├── .gitignore ├── LICENSE ├── LR-splitpipe ├── __init__.py ├── add_bam_tag.py ├── demultiplex.py ├── plot_ranked_barcodes.py ├── plotting.py └── utils.py ├── README.md ├── barcodes ├── bc_8nt_v1.csv ├── bc_8nt_v2.csv ├── bc_data_n192_v4.csv ├── bc_data_n24_v4.csv ├── bc_data_n96_v4.csv ├── bc_data_v1.csv ├── bc_data_v2.csv ├── bc_dict_n192_v4.json ├── bc_dict_n24_v4.json ├── bc_dict_n96_v4.json ├── bc_dict_v1.json ├── bc_dict_v1.pkl ├── bc_dict_v2.json ├── bc_dict_v2.pkl ├── oligo_dt.csv └── rand_hex.csv ├── demux_pipeline.png ├── refs.md └── testing ├── __pycache__ └── test_graph.cpython-37-pytest-5.3.2.pyc └── test_demultiplex.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fairliereese/LR-splitpipe/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- 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