams.test.js │ └── related-genes.test.js └── webpack.config.js /.eslintrc.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/.eslintrc.js -------------------------------------------------------------------------------- /.github/workflows/ci.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/.github/workflows/ci.yml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/.gitignore -------------------------------------------------------------------------------- /AUTHORS: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/AUTHORS -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/README.md -------------------------------------------------------------------------------- /api.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/api.md -------------------------------------------------------------------------------- /babel.config.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/babel.config.json -------------------------------------------------------------------------------- /cli/batch-render.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/cli/batch-render.js -------------------------------------------------------------------------------- /cli/ideo-cli.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/cli/ideo-cli.js -------------------------------------------------------------------------------- /data/annotations/10000_virtual_snvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/10000_virtual_snvs.json -------------------------------------------------------------------------------- /data/annotations/1000_virtual_snvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/1000_virtual_snvs.json -------------------------------------------------------------------------------- /data/annotations/100_virtual_snvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/100_virtual_snvs.json -------------------------------------------------------------------------------- /data/annotations/10_virtual_cnvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/10_virtual_cnvs.json -------------------------------------------------------------------------------- /data/annotations/9_tracks_virtual_snvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/9_tracks_virtual_snvs.json -------------------------------------------------------------------------------- /data/annotations/Homo_sapiens,_Ensembl_80.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/Homo_sapiens,_Ensembl_80.tsv -------------------------------------------------------------------------------- /data/annotations/SRR562646.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/SRR562646.json -------------------------------------------------------------------------------- /data/annotations/all_human_genes.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/all_human_genes.json -------------------------------------------------------------------------------- /data/annotations/chr1_span_virtual_cnvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/chr1_span_virtual_cnvs.json -------------------------------------------------------------------------------- /data/annotations/homo_sapiens-mus_musculus-synteny-v73.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/homo_sapiens-mus_musculus-synteny-v73.tsv -------------------------------------------------------------------------------- /data/annotations/mouse_aging.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/mouse_aging.json -------------------------------------------------------------------------------- /data/annotations/oligodendroglioma_cnv_expression.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/oligodendroglioma_cnv_expression.json -------------------------------------------------------------------------------- /data/annotations/span_heatmap_histogram_virtual.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/span_heatmap_histogram_virtual.json -------------------------------------------------------------------------------- /data/annotations/yeast_issue_239.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/annotations/yeast_issue_239.json -------------------------------------------------------------------------------- /data/bands/native/aedes-aegypti-lvpagwg.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/aedes-aegypti-lvpagwg.json -------------------------------------------------------------------------------- /data/bands/native/anopheles-albimanus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/anopheles-albimanus.json -------------------------------------------------------------------------------- /data/bands/native/anopheles-atroparvus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/anopheles-atroparvus.json -------------------------------------------------------------------------------- /data/bands/native/anopheles-gambiae.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/anopheles-gambiae.json -------------------------------------------------------------------------------- /data/bands/native/arabidopsis-thaliana.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/arabidopsis-thaliana.json -------------------------------------------------------------------------------- /data/bands/native/aspergillus-fumigatus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/aspergillus-fumigatus.json -------------------------------------------------------------------------------- /data/bands/native/aspergillus-nidulans.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/aspergillus-nidulans.json -------------------------------------------------------------------------------- /data/bands/native/aspergillus-niger.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/aspergillus-niger.json -------------------------------------------------------------------------------- /data/bands/native/aspergillus-oryzae.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/aspergillus-oryzae.json -------------------------------------------------------------------------------- /data/bands/native/banana.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/banana.json -------------------------------------------------------------------------------- /data/bands/native/bombyx-mandarina-gca003987935v1rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/brachypodium-distachyon-GCF_000005505.3.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/brachypodium-distachyon-GCF_000005505.3.json -------------------------------------------------------------------------------- /data/bands/native/brachypodium-distachyon.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/brachypodium-distachyon.json -------------------------------------------------------------------------------- /data/bands/native/caenorhabditis-elegans.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/caenorhabditis-elegans.json -------------------------------------------------------------------------------- /data/bands/native/canis-lupus-familiaris.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/canis-lupus-familiaris.json -------------------------------------------------------------------------------- /data/bands/native/capsicum-annuum.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/capsicum-annuum.json -------------------------------------------------------------------------------- /data/bands/native/chlorocebus-sabaeus-GCF_000409795.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/chlorocebus-sabaeus-GCF_000409795.2.json -------------------------------------------------------------------------------- /data/bands/native/chlorocebus-sabaeus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/chlorocebus-sabaeus.json -------------------------------------------------------------------------------- /data/bands/native/ciona-intestinalis-GCF_000224145.3.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ciona-intestinalis-GCF_000224145.3.json -------------------------------------------------------------------------------- /data/bands/native/ciona-intestinalis.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ciona-intestinalis.json -------------------------------------------------------------------------------- /data/bands/native/custom-json-no-extension: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/custom-json-no-extension -------------------------------------------------------------------------------- /data/bands/native/custom.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/custom.json -------------------------------------------------------------------------------- /data/bands/native/customjsonnoextension: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/customjsonnoextension -------------------------------------------------------------------------------- /data/bands/native/daphnia-magna-gca020631705v2.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/daphnia-pulex-gca021134715v1rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/dermatophagoides-pteronyssinus-gca001901225v2.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/diuraphis-noxia-gca001186385v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/drosophila-melanogaster.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/drosophila-melanogaster.json -------------------------------------------------------------------------------- /data/bands/native/felis-catus-GCF_000181335.3.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/felis-catus-GCF_000181335.3.json -------------------------------------------------------------------------------- /data/bands/native/felis-catus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/felis-catus.json -------------------------------------------------------------------------------- /data/bands/native/galendromus-occidentalis-gca000255335v2rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/galleria-mellonella-gca003640425v2rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/gallus-gallus-GCF_000002315.6.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/gallus-gallus-GCF_000002315.6.json -------------------------------------------------------------------------------- /data/bands/native/gallus-gallus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/gallus-gallus.json -------------------------------------------------------------------------------- /data/bands/native/gorilla-gorilla-GCF_000151905.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/gorilla-gorilla-GCF_000151905.2.json -------------------------------------------------------------------------------- /data/bands/native/gorilla-gorilla.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/gorilla-gorilla.json -------------------------------------------------------------------------------- /data/bands/native/helicoverpa-armigera-gca023701775v1rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/hermetia-illucens-gca905115235v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/homarus-americanus-gca018991925v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-400.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-400.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-550.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-550.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.12-1200.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.12-1200.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.12-400.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.12-400.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.12-550.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.12-550.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.12-850.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.12-850.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.12.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.12.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.13-550.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.13-550.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.13-850.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.13-850.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.13.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.13.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.26-400.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.26-400.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.26-550.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.26-550.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.26.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.26.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.38.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.38.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000001405.40.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000001405.40.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_000306695.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_000306695.2.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-GCF_009914755.1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-GCF_009914755.1.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens-no-bands.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens-no-bands.json -------------------------------------------------------------------------------- /data/bands/native/homo-sapiens.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/homo-sapiens.json -------------------------------------------------------------------------------- /data/bands/native/hordeum-vulgare.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/hordeum-vulgare.json -------------------------------------------------------------------------------- /data/bands/native/ideogram_10090_GCF_000000045.1_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ideogram_10090_GCF_000000045.1_NA_V2.json -------------------------------------------------------------------------------- /data/bands/native/ideogram_10090_GCF_000000045.2_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ideogram_10090_GCF_000000045.2_NA_V2.json -------------------------------------------------------------------------------- /data/bands/native/ideogram_10090_GCF_000000055.13_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ideogram_10090_GCF_000000055.13_NA_V2.json -------------------------------------------------------------------------------- /data/bands/native/ideogram_10090_GCF_000000055.14_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ideogram_10090_GCF_000000055.14_NA_V2.json -------------------------------------------------------------------------------- /data/bands/native/ideogram_10090_GCF_000000055.15_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ideogram_10090_GCF_000000055.15_NA_V2.json -------------------------------------------------------------------------------- /data/bands/native/ideogram_10090_GCF_000000055.16_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ideogram_10090_GCF_000000055.16_NA_V2.json -------------------------------------------------------------------------------- /data/bands/native/ideogram_10090_GCF_000000055.18_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ideogram_10090_GCF_000000055.18_NA_V2.json -------------------------------------------------------------------------------- /data/bands/native/ideogram_10090_GCF_000000055.20_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ideogram_10090_GCF_000000055.20_NA_V2.json -------------------------------------------------------------------------------- /data/bands/native/ideogram_10116_GCF_015227685.1_NA_V1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ideogram_10116_GCF_015227685.1_NA_V1.json -------------------------------------------------------------------------------- /data/bands/native/lytechinus-variegatus-gca018143015v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/macaca-fascicularis-GCF_000364345.1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/macaca-fascicularis-GCF_000364345.1.json -------------------------------------------------------------------------------- /data/bands/native/macaca-fascicularis.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/macaca-fascicularis.json -------------------------------------------------------------------------------- /data/bands/native/macaca-mulatta-GCF_003339765.1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/macaca-mulatta-GCF_003339765.1.json -------------------------------------------------------------------------------- /data/bands/native/macaca-mulatta.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/macaca-mulatta.json -------------------------------------------------------------------------------- /data/bands/native/mercenaria-mercenaria-gca014805675v2.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/metaseiulus-occidentalis-gca000255335v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/mus-musculus-GCF_000001635.20.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/mus-musculus-GCF_000001635.20.json -------------------------------------------------------------------------------- /data/bands/native/mus-musculus-GCF_000001635.26.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/mus-musculus-GCF_000001635.26.json -------------------------------------------------------------------------------- /data/bands/native/mus-musculus-GCF_000001635.27.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/mus-musculus-GCF_000001635.27.json -------------------------------------------------------------------------------- /data/bands/native/mus-musculus-no-bands.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/mus-musculus-no-bands.json -------------------------------------------------------------------------------- /data/bands/native/mus-musculus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/mus-musculus.json -------------------------------------------------------------------------------- /data/bands/native/musa-acuminata.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/musa-acuminata.json -------------------------------------------------------------------------------- /data/bands/native/nomascus-leucogenys-GCF_000146795.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/nomascus-leucogenys-GCF_000146795.2.json -------------------------------------------------------------------------------- /data/bands/native/nomascus-leucogenys.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/nomascus-leucogenys.json -------------------------------------------------------------------------------- /data/bands/native/ornithorhynchus-anatinus-GCF_000002275.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ornithorhynchus-anatinus-GCF_000002275.2.json -------------------------------------------------------------------------------- /data/bands/native/ornithorhynchus-anatinus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/ornithorhynchus-anatinus.json -------------------------------------------------------------------------------- /data/bands/native/oryza-sativa.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/oryza-sativa.json -------------------------------------------------------------------------------- /data/bands/native/pan-paniscus-GCF_000258655.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/pan-paniscus-GCF_000258655.2.json -------------------------------------------------------------------------------- /data/bands/native/pan-paniscus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/pan-paniscus.json -------------------------------------------------------------------------------- /data/bands/native/pan-troglodytes-GCF_002880755.1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/pan-troglodytes-GCF_002880755.1.json -------------------------------------------------------------------------------- /data/bands/native/pan-troglodytes.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/pan-troglodytes.json -------------------------------------------------------------------------------- /data/bands/native/penaeus-vannamei-gca003789085v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/rattus-norvegicus-GCF_000001895.5.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/rattus-norvegicus-GCF_000001895.5.json -------------------------------------------------------------------------------- /data/bands/native/rattus-norvegicus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/rattus-norvegicus.json -------------------------------------------------------------------------------- /data/bands/native/solanum-lycopersicum.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/solanum-lycopersicum.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum-arinalrfor.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum-arinalrfor.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum-jagger.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum-jagger.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum-julius.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum-julius.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum-lancer.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum-lancer.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum-landmark.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum-landmark.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum-mace.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum-mace.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum-mattis.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum-mattis.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum-norin61.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum-norin61.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum-stanley.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum-stanley.json -------------------------------------------------------------------------------- /data/bands/native/triticum-aestivum.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/triticum-aestivum.json -------------------------------------------------------------------------------- /data/bands/native/varroa-destructor-gca002443255.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /data/bands/native/zea-mays-b73-v2-centromeres.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/zea-mays-b73-v2-centromeres.tsv -------------------------------------------------------------------------------- /data/bands/native/zea-mays.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/native/zea-mays.json -------------------------------------------------------------------------------- /data/bands/ncbi/arabidopsis-thaliana.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/arabidopsis-thaliana.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/banana.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/banana.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10090_GCF_000000045.1_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10090_GCF_000000045.1_NA_V2.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10090_GCF_000000045.2_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10090_GCF_000000045.2_NA_V2.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10090_GCF_000000055.13_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10090_GCF_000000055.13_NA_V2.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10090_GCF_000000055.14_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10090_GCF_000000055.14_NA_V2.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10090_GCF_000000055.15_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10090_GCF_000000055.15_NA_V2.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10090_GCF_000000055.16_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10090_GCF_000000055.16_NA_V2.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10090_GCF_000000055.18_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10090_GCF_000000055.18_NA_V2.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10090_GCF_000000055.19_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10090_GCF_000000055.19_NA_V2.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10090_GCF_000000055.20_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10090_GCF_000000055.20_NA_V2.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10116_GCF_000000225.4_NA_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10116_GCF_000000225.4_NA_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_10116_GCF_015227685.1_NA_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_10116_GCF_015227685.1_NA_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_000001305.12_1200_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_000001305.12_1200_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_000001305.12_400_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_000001305.12_400_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_000001305.12_550_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_000001305.12_550_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_000001305.12_850_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_000001305.12_850_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_000001305.13_550_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_000001305.13_550_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_000001305.13_850_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_000001305.13_850_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_000001305.14_400_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_000001305.14_400_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_000001305.14_550_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_000001305.14_550_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_000001305.14_850_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_000001305.14_850_V1.tsv -------------------------------------------------------------------------------- /data/bands/ncbi/ideogram_9606_GCF_009914755.1_850_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ncbi/ideogram_9606_GCF_009914755.1_850_V1.tsv -------------------------------------------------------------------------------- /data/bands/ucsc/chr1_bands.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ucsc/chr1_bands.tsv -------------------------------------------------------------------------------- /data/bands/ucsc/drosophila_melanogaster_dm6.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/data/bands/ucsc/drosophila_melanogaster_dm6.tsv -------------------------------------------------------------------------------- /dist/data/annotations/10000_virtual_snvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/10000_virtual_snvs.json -------------------------------------------------------------------------------- /dist/data/annotations/1000_virtual_snvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/1000_virtual_snvs.json -------------------------------------------------------------------------------- /dist/data/annotations/100_virtual_snvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/100_virtual_snvs.json -------------------------------------------------------------------------------- /dist/data/annotations/10_virtual_cnvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/10_virtual_cnvs.json -------------------------------------------------------------------------------- /dist/data/annotations/20_tracks_virtual_snvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/20_tracks_virtual_snvs.json -------------------------------------------------------------------------------- /dist/data/annotations/9_tracks_virtual_snvs.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/9_tracks_virtual_snvs.json -------------------------------------------------------------------------------- /dist/data/annotations/Homo_sapiens,_Ensembl_80.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/Homo_sapiens,_Ensembl_80.tsv -------------------------------------------------------------------------------- /dist/data/annotations/SRR562646.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/SRR562646.json -------------------------------------------------------------------------------- /dist/data/annotations/all_human_genes.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/all_human_genes.json -------------------------------------------------------------------------------- /dist/data/annotations/homo_sapiens-mus_musculus-synteny-v73.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/homo_sapiens-mus_musculus-synteny-v73.tsv -------------------------------------------------------------------------------- /dist/data/annotations/mouse_aging.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/mouse_aging.json -------------------------------------------------------------------------------- /dist/data/annotations/oligodendroglioma_cnv_expression.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/oligodendroglioma_cnv_expression.json -------------------------------------------------------------------------------- /dist/data/annotations/yeast_issue_239.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/annotations/yeast_issue_239.json -------------------------------------------------------------------------------- /dist/data/bands/native/aedes-aegypti-lvpagwg.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/aedes-aegypti-lvpagwg.json -------------------------------------------------------------------------------- /dist/data/bands/native/anopheles-albimanus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/anopheles-albimanus.json -------------------------------------------------------------------------------- /dist/data/bands/native/anopheles-atroparvus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/anopheles-atroparvus.json -------------------------------------------------------------------------------- /dist/data/bands/native/anopheles-gambiae.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/anopheles-gambiae.json -------------------------------------------------------------------------------- /dist/data/bands/native/arabidopsis-thaliana.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/arabidopsis-thaliana.json -------------------------------------------------------------------------------- /dist/data/bands/native/aspergillus-fumigatus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/aspergillus-fumigatus.json -------------------------------------------------------------------------------- /dist/data/bands/native/aspergillus-nidulans.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/aspergillus-nidulans.json -------------------------------------------------------------------------------- /dist/data/bands/native/aspergillus-niger.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/aspergillus-niger.json -------------------------------------------------------------------------------- /dist/data/bands/native/aspergillus-oryzae.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/aspergillus-oryzae.json -------------------------------------------------------------------------------- /dist/data/bands/native/banana.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/banana.json -------------------------------------------------------------------------------- /dist/data/bands/native/bombyx-mandarina-gca003987935v1rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/brachypodium-distachyon-GCF_000005505.3.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/brachypodium-distachyon-GCF_000005505.3.json -------------------------------------------------------------------------------- /dist/data/bands/native/brachypodium-distachyon.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/brachypodium-distachyon.json -------------------------------------------------------------------------------- /dist/data/bands/native/caenorhabditis-elegans.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/caenorhabditis-elegans.json -------------------------------------------------------------------------------- /dist/data/bands/native/canis-lupus-familiaris.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/canis-lupus-familiaris.json -------------------------------------------------------------------------------- /dist/data/bands/native/capsicum-annuum.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/capsicum-annuum.json -------------------------------------------------------------------------------- /dist/data/bands/native/chlorocebus-sabaeus-GCF_000409795.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/chlorocebus-sabaeus-GCF_000409795.2.json -------------------------------------------------------------------------------- /dist/data/bands/native/chlorocebus-sabaeus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/chlorocebus-sabaeus.json -------------------------------------------------------------------------------- /dist/data/bands/native/ciona-intestinalis-GCF_000224145.3.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ciona-intestinalis-GCF_000224145.3.json -------------------------------------------------------------------------------- /dist/data/bands/native/ciona-intestinalis.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ciona-intestinalis.json -------------------------------------------------------------------------------- /dist/data/bands/native/custom-json-no-extension: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/custom-json-no-extension -------------------------------------------------------------------------------- /dist/data/bands/native/custom.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/custom.json -------------------------------------------------------------------------------- /dist/data/bands/native/customjsonnoextension: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/customjsonnoextension -------------------------------------------------------------------------------- /dist/data/bands/native/daphnia-magna-gca020631705v2.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/daphnia-pulex-gca021134715v1rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/dermatophagoides-pteronyssinus-gca001901225v2.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/diuraphis-noxia-gca001186385v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/drosophila-melanogaster.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/drosophila-melanogaster.json -------------------------------------------------------------------------------- /dist/data/bands/native/felis-catus-GCF_000181335.3.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/felis-catus-GCF_000181335.3.json -------------------------------------------------------------------------------- /dist/data/bands/native/felis-catus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/felis-catus.json -------------------------------------------------------------------------------- /dist/data/bands/native/galendromus-occidentalis-gca000255335v2rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/galleria-mellonella-gca003640425v2rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/gallus-gallus-GCF_000002315.6.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/gallus-gallus-GCF_000002315.6.json -------------------------------------------------------------------------------- /dist/data/bands/native/gallus-gallus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/gallus-gallus.json -------------------------------------------------------------------------------- /dist/data/bands/native/gorilla-gorilla-GCF_000151905.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/gorilla-gorilla-GCF_000151905.2.json -------------------------------------------------------------------------------- /dist/data/bands/native/gorilla-gorilla.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/gorilla-gorilla.json -------------------------------------------------------------------------------- /dist/data/bands/native/helicoverpa-armigera-gca023701775v1rs.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/hermetia-illucens-gca905115235v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/homarus-americanus-gca018991925v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-400.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-400.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-550.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-550.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.12-1200.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.12-1200.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.12-400.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.12-400.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.12-550.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.12-550.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.12-850.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.12-850.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.12.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.12.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.13-550.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.13-550.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.13-850.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.13-850.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.13.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.13.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.26-400.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.26-400.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.26-550.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.26-550.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.26.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.26.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.38.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.38.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000001405.40.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000001405.40.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_000306695.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_000306695.2.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-GCF_009914755.1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-GCF_009914755.1.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens-no-bands.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens-no-bands.json -------------------------------------------------------------------------------- /dist/data/bands/native/homo-sapiens.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/homo-sapiens.json -------------------------------------------------------------------------------- /dist/data/bands/native/hordeum-vulgare.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/hordeum-vulgare.json -------------------------------------------------------------------------------- /dist/data/bands/native/ideogram_10090_GCF_000000045.1_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ideogram_10090_GCF_000000045.1_NA_V2.json -------------------------------------------------------------------------------- /dist/data/bands/native/ideogram_10090_GCF_000000045.2_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ideogram_10090_GCF_000000045.2_NA_V2.json -------------------------------------------------------------------------------- /dist/data/bands/native/ideogram_10090_GCF_000000055.13_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ideogram_10090_GCF_000000055.13_NA_V2.json -------------------------------------------------------------------------------- /dist/data/bands/native/ideogram_10090_GCF_000000055.14_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ideogram_10090_GCF_000000055.14_NA_V2.json -------------------------------------------------------------------------------- /dist/data/bands/native/ideogram_10090_GCF_000000055.15_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ideogram_10090_GCF_000000055.15_NA_V2.json -------------------------------------------------------------------------------- /dist/data/bands/native/ideogram_10090_GCF_000000055.16_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ideogram_10090_GCF_000000055.16_NA_V2.json -------------------------------------------------------------------------------- /dist/data/bands/native/ideogram_10090_GCF_000000055.18_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ideogram_10090_GCF_000000055.18_NA_V2.json -------------------------------------------------------------------------------- /dist/data/bands/native/ideogram_10090_GCF_000000055.20_NA_V2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ideogram_10090_GCF_000000055.20_NA_V2.json -------------------------------------------------------------------------------- /dist/data/bands/native/ideogram_10116_GCF_015227685.1_NA_V1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ideogram_10116_GCF_015227685.1_NA_V1.json -------------------------------------------------------------------------------- /dist/data/bands/native/lytechinus-variegatus-gca018143015v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/macaca-fascicularis-GCF_000364345.1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/macaca-fascicularis-GCF_000364345.1.json -------------------------------------------------------------------------------- /dist/data/bands/native/macaca-fascicularis.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/macaca-fascicularis.json -------------------------------------------------------------------------------- /dist/data/bands/native/macaca-mulatta-GCF_003339765.1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/macaca-mulatta-GCF_003339765.1.json -------------------------------------------------------------------------------- /dist/data/bands/native/macaca-mulatta.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/macaca-mulatta.json -------------------------------------------------------------------------------- /dist/data/bands/native/mercenaria-mercenaria-gca014805675v2.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/metaseiulus-occidentalis-gca000255335v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/mus-musculus-GCF_000001635.20.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/mus-musculus-GCF_000001635.20.json -------------------------------------------------------------------------------- /dist/data/bands/native/mus-musculus-GCF_000001635.26.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/mus-musculus-GCF_000001635.26.json -------------------------------------------------------------------------------- /dist/data/bands/native/mus-musculus-GCF_000001635.27.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/mus-musculus-GCF_000001635.27.json -------------------------------------------------------------------------------- /dist/data/bands/native/mus-musculus-no-bands.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/mus-musculus-no-bands.json -------------------------------------------------------------------------------- /dist/data/bands/native/mus-musculus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/mus-musculus.json -------------------------------------------------------------------------------- /dist/data/bands/native/musa-acuminata.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/musa-acuminata.json -------------------------------------------------------------------------------- /dist/data/bands/native/nomascus-leucogenys-GCF_000146795.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/nomascus-leucogenys-GCF_000146795.2.json -------------------------------------------------------------------------------- /dist/data/bands/native/nomascus-leucogenys.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/nomascus-leucogenys.json -------------------------------------------------------------------------------- /dist/data/bands/native/ornithorhynchus-anatinus-GCF_000002275.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ornithorhynchus-anatinus-GCF_000002275.2.json -------------------------------------------------------------------------------- /dist/data/bands/native/ornithorhynchus-anatinus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/ornithorhynchus-anatinus.json -------------------------------------------------------------------------------- /dist/data/bands/native/oryza-sativa.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/oryza-sativa.json -------------------------------------------------------------------------------- /dist/data/bands/native/pan-paniscus-GCF_000258655.2.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/pan-paniscus-GCF_000258655.2.json -------------------------------------------------------------------------------- /dist/data/bands/native/pan-paniscus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/pan-paniscus.json -------------------------------------------------------------------------------- /dist/data/bands/native/pan-troglodytes-GCF_002880755.1.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/pan-troglodytes-GCF_002880755.1.json -------------------------------------------------------------------------------- /dist/data/bands/native/pan-troglodytes.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/pan-troglodytes.json -------------------------------------------------------------------------------- /dist/data/bands/native/penaeus-vannamei-gca003789085v1.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/plasmodium-falciparum.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/plasmodium-falciparum.json -------------------------------------------------------------------------------- /dist/data/bands/native/rattus-norvegicus-GCF_000001895.5.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/rattus-norvegicus-GCF_000001895.5.json -------------------------------------------------------------------------------- /dist/data/bands/native/rattus-norvegicus-no-bands.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/rattus-norvegicus-no-bands.json -------------------------------------------------------------------------------- /dist/data/bands/native/rattus-norvegicus.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/rattus-norvegicus.json -------------------------------------------------------------------------------- /dist/data/bands/native/saccharomyces-cerevisiae.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/saccharomyces-cerevisiae.json -------------------------------------------------------------------------------- /dist/data/bands/native/solanum-lycopersicum.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/solanum-lycopersicum.json -------------------------------------------------------------------------------- /dist/data/bands/native/sus-scrofa.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/sus-scrofa.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum-arinalrfor.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum-arinalrfor.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum-jagger.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum-jagger.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum-julius.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum-julius.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum-lancer.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum-lancer.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum-landmark.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum-landmark.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum-mace.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum-mace.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum-mattis.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum-mattis.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum-norin61.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum-norin61.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum-stanley.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum-stanley.json -------------------------------------------------------------------------------- /dist/data/bands/native/triticum-aestivum.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/triticum-aestivum.json -------------------------------------------------------------------------------- /dist/data/bands/native/varroa-destructor-gca002443255.json: -------------------------------------------------------------------------------- 1 | {"chrBands": []} -------------------------------------------------------------------------------- /dist/data/bands/native/zea-mays-b73-v2-centromeres.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/zea-mays-b73-v2-centromeres.tsv -------------------------------------------------------------------------------- /dist/data/bands/native/zea-mays.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/native/zea-mays.json -------------------------------------------------------------------------------- /dist/data/bands/ncbi/arabidopsis-thaliana.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/arabidopsis-thaliana.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/banana.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/banana.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10090_GCF_000000045.1_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10090_GCF_000000045.1_NA_V2.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10090_GCF_000000045.2_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10090_GCF_000000045.2_NA_V2.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10090_GCF_000000055.13_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10090_GCF_000000055.13_NA_V2.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10090_GCF_000000055.14_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10090_GCF_000000055.14_NA_V2.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10090_GCF_000000055.15_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10090_GCF_000000055.15_NA_V2.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10090_GCF_000000055.16_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10090_GCF_000000055.16_NA_V2.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10090_GCF_000000055.18_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10090_GCF_000000055.18_NA_V2.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10090_GCF_000000055.19_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10090_GCF_000000055.19_NA_V2.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10090_GCF_000000055.20_NA_V2.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10090_GCF_000000055.20_NA_V2.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10116_GCF_000000225.4_NA_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10116_GCF_000000225.4_NA_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_10116_GCF_015227685.1_NA_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_10116_GCF_015227685.1_NA_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_000001305.12_1200_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_000001305.12_1200_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_000001305.12_400_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_000001305.12_400_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_000001305.12_550_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_000001305.12_550_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_000001305.12_850_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_000001305.12_850_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_000001305.13_550_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_000001305.13_550_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_000001305.13_850_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_000001305.13_850_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_000001305.14_400_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_000001305.14_400_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_000001305.14_550_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_000001305.14_550_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_000001305.14_850_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_000001305.14_850_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ncbi/ideogram_9606_GCF_009914755.1_850_V1.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ncbi/ideogram_9606_GCF_009914755.1_850_V1.tsv -------------------------------------------------------------------------------- /dist/data/bands/ucsc/chr1_bands.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ucsc/chr1_bands.tsv -------------------------------------------------------------------------------- /dist/data/bands/ucsc/drosophila_melanogaster_dm6.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/bands/ucsc/drosophila_melanogaster_dm6.tsv -------------------------------------------------------------------------------- /dist/data/cache/gene-structures/homo-sapiens-gene-structures.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/gene-structures/homo-sapiens-gene-structures.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/gene-structures/mus-musculus-gene-structures.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/gene-structures/mus-musculus-gene-structures.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/bos-taurus-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/bos-taurus-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/caenorhabditis-elegans-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/caenorhabditis-elegans-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/canis-lupus-familiaris-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/canis-lupus-familiaris-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/danio-rerio-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/danio-rerio-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/drosophila-melanogaster-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/drosophila-melanogaster-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/equus-caballus-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/equus-caballus-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/felis-catus-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/felis-catus-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/gallus-gallus-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/gallus-gallus-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/homo-sapiens-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/homo-sapiens-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/macaca-fascicularis-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/macaca-fascicularis-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/macaca-mulatta-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/macaca-mulatta-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/mus-musculus-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/mus-musculus-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/pan-troglodytes-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/pan-troglodytes-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/rattus-norvegicus-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/rattus-norvegicus-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/genes/sus-scrofa-genes.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/genes/sus-scrofa-genes.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/homo-sapiens-top-genes.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/homo-sapiens-top-genes.tsv -------------------------------------------------------------------------------- /dist/data/cache/interactions/bos-taurus-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/bos-taurus-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/interactions/danio-rerio-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/danio-rerio-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/interactions/drosophila-melanogaster-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/drosophila-melanogaster-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/interactions/equus-caballus-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/equus-caballus-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/interactions/gallus-gallus-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/gallus-gallus-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/interactions/homo-sapiens-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/homo-sapiens-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/interactions/mus-musculus-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/mus-musculus-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/interactions/pan-troglodytes-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/pan-troglodytes-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/interactions/rattus-norvegicus-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/rattus-norvegicus-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/interactions/sus-scrofa-interactions.json.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/interactions/sus-scrofa-interactions.json.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/bos-taurus-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/bos-taurus-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/caenorhabditis-elegans-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/caenorhabditis-elegans-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/canis-familiaris-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/canis-familiaris-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/canis-lupus-familiaris-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/canis-lupus-familiaris-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/gallus-gallus-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/gallus-gallus-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/homo-sapiens-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/homo-sapiens-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/macaca-fascicularis-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/macaca-fascicularis-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/macaca-mulatta-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/macaca-mulatta-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/mus-musculus-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/mus-musculus-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/rattus-norvegicus-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/rattus-norvegicus-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/paralogs/sus-scrofa-paralogs.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/paralogs/sus-scrofa-paralogs.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/proteins/homo-sapiens-proteins.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/proteins/homo-sapiens-proteins.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/proteins/mus-musculus-proteins.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/proteins/mus-musculus-proteins.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/bos-taurus-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/bos-taurus-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/caenorhabditis-elegans-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/caenorhabditis-elegans-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/canis-lupus-familiaris-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/canis-lupus-familiaris-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/danio-rerio-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/danio-rerio-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/drosophila-melanogaster-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/drosophila-melanogaster-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/equus-caballus-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/equus-caballus-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/felis-catus-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/felis-catus-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/gallus-gallus-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/gallus-gallus-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/homo-sapiens-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/homo-sapiens-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/macaca-fascicularis-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/macaca-fascicularis-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/macaca-mulatta-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/macaca-mulatta-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/mus-musculus-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/mus-musculus-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/pan-troglodytes-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/pan-troglodytes-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/rattus-norvegicus-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/rattus-norvegicus-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/synonyms/sus-scrofa-synonyms.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/synonyms/sus-scrofa-synonyms.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/tissues/homo-sapiens-tissues.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/tissues/homo-sapiens-tissues.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/tissues/homo-sapiens-tissues.tsv.li.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/tissues/homo-sapiens-tissues.tsv.li.gz -------------------------------------------------------------------------------- /dist/data/cache/variants/homo-sapiens-variants.tsv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/variants/homo-sapiens-variants.tsv.gz -------------------------------------------------------------------------------- /dist/data/cache/variants/homo-sapiens-variants.tsv.li.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/data/cache/variants/homo-sapiens-variants.tsv.li.gz -------------------------------------------------------------------------------- /dist/js/ideogram.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/js/ideogram.min.js -------------------------------------------------------------------------------- /dist/js/ideogram.min.js.LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/js/ideogram.min.js.LICENSE.txt -------------------------------------------------------------------------------- /dist/js/ideogram.min.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/dist/js/ideogram.min.js.map -------------------------------------------------------------------------------- /docs/annotations.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/docs/annotations.md -------------------------------------------------------------------------------- /docs/native_annotation_formats.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/docs/native_annotation_formats.md -------------------------------------------------------------------------------- /docs/search_ideogram.md: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /examples/angular/.angular-cli.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/.angular-cli.json -------------------------------------------------------------------------------- /examples/angular/.editorconfig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/.editorconfig -------------------------------------------------------------------------------- /examples/angular/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/.gitignore -------------------------------------------------------------------------------- /examples/angular/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/README.md -------------------------------------------------------------------------------- /examples/angular/e2e/app.e2e-spec.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/e2e/app.e2e-spec.ts -------------------------------------------------------------------------------- /examples/angular/e2e/app.po.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/e2e/app.po.ts -------------------------------------------------------------------------------- /examples/angular/e2e/tsconfig.e2e.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/e2e/tsconfig.e2e.json -------------------------------------------------------------------------------- /examples/angular/ideogram_angular_example.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/ideogram_angular_example.png -------------------------------------------------------------------------------- /examples/angular/karma.conf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/karma.conf.js -------------------------------------------------------------------------------- /examples/angular/package-lock.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/package-lock.json -------------------------------------------------------------------------------- /examples/angular/package.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/package.json -------------------------------------------------------------------------------- /examples/angular/protractor.conf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/protractor.conf.js -------------------------------------------------------------------------------- /examples/angular/src/app/app.component.css: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /examples/angular/src/app/app.component.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/app/app.component.html -------------------------------------------------------------------------------- /examples/angular/src/app/app.component.spec.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/app/app.component.spec.ts -------------------------------------------------------------------------------- /examples/angular/src/app/app.component.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/app/app.component.ts -------------------------------------------------------------------------------- /examples/angular/src/app/app.module.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/app/app.module.ts -------------------------------------------------------------------------------- /examples/angular/src/app/ideogram/ideogram.component.css: -------------------------------------------------------------------------------- 1 | #ideo-container { 2 | height: 400px; 3 | } 4 | -------------------------------------------------------------------------------- /examples/angular/src/app/ideogram/ideogram.component.html: -------------------------------------------------------------------------------- 1 |
2 | -------------------------------------------------------------------------------- /examples/angular/src/app/ideogram/ideogram.component.spec.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/app/ideogram/ideogram.component.spec.ts -------------------------------------------------------------------------------- /examples/angular/src/app/ideogram/ideogram.component.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/app/ideogram/ideogram.component.ts -------------------------------------------------------------------------------- /examples/angular/src/assets/.gitkeep: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /examples/angular/src/environments/environment.prod.ts: -------------------------------------------------------------------------------- 1 | export const environment = { 2 | production: true 3 | }; 4 | -------------------------------------------------------------------------------- /examples/angular/src/environments/environment.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/environments/environment.ts -------------------------------------------------------------------------------- /examples/angular/src/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/favicon.ico -------------------------------------------------------------------------------- /examples/angular/src/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/index.html -------------------------------------------------------------------------------- /examples/angular/src/main.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/main.ts -------------------------------------------------------------------------------- /examples/angular/src/polyfills.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/polyfills.ts -------------------------------------------------------------------------------- /examples/angular/src/styles.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/styles.css -------------------------------------------------------------------------------- /examples/angular/src/test.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/test.ts -------------------------------------------------------------------------------- /examples/angular/src/tsconfig.app.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/tsconfig.app.json -------------------------------------------------------------------------------- /examples/angular/src/tsconfig.spec.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/tsconfig.spec.json -------------------------------------------------------------------------------- /examples/angular/src/typings.d.ts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/src/typings.d.ts -------------------------------------------------------------------------------- /examples/angular/tsconfig.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/tsconfig.json -------------------------------------------------------------------------------- /examples/angular/tslint.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/angular/tslint.json -------------------------------------------------------------------------------- /examples/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/index.html -------------------------------------------------------------------------------- /examples/jupyter/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/jupyter/README.md -------------------------------------------------------------------------------- /examples/jupyter/ideogram.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/jupyter/ideogram.ipynb -------------------------------------------------------------------------------- /examples/jupyter/ideogram_jupyter_example.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/jupyter/ideogram_jupyter_example.png -------------------------------------------------------------------------------- /examples/r/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/r/README.md -------------------------------------------------------------------------------- /examples/react/.env: -------------------------------------------------------------------------------- 1 | SKIP_PREFLIGHT_CHECK=true 2 | -------------------------------------------------------------------------------- /examples/react/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/.gitignore -------------------------------------------------------------------------------- /examples/react/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/README.md -------------------------------------------------------------------------------- /examples/react/ideogram_react_example.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/ideogram_react_example.png -------------------------------------------------------------------------------- /examples/react/package-lock.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/package-lock.json -------------------------------------------------------------------------------- /examples/react/package.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/package.json -------------------------------------------------------------------------------- /examples/react/public/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/public/favicon.ico -------------------------------------------------------------------------------- /examples/react/public/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/public/index.html -------------------------------------------------------------------------------- /examples/react/public/manifest.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/public/manifest.json -------------------------------------------------------------------------------- /examples/react/src/App.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/src/App.css -------------------------------------------------------------------------------- /examples/react/src/App.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/src/App.js -------------------------------------------------------------------------------- /examples/react/src/App.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/src/App.test.js -------------------------------------------------------------------------------- /examples/react/src/index.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/src/index.css -------------------------------------------------------------------------------- /examples/react/src/index.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/src/index.js -------------------------------------------------------------------------------- /examples/react/src/logo.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/src/logo.svg -------------------------------------------------------------------------------- /examples/react/src/registerServiceWorker.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/react/src/registerServiceWorker.js -------------------------------------------------------------------------------- /examples/vanilla/ancestry-tracks.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/ancestry-tracks.html -------------------------------------------------------------------------------- /examples/vanilla/ancestry.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/ancestry.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-animated.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-animated.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-basic.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-basic.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-colored-arms.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-colored-arms.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-external-data.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-external-data.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-file-url.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-file-url.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-heatmap-2d.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-heatmap-2d.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-heatmap.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-heatmap.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-histogram.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-histogram.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-overlaid.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-overlaid.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-span-heatmap-histogram.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-span-heatmap-histogram.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-span.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-span.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-track-filters.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-track-filters.html -------------------------------------------------------------------------------- /examples/vanilla/annotations-tracks.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/annotations-tracks.html -------------------------------------------------------------------------------- /examples/vanilla/auth.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/auth.html -------------------------------------------------------------------------------- /examples/vanilla/brush.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/brush.html -------------------------------------------------------------------------------- /examples/vanilla/collinear-tabs.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/collinear-tabs.html -------------------------------------------------------------------------------- /examples/vanilla/color-chromosomes.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/color-chromosomes.html -------------------------------------------------------------------------------- /examples/vanilla/comparative-genomics.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/comparative-genomics.html -------------------------------------------------------------------------------- /examples/vanilla/compare-whole-genomes.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/compare-whole-genomes.html -------------------------------------------------------------------------------- /examples/vanilla/create-custom.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/create-custom.html -------------------------------------------------------------------------------- /examples/vanilla/cursor.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/cursor.html -------------------------------------------------------------------------------- /examples/vanilla/custom-organism.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/custom-organism.html -------------------------------------------------------------------------------- /examples/vanilla/differential-expression.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/differential-expression.html -------------------------------------------------------------------------------- /examples/vanilla/eukaryotes.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/eukaryotes.html -------------------------------------------------------------------------------- /examples/vanilla/gene-leads-example-style.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/gene-leads-example-style.css -------------------------------------------------------------------------------- /examples/vanilla/gene-leads-example-utils.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/gene-leads-example-utils.js -------------------------------------------------------------------------------- /examples/vanilla/gene-leads-lite.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/gene-leads-lite.html -------------------------------------------------------------------------------- /examples/vanilla/gene-leads.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/gene-leads.html -------------------------------------------------------------------------------- /examples/vanilla/genome-alignment.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/genome-alignment.html -------------------------------------------------------------------------------- /examples/vanilla/geometry-collinear.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/geometry-collinear.html -------------------------------------------------------------------------------- /examples/vanilla/highlights-basic.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/highlights-basic.html -------------------------------------------------------------------------------- /examples/vanilla/highlights-groups.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/highlights-groups.html -------------------------------------------------------------------------------- /examples/vanilla/homology-advanced.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-advanced.html -------------------------------------------------------------------------------- /examples/vanilla/homology-basic.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-basic.html -------------------------------------------------------------------------------- /examples/vanilla/homology-chimpanzee-gorilla.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-chimpanzee-gorilla.html -------------------------------------------------------------------------------- /examples/vanilla/homology-grape-tomato.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-grape-tomato.html -------------------------------------------------------------------------------- /examples/vanilla/homology-human-chimpanzee-single.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-human-chimpanzee-single.html -------------------------------------------------------------------------------- /examples/vanilla/homology-human-chimpanzee.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-human-chimpanzee.html -------------------------------------------------------------------------------- /examples/vanilla/homology-human-fly.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-human-fly.html -------------------------------------------------------------------------------- /examples/vanilla/homology-human-grape-single.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-human-grape-single.html -------------------------------------------------------------------------------- /examples/vanilla/homology-human-grape.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-human-grape.html -------------------------------------------------------------------------------- /examples/vanilla/homology-human-plant-single.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-human-plant-single.html -------------------------------------------------------------------------------- /examples/vanilla/homology-human-worm-single.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-human-worm-single.html -------------------------------------------------------------------------------- /examples/vanilla/homology-human-worm.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-human-worm.html -------------------------------------------------------------------------------- /examples/vanilla/homology-interspecies.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/homology-interspecies.html -------------------------------------------------------------------------------- /examples/vanilla/human.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/human.html -------------------------------------------------------------------------------- /examples/vanilla/ideogram_histogram_all_human_genes.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/ideogram_histogram_all_human_genes.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_animated_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_animated_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_basic_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_basic_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_external_data_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_external_data_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_file_url_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_file_url_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_heatmap_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_heatmap_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_histogram_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_histogram_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_overlaid_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_overlaid_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_span_heatmap_histogram_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_span_heatmap_histogram_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_span_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_span_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/annotations_tracks_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/annotations_tracks_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/brush_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/brush_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/color_chromosomes_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/color_chromosomes_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/cursor_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/cursor_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/differential_expression_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/differential_expression_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/eukaryotes_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/eukaryotes_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/gene_leads_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/gene_leads_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/genome_alignment_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/genome_alignment_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/geometry_collinear_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/geometry_collinear_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/highlights_basic_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/highlights_basic_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/highlights_groups_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/highlights_groups_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/homology_advanced_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/homology_advanced_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/homology_basic_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/homology_basic_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/homology_interspecies_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/homology_interspecies_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/human_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/human_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/ideogram_favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/ideogram_favicon.ico -------------------------------------------------------------------------------- /examples/vanilla/img/layout_small_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/layout_small_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/layout_tabs_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/layout_tabs_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/mouse_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/mouse_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/multiple_primates_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/multiple_primates_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/multiple_trio_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/multiple_trio_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/orthologs_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/orthologs_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/ploidy_basic_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/ploidy_basic_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/ploidy_rearrangements_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/ploidy_rearrangements_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/img/ploidy_recombination_ideogram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/img/ploidy_recombination_ideogram.png -------------------------------------------------------------------------------- /examples/vanilla/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/index.html -------------------------------------------------------------------------------- /examples/vanilla/layout-small.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/layout-small.html -------------------------------------------------------------------------------- /examples/vanilla/layout-tabs.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/layout-tabs.html -------------------------------------------------------------------------------- /examples/vanilla/mouse.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/mouse.html -------------------------------------------------------------------------------- /examples/vanilla/multiple-primates.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/multiple-primates.html -------------------------------------------------------------------------------- /examples/vanilla/multiple-trio-sv.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/multiple-trio-sv.html -------------------------------------------------------------------------------- /examples/vanilla/multiple-trio.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/multiple-trio.html -------------------------------------------------------------------------------- /examples/vanilla/orthologs.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/orthologs.html -------------------------------------------------------------------------------- /examples/vanilla/paralogs.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/paralogs.html -------------------------------------------------------------------------------- /examples/vanilla/ploidy-basic.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/ploidy-basic.html -------------------------------------------------------------------------------- /examples/vanilla/ploidy-rearrangements.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/ploidy-rearrangements.html -------------------------------------------------------------------------------- /examples/vanilla/ploidy-recombination.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/ploidy-recombination.html -------------------------------------------------------------------------------- /examples/vanilla/related-genes.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/related-genes.html -------------------------------------------------------------------------------- /examples/vanilla/yeast-histogram.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vanilla/yeast-histogram.html -------------------------------------------------------------------------------- /examples/vue/.babelrc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/.babelrc -------------------------------------------------------------------------------- /examples/vue/.editorconfig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/.editorconfig -------------------------------------------------------------------------------- /examples/vue/.eslintignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/.eslintignore -------------------------------------------------------------------------------- /examples/vue/.eslintrc.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/.eslintrc.js -------------------------------------------------------------------------------- /examples/vue/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/.gitignore -------------------------------------------------------------------------------- /examples/vue/.postcssrc.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/.postcssrc.js -------------------------------------------------------------------------------- /examples/vue/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/README.md -------------------------------------------------------------------------------- /examples/vue/build/build.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/build/build.js -------------------------------------------------------------------------------- /examples/vue/build/check-versions.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/build/check-versions.js -------------------------------------------------------------------------------- /examples/vue/build/logo.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/build/logo.png -------------------------------------------------------------------------------- /examples/vue/build/utils.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/build/utils.js -------------------------------------------------------------------------------- /examples/vue/build/vue-loader.conf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/build/vue-loader.conf.js -------------------------------------------------------------------------------- /examples/vue/build/webpack.base.conf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/build/webpack.base.conf.js -------------------------------------------------------------------------------- /examples/vue/build/webpack.dev.conf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/build/webpack.dev.conf.js -------------------------------------------------------------------------------- /examples/vue/build/webpack.prod.conf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/build/webpack.prod.conf.js -------------------------------------------------------------------------------- /examples/vue/build/webpack.test.conf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/build/webpack.test.conf.js -------------------------------------------------------------------------------- /examples/vue/config/dev.env.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/config/dev.env.js -------------------------------------------------------------------------------- /examples/vue/config/index.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/config/index.js -------------------------------------------------------------------------------- /examples/vue/config/prod.env.js: -------------------------------------------------------------------------------- 1 | 'use strict' 2 | module.exports = { 3 | NODE_ENV: '"production"' 4 | } 5 | -------------------------------------------------------------------------------- /examples/vue/config/test.env.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/config/test.env.js -------------------------------------------------------------------------------- /examples/vue/ideogram_vue_example.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/ideogram_vue_example.png -------------------------------------------------------------------------------- /examples/vue/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/index.html -------------------------------------------------------------------------------- /examples/vue/package-lock.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/package-lock.json -------------------------------------------------------------------------------- /examples/vue/package.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/package.json -------------------------------------------------------------------------------- /examples/vue/src/App.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/src/App.vue -------------------------------------------------------------------------------- /examples/vue/src/assets/logo.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/src/assets/logo.png -------------------------------------------------------------------------------- /examples/vue/src/components/Ideogram.vue: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/src/components/Ideogram.vue -------------------------------------------------------------------------------- /examples/vue/src/main.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/src/main.js -------------------------------------------------------------------------------- /examples/vue/src/router/index.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/src/router/index.js -------------------------------------------------------------------------------- /examples/vue/static/.gitkeep: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /examples/vue/test/unit/.eslintrc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/test/unit/.eslintrc -------------------------------------------------------------------------------- /examples/vue/test/unit/index.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/test/unit/index.js -------------------------------------------------------------------------------- /examples/vue/test/unit/karma.conf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/test/unit/karma.conf.js -------------------------------------------------------------------------------- /examples/vue/test/unit/specs/HelloWorld.spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/examples/vue/test/unit/specs/HelloWorld.spec.js -------------------------------------------------------------------------------- /karma.conf.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/karma.conf.js -------------------------------------------------------------------------------- /package.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/package.json -------------------------------------------------------------------------------- /scripts/js/prepublish.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/js/prepublish.js -------------------------------------------------------------------------------- /scripts/python/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /scripts/python/analyze_ancestrydna.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/analyze_ancestrydna.py -------------------------------------------------------------------------------- /scripts/python/cache/__init__.py: -------------------------------------------------------------------------------- 1 | 2 | -------------------------------------------------------------------------------- /scripts/python/cache/compress_transcripts.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/cache/compress_transcripts.py -------------------------------------------------------------------------------- /scripts/python/cache/gene_cache.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/cache/gene_cache.py -------------------------------------------------------------------------------- /scripts/python/cache/gene_structure_cache.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/cache/gene_structure_cache.py -------------------------------------------------------------------------------- /scripts/python/cache/pfam_unintegrated.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/cache/pfam_unintegrated.tsv -------------------------------------------------------------------------------- /scripts/python/cache/protein_cache.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/cache/protein_cache.py -------------------------------------------------------------------------------- /scripts/python/cache/synonym_cache.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/cache/synonym_cache.py -------------------------------------------------------------------------------- /scripts/python/cache/tissue_cache.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/cache/tissue_cache.py -------------------------------------------------------------------------------- /scripts/python/cache/variant_cache.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/cache/variant_cache.py -------------------------------------------------------------------------------- /scripts/python/convert_biomart_to_annots.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/convert_biomart_to_annots.py -------------------------------------------------------------------------------- /scripts/python/convert_gvf_to_annots.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/convert_gvf_to_annots.py -------------------------------------------------------------------------------- /scripts/python/create_annots.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/create_annots.py -------------------------------------------------------------------------------- /scripts/python/fetch_chromosomes/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /scripts/python/fetch_chromosomes/centromeres.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/fetch_chromosomes/centromeres.py -------------------------------------------------------------------------------- /scripts/python/fetch_chromosomes/convert_band_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/fetch_chromosomes/convert_band_data.py -------------------------------------------------------------------------------- /scripts/python/fetch_chromosomes/ensembl.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/fetch_chromosomes/ensembl.py -------------------------------------------------------------------------------- /scripts/python/fetch_chromosomes/fetch_cytobands_from_dbs.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/fetch_chromosomes/fetch_cytobands_from_dbs.py -------------------------------------------------------------------------------- /scripts/python/fetch_chromosomes/genomaize.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/fetch_chromosomes/genomaize.py -------------------------------------------------------------------------------- /scripts/python/fetch_chromosomes/settings.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/fetch_chromosomes/settings.py -------------------------------------------------------------------------------- /scripts/python/fetch_chromosomes/ucsc.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/fetch_chromosomes/ucsc.py -------------------------------------------------------------------------------- /scripts/python/fetch_chromosomes/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/fetch_chromosomes/utils.py -------------------------------------------------------------------------------- /scripts/python/get_chromosomes.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/get_chromosomes.py -------------------------------------------------------------------------------- /scripts/python/lib.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/lib.py -------------------------------------------------------------------------------- /scripts/python/list_assemblies.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/list_assemblies.py -------------------------------------------------------------------------------- /scripts/python/requirements.txt: -------------------------------------------------------------------------------- 1 | pytest==6.2.5 2 | pymysql==1.1.0 3 | -------------------------------------------------------------------------------- /scripts/python/tests/test_gene_cache.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/scripts/python/tests/test_gene_cache.py -------------------------------------------------------------------------------- /src/js/annotations/annotations.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/annotations.js -------------------------------------------------------------------------------- /src/js/annotations/download.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/download.js -------------------------------------------------------------------------------- /src/js/annotations/draw.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/draw.js -------------------------------------------------------------------------------- /src/js/annotations/events.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/events.js -------------------------------------------------------------------------------- /src/js/annotations/filter.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/filter.js -------------------------------------------------------------------------------- /src/js/annotations/heatmap-2d.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/heatmap-2d.js -------------------------------------------------------------------------------- /src/js/annotations/heatmap-collinear-vertical.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/heatmap-collinear-vertical.js -------------------------------------------------------------------------------- /src/js/annotations/heatmap-collinear.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/heatmap-collinear.js -------------------------------------------------------------------------------- /src/js/annotations/heatmap-lib.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/heatmap-lib.js -------------------------------------------------------------------------------- /src/js/annotations/heatmap.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/heatmap.js -------------------------------------------------------------------------------- /src/js/annotations/highlight.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/highlight.js -------------------------------------------------------------------------------- /src/js/annotations/histogram.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/histogram.js -------------------------------------------------------------------------------- /src/js/annotations/labels.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/labels.js -------------------------------------------------------------------------------- /src/js/annotations/legend.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/legend.js -------------------------------------------------------------------------------- /src/js/annotations/process.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/process.js -------------------------------------------------------------------------------- /src/js/annotations/synteny-collinear-horizontal.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/synteny-collinear-horizontal.js -------------------------------------------------------------------------------- /src/js/annotations/synteny-collinear.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/synteny-collinear.js -------------------------------------------------------------------------------- /src/js/annotations/synteny-lib.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/synteny-lib.js -------------------------------------------------------------------------------- /src/js/annotations/synteny.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/synteny.js -------------------------------------------------------------------------------- /src/js/annotations/track-labels-collinear.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/track-labels-collinear.js -------------------------------------------------------------------------------- /src/js/annotations/track-labels.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/annotations/track-labels.js -------------------------------------------------------------------------------- /src/js/assembly-manifest.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/assembly-manifest.js -------------------------------------------------------------------------------- /src/js/bands/bands.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/bands/bands.js -------------------------------------------------------------------------------- /src/js/bands/draw.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/bands/draw.js -------------------------------------------------------------------------------- /src/js/bands/fetch.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/bands/fetch.js -------------------------------------------------------------------------------- /src/js/bands/parse.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/bands/parse.js -------------------------------------------------------------------------------- /src/js/bands/show.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/bands/show.js -------------------------------------------------------------------------------- /src/js/bands/styles.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/bands/styles.js -------------------------------------------------------------------------------- /src/js/brush.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/brush.js -------------------------------------------------------------------------------- /src/js/collinear-vertical.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/collinear-vertical.js -------------------------------------------------------------------------------- /src/js/collinear.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/collinear.js -------------------------------------------------------------------------------- /src/js/color.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/color.js -------------------------------------------------------------------------------- /src/js/coordinate-converters.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/coordinate-converters.js -------------------------------------------------------------------------------- /src/js/cursor.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/cursor.js -------------------------------------------------------------------------------- /src/js/filter.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/filter.js -------------------------------------------------------------------------------- /src/js/ideogram.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/ideogram.js -------------------------------------------------------------------------------- /src/js/index.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/index.js -------------------------------------------------------------------------------- /src/js/init/caches/cache-lib.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/cache-lib.js -------------------------------------------------------------------------------- /src/js/init/caches/cache.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/cache.js -------------------------------------------------------------------------------- /src/js/init/caches/gene-cache-worker.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/gene-cache-worker.js -------------------------------------------------------------------------------- /src/js/init/caches/gene-structure-cache-worker.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/gene-structure-cache-worker.js -------------------------------------------------------------------------------- /src/js/init/caches/interaction-cache-worker.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/interaction-cache-worker.js -------------------------------------------------------------------------------- /src/js/init/caches/paralog-cache-worker.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/paralog-cache-worker.js -------------------------------------------------------------------------------- /src/js/init/caches/protein-cache-worker.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/protein-cache-worker.js -------------------------------------------------------------------------------- /src/js/init/caches/synonym-cache-worker.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/synonym-cache-worker.js -------------------------------------------------------------------------------- /src/js/init/caches/tissue-cache-worker.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/tissue-cache-worker.js -------------------------------------------------------------------------------- /src/js/init/caches/variant-cache-worker.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/caches/variant-cache-worker.js -------------------------------------------------------------------------------- /src/js/init/configure.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/configure.js -------------------------------------------------------------------------------- /src/js/init/finish-init.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/finish-init.js -------------------------------------------------------------------------------- /src/js/init/init.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/init.js -------------------------------------------------------------------------------- /src/js/init/organism-metadata.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/organism-metadata.js -------------------------------------------------------------------------------- /src/js/init/write-container.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/init/write-container.js -------------------------------------------------------------------------------- /src/js/kit/analyze-related-genes.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/analyze-related-genes.js -------------------------------------------------------------------------------- /src/js/kit/gene-structure.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/gene-structure.js -------------------------------------------------------------------------------- /src/js/kit/pathway-viewer.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/pathway-viewer.js -------------------------------------------------------------------------------- /src/js/kit/protein-color.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/protein-color.js -------------------------------------------------------------------------------- /src/js/kit/protein.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/protein.js -------------------------------------------------------------------------------- /src/js/kit/related-genes.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/related-genes.js -------------------------------------------------------------------------------- /src/js/kit/tippy-styles.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/tippy-styles.js -------------------------------------------------------------------------------- /src/js/kit/tissue.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/tissue.js -------------------------------------------------------------------------------- /src/js/kit/variant.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/variant.js -------------------------------------------------------------------------------- /src/js/kit/wikipathways.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/kit/wikipathways.js -------------------------------------------------------------------------------- /src/js/layouts/horizontal-layout.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/layouts/horizontal-layout.js -------------------------------------------------------------------------------- /src/js/layouts/layout-adapter.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/layouts/layout-adapter.js -------------------------------------------------------------------------------- /src/js/layouts/layout.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/layouts/layout.js -------------------------------------------------------------------------------- /src/js/layouts/paired-layout.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/layouts/paired-layout.js -------------------------------------------------------------------------------- /src/js/layouts/small-layout.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/layouts/small-layout.js -------------------------------------------------------------------------------- /src/js/layouts/vertical-layout.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/layouts/vertical-layout.js -------------------------------------------------------------------------------- /src/js/lib.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/lib.js -------------------------------------------------------------------------------- /src/js/model-adapter.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/model-adapter.js -------------------------------------------------------------------------------- /src/js/model-no-bands-adapter.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/model-no-bands-adapter.js -------------------------------------------------------------------------------- /src/js/parsers/bed-parser.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/parsers/bed-parser.js -------------------------------------------------------------------------------- /src/js/parsers/expression-matrix-parser.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/parsers/expression-matrix-parser.js -------------------------------------------------------------------------------- /src/js/parsers/tsv-parser.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/parsers/tsv-parser.js -------------------------------------------------------------------------------- /src/js/ploidy.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/ploidy.js -------------------------------------------------------------------------------- /src/js/range.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/range.js -------------------------------------------------------------------------------- /src/js/services/eutils-config.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/services/eutils-config.js -------------------------------------------------------------------------------- /src/js/services/organisms.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/services/organisms.js -------------------------------------------------------------------------------- /src/js/services/services.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/services/services.js -------------------------------------------------------------------------------- /src/js/sex-chromosomes.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/sex-chromosomes.js -------------------------------------------------------------------------------- /src/js/tools/settings-ui.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/tools/settings-ui.js -------------------------------------------------------------------------------- /src/js/tools/settings.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/tools/settings.js -------------------------------------------------------------------------------- /src/js/tools/tools.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/tools/tools.js -------------------------------------------------------------------------------- /src/js/version.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/version.js -------------------------------------------------------------------------------- /src/js/views/chromosome-labels.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/views/chromosome-labels.js -------------------------------------------------------------------------------- /src/js/views/chromosome-model.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/views/chromosome-model.js -------------------------------------------------------------------------------- /src/js/views/chromosome-util.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/views/chromosome-util.js -------------------------------------------------------------------------------- /src/js/views/chromosome.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/views/chromosome.js -------------------------------------------------------------------------------- /src/js/views/draw-chromosomes.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/views/draw-chromosomes.js -------------------------------------------------------------------------------- /src/js/views/metacentric-chromosome.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/views/metacentric-chromosome.js -------------------------------------------------------------------------------- /src/js/views/telocentric-chromosome.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/src/js/views/telocentric-chromosome.js -------------------------------------------------------------------------------- /test/cli-runner.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/cli-runner.html -------------------------------------------------------------------------------- /test/cli-test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/cli-test.js -------------------------------------------------------------------------------- /test/offline/annotation-labels.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/annotation-labels.test.js -------------------------------------------------------------------------------- /test/offline/brush.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/brush.test.js -------------------------------------------------------------------------------- /test/offline/collinear.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/collinear.test.js -------------------------------------------------------------------------------- /test/offline/color.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/color.test.js -------------------------------------------------------------------------------- /test/offline/core.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/core.test.js -------------------------------------------------------------------------------- /test/offline/filter.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/filter.test.js -------------------------------------------------------------------------------- /test/offline/gene-structure.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/gene-structure.test.js -------------------------------------------------------------------------------- /test/offline/heatmap.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/heatmap.test.js -------------------------------------------------------------------------------- /test/offline/highlight.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/highlight.test.js -------------------------------------------------------------------------------- /test/offline/histogram.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/histogram.test.js -------------------------------------------------------------------------------- /test/offline/ploidy.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/ploidy.test.js -------------------------------------------------------------------------------- /test/offline/synteny.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/synteny.test.js -------------------------------------------------------------------------------- /test/offline/tissue.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/tissue.test.js -------------------------------------------------------------------------------- /test/offline/toggle.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/toggle.test.js -------------------------------------------------------------------------------- /test/offline/tools.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/offline/tools.test.js -------------------------------------------------------------------------------- /test/online/annotation.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/online/annotation.test.js -------------------------------------------------------------------------------- /test/online/custom-organism.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/online/custom-organism.test.js -------------------------------------------------------------------------------- /test/online/ncbi.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/online/ncbi.test.js -------------------------------------------------------------------------------- /test/online/pathway-diagrams.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/online/pathway-diagrams.test.js -------------------------------------------------------------------------------- /test/online/related-genes.test.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/test/online/related-genes.test.js -------------------------------------------------------------------------------- /webpack.config.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/eweitz/ideogram/HEAD/webpack.config.js --------------------------------------------------------------------------------