├── .github
    └── workflows
    │   ├── linux-pull-request.yml
    │   ├── linux-push.yml
    │   ├── linux-release.yml
    │   ├── macOS-release.yml
    │   ├── macos-pull-request.yml
    │   ├── macos-push.yml
    │   ├── release-tag-dispatch.yml
    │   ├── windows-pull-request.yml
    │   ├── windows-push.yml
    │   └── windows-release.yml
├── .gitignore
├── Abaqus
    ├── AbaqusExport.cpp
    ├── AbaqusExport.h
    ├── AbaqusImport.cpp
    ├── AbaqusImport.h
    ├── AbaqusModel.cpp
    └── AbaqusModel.h
├── Ansys
    ├── AnsysImport.cpp
    └── AnsysImport.h
├── BUILD.md
├── CMakeLists.txt
├── CODE_OF_CONDUCT.md
├── CONTRIBUTING.md
├── CUILib
    ├── CUILib.pro
    ├── HistogramViewer.cpp
    ├── HistogramViewer.h
    ├── ImageViewer.cpp
    ├── ImageViewer.h
    └── stdafx.h
├── Comsol
    ├── COMSOLImport.cpp
    └── COMSOLImport.h
├── Documentation
    ├── BuildGuide
    │   ├── CMakeGUI.png
    │   ├── CMakeGUIFull.png
    │   └── ccmake.png
    ├── Copyright-FEBio-Studio.txt
    ├── Doxygen
    │   ├── Doxyfile
    │   ├── Doxyfile_dox_only
    │   ├── index.dox
    │   ├── mesh_inspector.dox
    │   └── post_add_datafield.dox
    ├── FEBioStudio.bib
    ├── FEBioStudioReleaseNotes.txt
    ├── FEBioStudio_EULA.txt
    ├── FEBioStudio_User_Manual.lyx
    ├── FEBioStudio_User_Manual.pdf
    ├── Figures
    │   ├── 3dimage_settings.png
    │   ├── Figure1.png
    │   ├── Figure2.png
    │   ├── Figure2_18.png
    │   ├── Figure2_24.png
    │   ├── Figure2_73.png
    │   ├── Figure2_78.png
    │   ├── Figure2_79.png
    │   ├── Figure3.png
    │   ├── Figure4.png
    │   ├── Figure5.png
    │   ├── Figure_2_2.png
    │   ├── Figure_2_3.png
    │   ├── Figure_2_4.png
    │   ├── Graph_with_tools_panel.png
    │   ├── ImageMapTool.png
    │   ├── Material Viewer.png
    │   ├── Model Viewer.png
    │   ├── NIHlogo.png
    │   ├── PostView.png
    │   ├── Splash.png
    │   ├── addFolder.png
    │   ├── addPub.png
    │   ├── add_bc.png
    │   ├── add_contact.png
    │   ├── add_data_from_file.png
    │   ├── add_ic.png
    │   ├── add_rigid_connector.png
    │   ├── add_rigid_constraint.png
    │   ├── add_rigid_ic.png
    │   ├── add_rigid_load.png
    │   ├── add_step.png
    │   ├── add_surface_constraint.png
    │   ├── add_surface_load.png
    │   ├── back.png
    │   ├── backface.png
    │   ├── box.png
    │   ├── build_panel.png
    │   ├── chart.png
    │   ├── clear.png
    │   ├── clipboard.png
    │   ├── clock.png
    │   ├── clone.png
    │   ├── clonegrid.png
    │   ├── clonerevolve.png
    │   ├── colormap.png
    │   ├── cone.png
    │   ├── coord.png
    │   ├── copy.png
    │   ├── curve_editor.png
    │   ├── curves.png
    │   ├── cut.png
    │   ├── cylinder.png
    │   ├── cylinderinbox.png
    │   ├── delete.png
    │   ├── deleteRemote.png
    │   ├── deletepoint.png
    │   ├── detach.png
    │   ├── disc.png
    │   ├── discrete.png
    │   ├── dogbone.png
    │   ├── download.png
    │   ├── edge.png
    │   ├── edit.png
    │   ├── element.png
    │   ├── ellipsoid.png
    │   ├── equation_editor.png
    │   ├── expand.png
    │   ├── extract.png
    │   ├── extrude.png
    │   ├── face.png
    │   ├── febio.png
    │   ├── febio_plugins.png
    │   ├── fiberODFRemesh.png
    │   ├── figFiberODF1.png
    │   ├── figFiberODF2.png
    │   ├── file viewer.png
    │   ├── font_bold.png
    │   ├── font_italic.png
    │   ├── formula.png
    │   ├── forward.png
    │   ├── graph.png
    │   ├── graph_tools.png
    │   ├── hexagon.png
    │   ├── hide.png
    │   ├── hollowsphere.png
    │   ├── imageMapExample1.png
    │   ├── imageMapExample2.png
    │   ├── image_renderers.png
    │   ├── imageslice.png
    │   ├── inspect.png
    │   ├── integrate.png
    │   ├── integrate_window.png
    │   ├── isosurface.png
    │   ├── job_monitor.png
    │   ├── launchConfigDlg.png
    │   ├── loft.png
    │   ├── marching_cubes.png
    │   ├── material.png
    │   ├── material_editor.png
    │   ├── measure.png
    │   ├── merge.png
    │   ├── mesh_inspector.png
    │   ├── mirror.png
    │   ├── new.png
    │   ├── new_model.png
    │   ├── newpoint.png
    │   ├── next.png
    │   ├── node.png
    │   ├── open.png
    │   ├── openContaining.png
    │   ├── options.png
    │   ├── options_colormap.png
    │   ├── output_custom_plot.png
    │   ├── output_log.png
    │   ├── output_plot.png
    │   ├── p2pline.png
    │   ├── particle.png
    │   ├── paste.png
    │   ├── pivot.png
    │   ├── play.png
    │   ├── post_slice.png
    │   ├── prev.png
    │   ├── preview.png
    │   ├── properties.png
    │   ├── reaction_editor.png
    │   ├── redo.png
    │   ├── refresh.png
    │   ├── rename.png
    │   ├── replaceFile.png
    │   ├── repoLocationDlg.png
    │   ├── repoLogin.png
    │   ├── repoPanel.png
    │   ├── requestUploadPermissions.png
    │   ├── ring.png
    │   ├── rotate.png
    │   ├── run_febio.png
    │   ├── save.png
    │   ├── scale.png
    │   ├── search.png
    │   ├── selEdge.png
    │   ├── selElem.png
    │   ├── selFace.png
    │   ├── selNode.png
    │   ├── select.png
    │   ├── selectAdd.png
    │   ├── selectCircle.png
    │   ├── selectCurves.png
    │   ├── selectDel.png
    │   ├── selectFree.png
    │   ├── selectNodes.png
    │   ├── selectObject.png
    │   ├── selectPart.png
    │   ├── selectRect.png
    │   ├── selectSub.png
    │   ├── selectSurface.png
    │   ├── select_circle.png
    │   ├── select_connected.png
    │   ├── select_free.png
    │   ├── select_item.png
    │   ├── select_path.png
    │   ├── select_rect.png
    │   ├── settings.png
    │   ├── settings_background_dark.png
    │   ├── settings_colormap.png
    │   ├── settings_lighting.png
    │   ├── settings_rendering.png
    │   ├── show.png
    │   ├── show_mesh.png
    │   ├── slice.png
    │   ├── snapshot.png
    │   ├── snaptogrid.png
    │   ├── snaptonode.png
    │   ├── solidarc.png
    │   ├── sphere.png
    │   ├── sphereinbox.png
    │   ├── spring.png
    │   ├── square.png
    │   ├── streamlines.png
    │   ├── summary.png
    │   ├── sync.png
    │   ├── tensor.png
    │   ├── text properties.png
    │   ├── text_properties.png
    │   ├── thintube.png
    │   ├── toggle_visible.png
    │   ├── torus.png
    │   ├── translate.png
    │   ├── tube.png
    │   ├── undo.png
    │   ├── up.png
    │   ├── upload.png
    │   ├── uploadWzd1.png
    │   ├── uploadWzd2.png
    │   ├── vectors.png
    │   ├── volrender.png
    │   ├── warning.png
    │   ├── welcome.png
    │   ├── wire.png
    │   ├── zoom_all.png
    │   ├── zoom_extents.png
    │   ├── zoom_fit.png
    │   ├── zoom_select.png
    │   ├── zoom_selected.png
    │   ├── zoom_x.png
    │   └── zoom_y.png
    ├── InstallerImages
    │   ├── Left Side Image Transparent.png
    │   ├── Left Side Image.png
    │   ├── Left Side Image.xcf
    │   ├── Logo.png
    │   ├── Logo.xcf
    │   ├── Splash.png
    │   └── Splash.xcf
    ├── Splash Screen.pptx
    ├── febioUMWebDefines.py
    ├── helpDiscrepancies.txt
    └── splash.png
├── FEBio
    ├── FEBioException.h
    ├── FEBioExport.cpp
    ├── FEBioExport.h
    ├── FEBioExport12.cpp
    ├── FEBioExport12.h
    ├── FEBioExport2.cpp
    ├── FEBioExport2.h
    ├── FEBioExport25.cpp
    ├── FEBioExport25.h
    ├── FEBioExport3.cpp
    ├── FEBioExport3.h
    ├── FEBioExport4.cpp
    ├── FEBioExport4.h
    ├── FEBioFormat.cpp
    ├── FEBioFormat.h
    ├── FEBioFormat12.cpp
    ├── FEBioFormat12.h
    ├── FEBioFormat2.cpp
    ├── FEBioFormat2.h
    ├── FEBioFormat25.cpp
    ├── FEBioFormat25.h
    ├── FEBioFormat3.cpp
    ├── FEBioFormat3.h
    ├── FEBioFormat4.cpp
    ├── FEBioFormat4.h
    ├── FEBioFormatOld.cpp
    ├── FEBioFormatOld.h
    ├── FEBioImport.cpp
    ├── FEBioImport.h
    ├── FEBioInputModel.cpp
    ├── FEBioInputModel.h
    └── stdafx.h
├── FEBioLink
    ├── FEBioClass.cpp
    ├── FEBioClass.h
    ├── FEBioInit.cpp
    ├── FEBioInit.h
    ├── FEBioInterface.cpp
    ├── FEBioInterface.h
    ├── FEBioModule.cpp
    └── FEBioModule.h
├── FEBioStudio
    ├── 2DImageTimeView.cpp
    ├── 2DImageTimeView.h
    ├── 3PointAngleTool.cpp
    ├── 3PointAngleTool.h
    ├── 4PointAngleTool.cpp
    ├── 4PointAngleTool.h
    ├── AVIAnimation.cpp
    ├── AVIAnimation.h
    ├── Animation.cpp
    ├── Animation.h
    ├── AreaCalculatorTool.cpp
    ├── AreaCalculatorTool.h
    ├── BuildPanel.cpp
    ├── BuildPanel.h
    ├── ButtonBox.cpp
    ├── ButtonBox.h
    ├── CColorButton.cpp
    ├── CColorButton.h
    ├── CDlgFiberViz.cpp
    ├── Command.cpp
    ├── Command.h
    ├── CommandManager.cpp
    ├── CommandManager.h
    ├── CommandPanel.cpp
    ├── CommandPanel.h
    ├── Commands.cpp
    ├── Commands.h
    ├── ConchoidFitTool.cpp
    ├── ConchoidFitTool.h
    ├── CreateGeodesicCurvePane.cpp
    ├── CreateGeodesicCurvePane.h
    ├── CreateP2PLinePane.cpp
    ├── CreateP2PlinePane.h
    ├── CreatePanel.cpp
    ├── CreatePanel.h
    ├── CreateSpringPane.cpp
    ├── CreateSpringPane.h
    ├── CurveEditor.cpp
    ├── CurveEditor.h
    ├── CurveIntersectProps.cpp
    ├── CurveIntersectProps.h
    ├── CurvePicker.cpp
    ├── CurvePicker.h
    ├── CurveToBeamTool.cpp
    ├── CurveToBeamTool.h
    ├── CustomLineEdit.cpp
    ├── CustomLineEdit.h
    ├── CustomThread.cpp
    ├── CustomThread.h
    ├── DataFieldSelector.cpp
    ├── DataFieldSelector.h
    ├── DiscreteElementNetworkTool.cpp
    ├── DiscreteElementNetworkTool.h
    ├── DlgAddChemicalReaction.cpp
    ├── DlgAddChemicalReaction.h
    ├── DlgAddEquation.cpp
    ├── DlgAddEquation.h
    ├── DlgAddMembraneReaction.cpp
    ├── DlgAddMembraneReaction.h
    ├── DlgAddMeshData.cpp
    ├── DlgAddMeshData.h
    ├── DlgAddNodalLoad.cpp
    ├── DlgAddNodalLoad.h
    ├── DlgAddPhysicsItem.cpp
    ├── DlgAddPhysicsItem.h
    ├── DlgAddPublication.cpp
    ├── DlgAddPublication.h
    ├── DlgAddRigidConnector.cpp
    ├── DlgAddRigidConnector.h
    ├── DlgAddRigidConstraint.cpp
    ├── DlgAddRigidConstraint.h
    ├── DlgAddStep.cpp
    ├── DlgAddStep.h
    ├── DlgBatchConvert.cpp
    ├── DlgBatchConvert.h
    ├── DlgBugReport.cpp
    ├── DlgBugReport.h
    ├── DlgCheck.cpp
    ├── DlgCheck.h
    ├── DlgCloneGrid.cpp
    ├── DlgCloneGrid.h
    ├── DlgCloneObject.cpp
    ├── DlgCloneObject.h
    ├── DlgCloneRevolve.cpp
    ├── DlgCloneRevolve.h
    ├── DlgConvertFEBio.cpp
    ├── DlgConvertFEBio.h
    ├── DlgDIC.cpp
    ├── DlgDIC.h
    ├── DlgDetachSelection.cpp
    ├── DlgDetachSelection.h
    ├── DlgEditLConfigs.cpp
    ├── DlgEditLConfigs.h
    ├── DlgEditObject.cpp
    ├── DlgEditObject.h
    ├── DlgEditOutput.cpp
    ├── DlgEditOutput.h
    ├── DlgEditProject.cpp
    ├── DlgEditProject.h
    ├── DlgExplodedView.cpp
    ├── DlgExplodedView.h
    ├── DlgExportFEBio.cpp
    ├── DlgExportFEBio.h
    ├── DlgExportLSDYNA.cpp
    ├── DlgExportLSDYNA.h
    ├── DlgExportXPLT.cpp
    ├── DlgExportXPLT.h
    ├── DlgFEBioInfo.cpp
    ├── DlgFEBioInfo.h
    ├── DlgFEBioOptimize.cpp
    ├── DlgFEBioOptimize.h
    ├── DlgFEBioPlugins.cpp
    ├── DlgFEBioPlugins.h
    ├── DlgFiberViz.h
    ├── DlgFind.cpp
    ├── DlgFind.h
    ├── DlgFormula.cpp
    ├── DlgFormula.h
    ├── DlgImageFilter.cpp
    ├── DlgImageFilter.h
    ├── DlgImportData.cpp
    ├── DlgImportData.h
    ├── DlgImportLines.cpp
    ├── DlgImportLines.h
    ├── DlgImportXPLT.cpp
    ├── DlgImportXPLT.h
    ├── DlgKinemat.cpp
    ├── DlgKinemat.h
    ├── DlgLameConvertor.cpp
    ├── DlgLameConvertor.h
    ├── DlgLogin.cpp
    ├── DlgLogin.h
    ├── DlgMaterialTest.cpp
    ├── DlgMaterialTest.h
    ├── DlgMeasure.cpp
    ├── DlgMeasure.h
    ├── DlgMergeObjects.cpp
    ├── DlgMergeObjects.h
    ├── DlgMeshDiagnostics.cpp
    ├── DlgMeshDiagnostics.h
    ├── DlgModelInfo.cpp
    ├── DlgModelInfo.h
    ├── DlgNew.cpp
    ├── DlgNew.h
    ├── DlgNewProject.cpp
    ├── DlgNewProject.h
    ├── DlgPartViewer.cpp
    ├── DlgPartViewer.h
    ├── DlgPickColor.cpp
    ├── DlgPickColor.h
    ├── DlgPickNamedSelection.cpp
    ├── DlgPickNamedSelection.h
    ├── DlgPixelInspector.cpp
    ├── DlgPixelInspector.h
    ├── DlgPlaneCut.cpp
    ├── DlgPlaneCut.h
    ├── DlgPlotMix.cpp
    ├── DlgPlotMix.h
    ├── DlgPurge.cpp
    ├── DlgPurge.h
    ├── DlgRAWImport.cpp
    ├── DlgRAWImport.h
    ├── DlgRequestUploadPerm.cpp
    ├── DlgRequestUploadPerm.h
    ├── DlgRun.cpp
    ├── DlgRun.h
    ├── DlgScreenCapture.cpp
    ├── DlgScreenCapture.h
    ├── DlgSelectRange.cpp
    ├── DlgSelectRange.h
    ├── DlgSetRepoFolder.cpp
    ├── DlgSetRepoFolder.h
    ├── DlgSettings.cpp
    ├── DlgSettings.h
    ├── DlgSoluteTable.cpp
    ├── DlgSoluteTable.h
    ├── DlgStartThread.cpp
    ├── DlgStartThread.h
    ├── DlgStepViewer.cpp
    ├── DlgStepViewer.h
    ├── DlgTimeSettings.cpp
    ├── DlgTimeSettings.h
    ├── DlgTransform.cpp
    ├── DlgTransform.h
    ├── DlgUnitConverter.cpp
    ├── DlgUnitConverter.h
    ├── DlgWarpImage.cpp
    ├── DlgWarpImage.h
    ├── DlgWidgetProps.cpp
    ├── DlgWidgetProps.h
    ├── DocManager.cpp
    ├── DocManager.h
    ├── DocTemplate.cpp
    ├── DocTemplate.h
    ├── Document.cpp
    ├── Document.h
    ├── DragBox.cpp
    ├── DragBox.h
    ├── DynamicStackedWidget.h
    ├── EditDataFieldTool.cpp
    ├── EditDataFieldTool.h
    ├── EditPanel.cpp
    ├── EditPanel.h
    ├── EditVariableParam.cpp
    ├── EditVariableParam.h
    ├── ElementVolumeTool.cpp
    ├── ElementVolumeTool.h
    ├── Encrypter.cpp
    ├── Encrypter.h
    ├── ExportProjectWidget.cpp
    ├── ExportProjectWidget.h
    ├── ExtrudeMapTool.cpp
    ├── ExtrudeMapTool.h
    ├── FBSApplication.cpp
    ├── FBSApplication.h
    ├── FEBioDiagnostic.cpp
    ├── FEBioDiagnostic.h
    ├── FEBioJob.cpp
    ├── FEBioJob.h
    ├── FEBioJobManager.cpp
    ├── FEBioJobManager.h
    ├── FEBioOpt.cpp
    ├── FEBioOpt.h
    ├── FEBioStudio.cpp
    ├── FEBioStudio.h
    ├── FEBioStudio.pro
    ├── FEBioStudioProject.cpp
    ├── FEBioStudioProject.h
    ├── FEBioThread.cpp
    ├── FEBioThread.h
    ├── FEClassPropsView.cpp
    ├── FEClassPropsView.h
    ├── FEKinematFileReader.cpp
    ├── FEKinematFileReader.h
    ├── FEObjectProps.cpp
    ├── FEObjectProps.h
    ├── FiberGeneratorTool.cpp
    ├── FiberGeneratorTool.h
    ├── FiberODFWidget.cpp
    ├── FiberODFWidget.h
    ├── FileThread.cpp
    ├── FileThread.h
    ├── FileViewer.cpp
    ├── FileViewer.h
    ├── FindWidget.cpp
    ├── FindWidget.h
    ├── FlowLayout.cpp
    ├── FlowLayout.h
    ├── FoamGeneratorTool.cpp
    ├── FoamGeneratorTool.h
    ├── FocusWatcher.h
    ├── GGrid.cpp
    ├── GGrid.h
    ├── GIFAnimation.cpp
    ├── GIFAnimation.h
    ├── GLCanvas.cpp
    ├── GLCanvas.h
    ├── GLControlBar.cpp
    ├── GLControlBar.h
    ├── GLCursor.cpp
    ├── GLCursor.h
    ├── GLHighLighter.cpp
    ├── GLHighlighter.h
    ├── GLModelScene.cpp
    ├── GLModelScene.h
    ├── GLPlaneCut.cpp
    ├── GLPlaneCut.h
    ├── GLPostScene.cpp
    ├── GLPostScene.h
    ├── GLScene.cpp
    ├── GLScene.h
    ├── GLSceneView.cpp
    ├── GLSceneView.h
    ├── GLScreenRecorder.cpp
    ├── GLScreenRecorder.h
    ├── GLView.cpp
    ├── GLView.h
    ├── GLViewSelector.cpp
    ├── GLViewSelector.h
    ├── GLViewTransform.cpp
    ├── GLViewTransform.h
    ├── GLViewer.cpp
    ├── GLViewer.h
    ├── GManipulator.cpp
    ├── GManipulator.h
    ├── GTriad.cpp
    ├── GTriad.h
    ├── GraphData.cpp
    ├── GraphData.h
    ├── GraphWindow.cpp
    ├── GraphWindow.h
    ├── HelpDialog.cpp
    ├── HelpDialog.h
    ├── HelpUrl.cpp
    ├── HelpUrl.h
    ├── ICPRegistrationTool.cpp
    ├── ICPRegistrationTool.h
    ├── IconProvider.cpp
    ├── IconProvider.h
    ├── ImageFilterWidget.cpp
    ├── ImageFilterWidget.h
    ├── ImageMapTool.cpp
    ├── ImageMapTool.h
    ├── ImageSettingsPanel.cpp
    ├── ImageSettingsPanel.h
    ├── ImageSlice.cpp
    ├── ImageSlice.h
    ├── ImageSliceView.cpp
    ├── ImageSliceView.h
    ├── ImageThread.cpp
    ├── ImageThread.h
    ├── ImageToolBar.cpp
    ├── ImageToolBar.h
    ├── ImageViewSettings.cpp
    ├── ImageViewSettings.h
    ├── ImgAnimation.cpp
    ├── ImgAnimation.h
    ├── ImportSpringsTool.cpp
    ├── ImportSpringsTool.h
    ├── InfoPanel.cpp
    ├── InfoPanel.h
    ├── InputWidgets.cpp
    ├── InputWidgets.h
    ├── IntegrateWindow.cpp
    ├── IntegrateWindow.h
    ├── KinematBuildTool.cpp
    ├── KinematBuildTool.h
    ├── LaunchConfig.cpp
    ├── LaunchConfig.h
    ├── LinkPropertyEdit.cpp
    ├── LinkPropertyEdit.h
    ├── LocalDatabaseHandler.cpp
    ├── LocalDatabaseHandler.h
    ├── LocalJobProcess.cpp
    ├── LocalJobProcess.h
    ├── LogPanel.cpp
    ├── LogPanel.h
    ├── Logger.cpp
    ├── Logger.h
    ├── MPEGAnimation.cpp
    ├── MPEGAnimation.h
    ├── MainTabBar.cpp
    ├── MainTabBar.h
    ├── MainWindow.cpp
    ├── MainWindow.h
    ├── MaterialEditor.cpp
    ├── MaterialEditor.h
    ├── MaterialMapTool.cpp
    ├── MaterialMapTool.h
    ├── MaterialPanel.cpp
    ├── MaterialPanel.h
    ├── MaterialPropsView.cpp
    ├── MaterialPropsView.h
    ├── MeasureAreaTool.cpp
    ├── MeasureAreaTool.h
    ├── MeasureCOMTool.cpp
    ├── MeasureCOMTool.h
    ├── MeasureMOITool.cpp
    ├── MeasureMOITool.h
    ├── MeasureVolumeTool.cpp
    ├── MeasureVolumeTool.h
    ├── MeshButtonBox.cpp
    ├── MeshButtonBox.h
    ├── MeshInfoPanel.cpp
    ├── MeshInfoPanel.h
    ├── MeshInspector.cpp
    ├── MeshInspector.h
    ├── MeshMorphTool.cpp
    ├── MeshMorphTool.h
    ├── MeshPanel.cpp
    ├── MeshPanel.h
    ├── MeshToImageTool.cpp
    ├── MeshToImageTool.h
    ├── ModelDocument.cpp
    ├── ModelDocument.h
    ├── ModelFileReader.cpp
    ├── ModelFileReader.h
    ├── ModelFileWriter.cpp
    ├── ModelFileWriter.h
    ├── ModelPropsPanel.cpp
    ├── ModelPropsPanel.h
    ├── ModelSearch.cpp
    ├── ModelSearch.h
    ├── ModelTree.cpp
    ├── ModelTree.h
    ├── ModelTypeInfoReader.cpp
    ├── ModelTypeInfoReader.h
    ├── ModelViewer.cpp
    ├── ModelViewer.h
    ├── ModifierTool.cpp
    ├── ModifierTool.h
    ├── MultiLineLabel.cpp
    ├── MultiLineLabel.h
    ├── ObjectPanel.cpp
    ├── ObjectPanel.h
    ├── ObjectProps.cpp
    ├── ObjectProps.h
    ├── PRVArchive.cpp
    ├── PRVArchive.h
    ├── PixelInfoSource.cpp
    ├── PixelInfoSource.h
    ├── PlaneCutTool.cpp
    ├── PlaneCutTool.h
    ├── PlaneTool.cpp
    ├── PlaneTool.h
    ├── PlotWidget.cpp
    ├── PlotWidget.h
    ├── PointCongruencyTool.cpp
    ├── PointCongruencyTool.h
    ├── PointDistanceTool.cpp
    ├── PointDistanceTool.h
    ├── PostDataPanel.cpp
    ├── PostDataPanel.h
    ├── PostDocument.cpp
    ├── PostDocument.h
    ├── PostModelPanel.cpp
    ├── PostModelPanel.h
    ├── PostObject.cpp
    ├── PostObject.h
    ├── PostPanel.cpp
    ├── PostPanel.h
    ├── PostSessionFile.cpp
    ├── PostSessionFile.h
    ├── PostToolBar.cpp
    ├── PostToolBar.h
    ├── PropertyList.cpp
    ├── PropertyList.h
    ├── PropertyListForm.cpp
    ├── PropertyListForm.h
    ├── PropertyListView.cpp
    ├── PropertyListView.h
    ├── PublicationWidget.cpp
    ├── PublicationWidget.h
    ├── PublicationWidgetView.cpp
    ├── PublicationWidgetView.h
    ├── QuadricFitTool.cpp
    ├── QuadricFitTool.h
    ├── RangeSlider.cpp
    ├── RangeSlider.h
    ├── ReadCurveTool.cpp
    ├── ReadCurveTool.h
    ├── RepoConnectionHandler.cpp
    ├── RepoConnectionHandler.h
    ├── RepositoryPanel.cpp
    ├── RepositoryPanel.h
    ├── ResourceEdit.cpp
    ├── ResourceEdit.h
    ├── SSHHandler.cpp
    ├── SSHHandler.h
    ├── SSHThread.cpp
    ├── SSHThread.h
    ├── ScalarFieldTool.cpp
    ├── ScalarFieldTool.h
    ├── ScatterWindow.cpp
    ├── ScatterWindow.h
    ├── SelectNearPlaneTool.cpp
    ├── SelectNearPlaneTool.h
    ├── SelectionBox.cpp
    ├── SelectionBox.h
    ├── ServerSettings.cpp
    ├── ServerSettings.h
    ├── Sketcher.cpp
    ├── Sketcher.h
    ├── SphereFitTool.cpp
    ├── SphereFitTool.h
    ├── StatePanel.cpp
    ├── StatePanel.h
    ├── StatsWindow.cpp
    ├── StatsWindow.h
    ├── SummaryWindow.cpp
    ├── SummaryWindow.h
    ├── SurfaceMeshSizeTool.cpp
    ├── SurfaceMeshSizeTool.h
    ├── TagLabel.cpp
    ├── TagLabel.h
    ├── TetOverlapTool.cpp
    ├── TetOverlapTool.h
    ├── TextDocument.cpp
    ├── TextDocument.h
    ├── TimelinePanel.cpp
    ├── TimelinePanel.h
    ├── TimelineWidget.cpp
    ├── TimelineWidget.h
    ├── Tool.cpp
    ├── Tool.h
    ├── ToolBox.cpp
    ├── ToolBox.h
    ├── ToolParamsPanel.cpp
    ├── ToolParamsPanel.h
    ├── ToolsPanel.cpp
    ├── ToolsPanel.h
    ├── UnitParser.cpp
    ├── UnitParser.h
    ├── UpdateChecker.cpp
    ├── UpdateChecker.h
    ├── WebDefines.h
    ├── WrapLabel.cpp
    ├── WrapLabel.h
    ├── WzdUpload.cpp
    ├── WzdUpload.h
    ├── XMLCommands.cpp
    ├── XMLCommands.h
    ├── XMLDocument.cpp
    ├── XMLDocument.h
    ├── XMLEditor.cpp
    ├── XMLEditor.h
    ├── XMLTreeModel.cpp
    ├── XMLTreeModel.h
    ├── XMLTreeView.cpp
    ├── XMLTreeView.h
    ├── ZipFiles.cpp
    ├── ZipFiles.h
    ├── menuEdit.cpp
    ├── menuFEBio.cpp
    ├── menuFile.cpp
    ├── menuHelp.cpp
    ├── menuPhysics.cpp
    ├── menuPost.cpp
    ├── menuRecord.cpp
    ├── menuTools.cpp
    ├── menuView.cpp
    ├── menuXML.cpp
    ├── modelcheck.cpp
    ├── modelcheck.h
    ├── stdafx.cpp
    ├── stdafx.h
    ├── targetver.h
    ├── test.out
    ├── ui_buildpanel.h
    ├── ui_config.cpp
    ├── ui_config.h
    ├── ui_createpanel.h
    ├── ui_curveeditor.h
    ├── ui_editpanel.h
    ├── ui_logpanel.h
    ├── ui_mainwindow.cpp
    ├── ui_mainwindow.h
    ├── ui_materialeditor.h
    ├── ui_meshinspector.h
    ├── ui_meshpanel.h
    ├── ui_modelviewer.h
    ├── ui_repositorypanel.h
    ├── ui_toolspanel.h
    ├── units.cpp
    ├── units.h
    ├── version.h
    ├── welcomePage.cpp
    └── welcomePage.h
├── FEMLib
    ├── FEAnalysisStep.cpp
    ├── FEAnalysisStep.h
    ├── FEBase.h
    ├── FEBodyLoad.cpp
    ├── FEBodyLoad.h
    ├── FEBoundaryCondition.cpp
    ├── FEBoundaryCondition.h
    ├── FEConnector.cpp
    ├── FEConnector.h
    ├── FECoreMaterial.cpp
    ├── FECoreMaterial.h
    ├── FECoreModel.h
    ├── FEDOF.cpp
    ├── FEDOF.h
    ├── FEDataVariable.cpp
    ├── FEDataVariable.h
    ├── FEDiscreteMaterial.cpp
    ├── FEDiscreteMaterial.h
    ├── FEDomainComponent.cpp
    ├── FEDomainComponent.h
    ├── FEElementFormulation.cpp
    ├── FEElementFormulation.h
    ├── FEInitialCondition.cpp
    ├── FEInitialCondition.h
    ├── FEInterface.cpp
    ├── FEInterface.h
    ├── FELoad.cpp
    ├── FELoad.h
    ├── FELoadController.cpp
    ├── FELoadController.h
    ├── FEMKernel.cpp
    ├── FEMKernel.h
    ├── FEMaterial.cpp
    ├── FEMaterial.h
    ├── FEMaterialFactory.cpp
    ├── FEMaterialFactory.h
    ├── FEMaterialLibrary.cpp
    ├── FEMaterialLibrary.h
    ├── FEMeshAdaptor.cpp
    ├── FEMeshAdaptor.h
    ├── FEMeshDataGenerator.cpp
    ├── FEMeshDataGenerator.h
    ├── FEModelComponent.cpp
    ├── FEModelComponent.h
    ├── FEModelConstraint.cpp
    ├── FEModelConstraint.h
    ├── FEMultiMaterial.cpp
    ├── FEMultiMaterial.h
    ├── FERigidConstraint.cpp
    ├── FERigidConstraint.h
    ├── FERigidLoad.cpp
    ├── FERigidLoad.h
    ├── FESoluteData.cpp
    ├── FESoluteData.h
    ├── FEStepComponent.cpp
    ├── FEStepComponent.h
    ├── FESurfaceLoad.cpp
    ├── FESurfaceLoad.h
    ├── FEUserMaterial.cpp
    ├── FEUserMaterial.h
    ├── FSCoreBase.cpp
    ├── FSModel.cpp
    ├── FSModel.h
    ├── FSProject.cpp
    ├── FSProject.h
    ├── GDiscreteObject.cpp
    ├── GDiscreteObject.h
    ├── GMaterial.cpp
    ├── GMaterial.h
    ├── PlotDataSettings.cpp
    ├── PlotDataSettings.h
    └── stdafx.h
├── FSCore
    ├── Archive.cpp
    ├── Archive.h
    ├── CallTracer.cpp
    ├── CallTracer.h
    ├── ClassDescriptor.cpp
    ├── ClassDescriptor.h
    ├── FSCore.cpp
    ├── FSCore.h
    ├── FSCore.pro
    ├── FSDir.cpp
    ├── FSDir.h
    ├── FSLogger.cpp
    ├── FSLogger.h
    ├── FSObject.cpp
    ├── FSObject.h
    ├── FSObjectList.h
    ├── FSThreadedTask.cpp
    ├── FSThreadedTask.h
    ├── FileReader.cpp
    ├── FileReader.h
    ├── FileWriter.h
    ├── LoadCurve.cpp
    ├── LoadCurve.h
    ├── ParamBlock.cpp
    ├── ParamBlock.h
    ├── Serializable.cpp
    ├── Serializable.h
    ├── box.cpp
    ├── box.h
    ├── color.h
    ├── enum.h
    ├── math3d.h
    ├── memtool.cpp
    ├── memtool.h
    ├── stdafx.cpp
    └── stdafx.h
├── FindDependencies.cmake
├── GLLib
    ├── GDecoration.cpp
    ├── GDecoration.h
    ├── GLCamera.cpp
    ├── GLCamera.h
    ├── GLContext.cpp
    ├── GLContext.h
    ├── GLLib.pro
    ├── GLMesh.cpp
    ├── GLMesh.h
    ├── GLMeshRender.cpp
    ├── GLMeshRender.h
    ├── GLProgram.cpp
    ├── GLProgram.h
    ├── GLTexture1D.cpp
    ├── GLTexture1D.h
    ├── GLViewSettings.cpp
    ├── GLViewSettings.h
    ├── GView.cpp
    ├── GView.h
    ├── Interpolator.cpp
    ├── Interpolator.h
    ├── glx.cpp
    ├── glx.h
    └── stdafx.h
├── GLWLib
    ├── GLWLib.pro
    ├── GLWidget.cpp
    ├── GLWidget.h
    ├── GLWidgetManager.cpp
    ├── GLWidgetManager.h
    └── convert.h
├── GeomLib
    ├── FSGroup.cpp
    ├── FSGroup.h
    ├── GBaseObject.cpp
    ├── GBaseObject.h
    ├── GBox.cpp
    ├── GBoxInBox.cpp
    ├── GCone.cpp
    ├── GCurveMeshObject.cpp
    ├── GCurveMeshObject.h
    ├── GCurveObject.cpp
    ├── GCurveObject.h
    ├── GCylinder.cpp
    ├── GCylinderInBox.cpp
    ├── GDisc.cpp
    ├── GGroup.cpp
    ├── GGroup.h
    ├── GHexagon.cpp
    ├── GItem.cpp
    ├── GItem.h
    ├── GMeshObject.cpp
    ├── GMeshObject.h
    ├── GModel.cpp
    ├── GModel.h
    ├── GMultiBox.cpp
    ├── GMultiBox.h
    ├── GMultiPatch.cpp
    ├── GMultiPatch.h
    ├── GOCCObject.cpp
    ├── GOCCObject.h
    ├── GObject.cpp
    ├── GObject.h
    ├── GPartSection.cpp
    ├── GPartSection.h
    ├── GPatch.cpp
    ├── GPrimitive.cpp
    ├── GPrimitive.h
    ├── GQuartDogBone.cpp
    ├── GRing.cpp
    ├── GShellSphere.cpp
    ├── GShellTorus.cpp
    ├── GShellTube.cpp
    ├── GSlice.cpp
    ├── GSolidArc.cpp
    ├── GSphere.cpp
    ├── GSphereInBox.cpp
    ├── GSurfaceMeshObject.cpp
    ├── GSurfaceMeshObject.h
    ├── GTorus.cpp
    ├── GTruncatedEllipsoid.cpp
    ├── GTube.cpp
    ├── MeshLayer.cpp
    ├── MeshLayer.h
    ├── geom.cpp
    ├── geom.h
    ├── geomlib.cpp
    └── geomlib.h
├── ImageLib
    ├── 3DGradientMap.cpp
    ├── 3DGradientMap.h
    ├── 3DImage.cpp
    ├── 3DImage.h
    ├── DICOMImageSource.cpp
    ├── DICOMImageSource.h
    ├── FiberODF.cpp
    ├── FiberODF.h
    ├── FiberODFAnalysis.cpp
    ├── FiberODFAnalysis.h
    ├── Image.cpp
    ├── Image.h
    ├── ImageAnalysis.cpp
    ├── ImageAnalysis.h
    ├── ImageFilter.cpp
    ├── ImageFilter.h
    ├── ImageFilterSITK.cpp
    ├── ImageFilterSITK.h
    ├── ImageModel.cpp
    ├── ImageModel.h
    ├── ImageSource.cpp
    ├── ImageSource.h
    ├── RGBAImage.cpp
    ├── RGBAImage.h
    ├── RGBImage.cpp
    ├── RGBImage.h
    ├── SITKImageSource.cpp
    ├── SITKImageSource.h
    ├── SITKTools.cpp
    ├── SITKTools.h
    ├── TiffReader.cpp
    ├── TiffReader.h
    └── stdafx.h
├── LICENSE
├── LSDyna
    ├── LSDYNAModel.cpp
    ├── LSDYNAModel.h
    ├── LSDYNAexport.cpp
    ├── LSDYNAexport.h
    ├── LSDYNAimport.cpp
    ├── LSDYNAimport.h
    ├── LSDynaFile.cpp
    ├── LSDynaFile.h
    ├── LSDynaFileParser.cpp
    └── LSDynaFileParser.h
├── MeshIO
    ├── ArtisynthImport.cpp
    ├── ArtisynthImport.h
    ├── BREPImport.cpp
    ├── BREPImport.h
    ├── BYUExport.cpp
    ├── BYUExport.h
    ├── BYUimport.cpp
    ├── BYUimport.h
    ├── DXFimport.cpp
    ├── DXFimport.h
    ├── FSFileExport.cpp
    ├── FSFileExport.h
    ├── FSFileImport.cpp
    ├── FSFileImport.h
    ├── FluentExport.cpp
    ├── FluentExport.h
    ├── GMshExport.cpp
    ├── GMshExport.h
    ├── GMshImport.cpp
    ├── GMshImport.h
    ├── HMASCIIimport.cpp
    ├── HMASCIIimport.h
    ├── HyperSurfaceImport.cpp
    ├── HyperSurfaceImport.h
    ├── HypersurfaceExport.cpp
    ├── HypersurfaceExport.h
    ├── IDEASimport.cpp
    ├── IDEASimport.h
    ├── IGESFileImport.cpp
    ├── IGESFileImport.h
    ├── MeshExport.cpp
    ├── MeshExport.h
    ├── MeshImport.cpp
    ├── MeshImport.h
    ├── NASTRANimport.cpp
    ├── NASTRANimport.h
    ├── ObjImport.cpp
    ├── ObjImport.h
    ├── PLYExport.cpp
    ├── PLYExport.h
    ├── PLYImport.cpp
    ├── PLYImport.h
    ├── PRVObjectExport.cpp
    ├── PRVObjectExport.h
    ├── PRVObjectFormat.h
    ├── PRVObjectImport.cpp
    ├── PRVObjectImport.h
    ├── RAWToMeshImport.cpp
    ├── RAWToMeshImport.h
    ├── STEPImport.cpp
    ├── STEPImport.h
    ├── STLExport.cpp
    ├── STLExport.h
    ├── STLimport.cpp
    ├── STLimport.h
    ├── TetGenExport.cpp
    ├── TetGenExport.h
    ├── TetGenImport.cpp
    ├── TetGenImport.h
    ├── VTKExport.cpp
    ├── VTKExport.h
    ├── VTKImport.cpp
    ├── VTKImport.h
    ├── VTUImport.cpp
    ├── VTUImport.h
    ├── ViewpointExport.cpp
    ├── ViewpointExport.h
    └── stdafx.h
├── MeshLib
    ├── FECoreMesh.cpp
    ├── FECoreMesh.h
    ├── FECurveMesh.cpp
    ├── FECurveMesh.h
    ├── FEEdge.cpp
    ├── FEEdge.h
    ├── FEElement.cpp
    ├── FEElement.h
    ├── FEElementData.cpp
    ├── FEElementData.h
    ├── FEElementLibrary.cpp
    ├── FEElementLibrary.h
    ├── FEFace.cpp
    ├── FEFace.h
    ├── FEFaceEdgeList.cpp
    ├── FEFaceEdgeList.h
    ├── FEFindElement.cpp
    ├── FEFindElement.h
    ├── FEItem.h
    ├── FEItemList.h
    ├── FEItemListBuilder.cpp
    ├── FEItemListBuilder.h
    ├── FELineMesh.cpp
    ├── FELineMesh.h
    ├── FEMesh.cpp
    ├── FEMesh.h
    ├── FEMeshBase.cpp
    ├── FEMeshBase.h
    ├── FEMeshBuilder.cpp
    ├── FEMeshBuilder.h
    ├── FEMeshData.cpp
    ├── FEMeshData.h
    ├── FENode.cpp
    ├── FENode.h
    ├── FENodeData.cpp
    ├── FENodeData.h
    ├── FENodeEdgeList.cpp
    ├── FENodeEdgeList.h
    ├── FENodeElementList.cpp
    ├── FENodeElementList.h
    ├── FENodeFaceList.cpp
    ├── FENodeFaceList.h
    ├── FENodeNodeList.cpp
    ├── FENodeNodeList.h
    ├── FESurfaceData.cpp
    ├── FESurfaceData.h
    ├── FESurfaceMesh.cpp
    ├── FESurfaceMesh.h
    ├── GMesh.cpp
    ├── GMesh.h
    ├── IHasItemList.cpp
    ├── IHasItemList.h
    ├── Intersect.cpp
    ├── Intersect.h
    ├── LineMesh2D.cpp
    ├── LineMesh2D.h
    ├── MeshItem2D.h
    ├── MeshMetrics.cpp
    ├── MeshMetrics.h
    ├── MeshTools.cpp
    ├── MeshTools.h
    ├── Mesh_Data.cpp
    ├── Mesh_Data.h
    ├── TriMesh.cpp
    ├── TriMesh.h
    ├── TriMesh2D.h
    ├── enums.h
    ├── hex.h
    ├── integrate.cpp
    ├── penta.h
    ├── pyra.h
    ├── quad4.h
    ├── quad8.h
    ├── tet.h
    ├── tri3.h
    ├── triangulate.cpp
    └── triangulate.h
├── MeshTools
    ├── BivariatePolynomialSpline.cpp
    ├── BivariatePolynomialSpline.h
    ├── BivariateSpline.cpp
    ├── BivariateSpline.h
    ├── ConchoidFit.cpp
    ├── ConchoidFit.h
    ├── FEAdvancingFrontMesher2D.cpp
    ├── FEAdvancingFrontMesher2D.h
    ├── FEAutoPartition.cpp
    ├── FEAutoPartition.h
    ├── FEAxesCurvature.cpp
    ├── FEAxesCurvature.h
    ├── FEBoundaryLayerMesher.cpp
    ├── FEBoundaryLayerMesher.h
    ├── FEBox.cpp
    ├── FEBox.h
    ├── FEBoxInBox.cpp
    ├── FEBoxInBox.h
    ├── FECVDDecimationModifier.cpp
    ├── FECVDDecimationModifier.h
    ├── FECone.cpp
    ├── FECone.h
    ├── FECore.vcproj
    ├── FECreateShells.cpp
    ├── FECreateShells.h
    ├── FECurveIntersect.cpp
    ├── FECurveIntersect.h
    ├── FECurveIntersect2D.cpp
    ├── FECurveIntersect2D.h
    ├── FECurveMesher.cpp
    ├── FECurveMesher.h
    ├── FECylinder.cpp
    ├── FECylinder.h
    ├── FECylinderInBox.cpp
    ├── FECylinderInBox.h
    ├── FEDeleteElements.cpp
    ├── FEDiscardMesh.cpp
    ├── FEDiscardMesh.h
    ├── FEDomain.cpp
    ├── FEDomain.h
    ├── FEEdgeCollapse.cpp
    ├── FEEdgeCollapse.h
    ├── FEEdgeFlip.cpp
    ├── FEEdgeFlip.h
    ├── FEExtrudeEdges.cpp
    ├── FEExtrudeEdges.h
    ├── FEExtrudeFaces.cpp
    ├── FEExtrudeFaces.h
    ├── FEFillHole.cpp
    ├── FEFillHole.h
    ├── FEFillQuadHole.cpp
    ├── FEFillQuadHole.h
    ├── FEFixJaggedEdges.cpp
    ├── FEFixJaggedEdges.h
    ├── FEFixMesh.cpp
    ├── FEFixMesh.h
    ├── FEFixSurfaceMesh.cpp
    ├── FEFixSurfaceMesh.h
    ├── FEGeodesic.cpp
    ├── FEGeodesic.h
    ├── FEGregoryPatch.cpp
    ├── FEGregoryPatch.h
    ├── FEHex8ToHex20.cpp
    ├── FEHexSplitModifier.cpp
    ├── FEHollowSphere.cpp
    ├── FEHollowSphere.h
    ├── FEInflateMesh.cpp
    ├── FELinearToQuadratic.cpp
    ├── FELinearToQuadratic.h
    ├── FELoftMesher.cpp
    ├── FELoftMesher.h
    ├── FEMMGRemesh.cpp
    ├── FEMMGRemesh.h
    ├── FEMeshOverlap.cpp
    ├── FEMeshOverlap.h
    ├── FEMeshSmoothingModifier.cpp
    ├── FEMeshSmoothingModifier.h
    ├── FEMeshValuator.cpp
    ├── FEMeshValuator.h
    ├── FEMesher.cpp
    ├── FEMesher.h
    ├── FEModifier.cpp
    ├── FEModifier.h
    ├── FEMortarProjection.cpp
    ├── FEMortarProjection.h
    ├── FEMultiBlockMesh.cpp
    ├── FEMultiBlockMesh.h
    ├── FEMultiQuadMesh.cpp
    ├── FEMultiQuadMesh.h
    ├── FENNQuery.cpp
    ├── FENNQuery.h
    ├── FEPenta6ToTet4.cpp
    ├── FEPlaneCut.cpp
    ├── FEQuad4ToQuad8.cpp
    ├── FEQuartDogBone.cpp
    ├── FEQuartDogBone.h
    ├── FERefineSurface.cpp
    ├── FERefineSurface.h
    ├── FERevolveFaces.cpp
    ├── FERevolveFaces.h
    ├── FERezoneMesh.cpp
    ├── FESelection.cpp
    ├── FESelection.h
    ├── FEShellDisc.cpp
    ├── FEShellDisc.h
    ├── FEShellMesher.cpp
    ├── FEShellMesher.h
    ├── FEShellPatch.cpp
    ├── FEShellPatch.h
    ├── FEShellRing.cpp
    ├── FEShellRing.h
    ├── FEShellSphere.cpp
    ├── FEShellSphere.h
    ├── FEShellToSolid.cpp
    ├── FEShellToSolid.h
    ├── FEShellTorus.cpp
    ├── FEShellTorus.h
    ├── FEShellTube.cpp
    ├── FEShellTube.h
    ├── FESlice.cpp
    ├── FESlice.h
    ├── FESmoothMesh.cpp
    ├── FESmoothSurfaceMesh.cpp
    ├── FESmoothSurfaceMesh.h
    ├── FESolidArc.cpp
    ├── FESolidArc.h
    ├── FESphere.cpp
    ├── FESphere.h
    ├── FESphereInBox.cpp
    ├── FESphereInBox.h
    ├── FESplitModifier.cpp
    ├── FESplitModifier.h
    ├── FESurfaceIntersect.cpp
    ├── FESurfaceIntersect.h
    ├── FESurfaceModifier.cpp
    ├── FESurfaceModifier.h
    ├── FETet10ToTet4.cpp
    ├── FETet15ToTet4.cpp
    ├── FETet4ToHex8.cpp
    ├── FETet4ToTet10.cpp
    ├── FETet4ToTet15.cpp
    ├── FETet4ToTet20.cpp
    ├── FETet4ToTet5.cpp
    ├── FETetGenMesher.cpp
    ├── FETetGenMesher.h
    ├── FETetGenModifier.h
    ├── FETetSplitModifier.cpp
    ├── FETetgenModifier.cpp
    ├── FETorus.cpp
    ├── FETorus.h
    ├── FETri3ToTri6.cpp
    ├── FETruncatedEllipsoid.cpp
    ├── FETruncatedEllipsoid.h
    ├── FETube.cpp
    ├── FETube.h
    ├── FEWeldModifier.cpp
    ├── FEWeldModifier.h
    ├── FSCurveObjectMesher.cpp
    ├── FSCurveObjectMesher.h
    ├── FSTriMesh.cpp
    ├── FSTriMesh.h
    ├── FoamMesh.cpp
    ├── FoamMesh.h
    ├── GExtrudeModifier.cpp
    ├── GHollowSphere.cpp
    ├── GLMesher.cpp
    ├── GLMesher.h
    ├── GModifiedObject.cpp
    ├── GModifiedObject.h
    ├── GModifier.cpp
    ├── GModifier.h
    ├── GObject2D.cpp
    ├── GObject2D.h
    ├── GPLCObject.cpp
    ├── GPLCObject.h
    ├── GRevolveModifier.cpp
    ├── GSketch.cpp
    ├── GSketch.h
    ├── GWrapModifier.cpp
    ├── GradientMap.cpp
    ├── GradientMap.h
    ├── ICPRegistration.cpp
    ├── ICPRegistration.h
    ├── LaplaceSolver.cpp
    ├── LaplaceSolver.h
    ├── MeshTools.pro
    ├── NetGenMesher.cpp
    ├── NetGenMesher.h
    ├── NetGenOCCMesher.cpp
    ├── NetGenOCCMesher.h
    ├── NetGenSTLMesher.cpp
    ├── NetGenSTLMesher.h
    ├── Plane.cpp
    ├── Plane.h
    ├── PointCloud3d.cpp
    ├── PointCloud3d.h
    ├── Quadric.cpp
    ├── Quadric.h
    ├── QuadricFit.cpp
    ├── QuadricFit.h
    ├── ReadMe.txt
    ├── SphereFit.cpp
    ├── SphereFit.h
    ├── SpringGenerator.cpp
    ├── SpringGenerator.h
    ├── SurfaceDistance.cpp
    ├── SurfaceDistance.h
    ├── TetOverlap.cpp
    ├── TetOverlap.h
    ├── hex2tet.cpp
    ├── insertCurve.cpp
    ├── insertCurve.h
    ├── insertCurve2.cpp
    ├── insertCurve2.h
    ├── lut.cpp
    ├── previewlib.pro
    └── stdafx.h
├── Nike3D
    ├── NIKE3DExport.cpp
    ├── NIKE3DExport.h
    ├── NIKE3DImport.cpp
    ├── NIKE3DImport.h
    ├── NIKE3DProject.cpp
    └── NIKE3DProject.h
├── PostGL
    ├── GLColorMap.cpp
    ├── GLColorMap.h
    ├── GLCurveProbe.cpp
    ├── GLCurveProbe.h
    ├── GLDataMap.cpp
    ├── GLDataMap.h
    ├── GLDisplacementMap.cpp
    ├── GLDisplacementMap.h
    ├── GLIsoSurfacePlot.cpp
    ├── GLIsoSurfacePlot.h
    ├── GLLinePlot.cpp
    ├── GLLinePlot.h
    ├── GLMirrorPlane.cpp
    ├── GLMirrorPlane.h
    ├── GLModel.cpp
    ├── GLModel.h
    ├── GLMusclePath.cpp
    ├── GLMusclePath.h
    ├── GLParticleFlowPlot.cpp
    ├── GLParticleFlowPlot.h
    ├── GLPlane.cpp
    ├── GLPlane.h
    ├── GLPlaneCutPlot.cpp
    ├── GLPlaneCutPlot.h
    ├── GLPlot.cpp
    ├── GLPlot.h
    ├── GLPlotGroup.cpp
    ├── GLPlotGroup.h
    ├── GLPlotHelicalAxis.cpp
    ├── GLPlotHelicalAxis.h
    ├── GLPointPlot.cpp
    ├── GLPointPlot.h
    ├── GLPointProbe.cpp
    ├── GLPointProbe.h
    ├── GLRuler.cpp
    ├── GLRuler.h
    ├── GLSlicePLot.cpp
    ├── GLSlicePLot.h
    ├── GLStreamLinePlot.cpp
    ├── GLStreamLinePlot.h
    ├── GLTensorPlot.cpp
    ├── GLTensorPlot.h
    ├── GLVectorPlot.cpp
    ├── GLVectorPlot.h
    ├── GLVolumeFlowPlot.cpp
    ├── GLVolumeFlowPlot.h
    ├── LineDataModel.cpp
    ├── LineDataModel.h
    ├── PostGL.pro
    └── stdafx.h
├── PostLib
    ├── 3DImageSlicer.cpp
    ├── 3DImageSlicer.h
    ├── AbaqusExport.cpp
    ├── AbaqusExport.h
    ├── BYUExport.cpp
    ├── BYUExport.h
    ├── ColorMap.cpp
    ├── ColorMap.h
    ├── DataFilter.cpp
    ├── DataFilter.h
    ├── DataMap.cpp
    ├── DataMap.h
    ├── FEASCIIImport.cpp
    ├── FEASCIIImport.h
    ├── FEAreaCoverage.cpp
    ├── FEAreaCoverage.h
    ├── FEAsciiExport.cpp
    ├── FEAsciiExport.h
    ├── FEBioImport.cpp
    ├── FEBioImport.h
    ├── FECurvatureMap.cpp
    ├── FECurvatureMap.h
    ├── FEDataField.cpp
    ├── FEDataField.h
    ├── FEDataManager.cpp
    ├── FEDataManager.h
    ├── FEDistanceMap.cpp
    ├── FEDistanceMap.h
    ├── FEFEBioExport.cpp
    ├── FEFEBioExport.h
    ├── FEFileExport.cpp
    ├── FEFileExport.h
    ├── FEFileReader.cpp
    ├── FEFileReader.h
    ├── FEGroup.cpp
    ├── FEGroup.h
    ├── FEKinemat.cpp
    ├── FEKinemat.h
    ├── FELSDYNAExport.cpp
    ├── FELSDYNAExport.h
    ├── FELSDYNAPlot.cpp
    ├── FELSDYNAPlot.h
    ├── FELSDYNAimport.cpp
    ├── FELSDYNAimport.h
    ├── FEMathData.cpp
    ├── FEMathData.h
    ├── FEMeshData.cpp
    ├── FEMeshData.h
    ├── FEMeshData_T.h
    ├── FENikeExport.cpp
    ├── FENikeExport.h
    ├── FENikeImport.cpp
    ├── FENikeImport.h
    ├── FEPlotMix.cpp
    ├── FEPlotMix.h
    ├── FEPointCongruency.cpp
    ├── FEPointCongruency.h
    ├── FEPostMesh.cpp
    ├── FEPostMesh.h
    ├── FEPostModel.cpp
    ├── FEPostModel.h
    ├── FERAWImageReader.cpp
    ├── FERAWImageReader.h
    ├── FESTLimport.cpp
    ├── FESTLimport.h
    ├── FEState.cpp
    ├── FEState.h
    ├── FEStrainMap.cpp
    ├── FEStrainMap.h
    ├── FEU3DImport.cpp
    ├── FEU3DImport.h
    ├── FEVTKExport.cpp
    ├── FEVTKExport.h
    ├── FEVTKImport.cpp
    ├── GLImageRenderer.cpp
    ├── GLImageRenderer.h
    ├── GLObject.cpp
    ├── GLObject.h
    ├── GMeshImport.cpp
    ├── GMeshImport.h
    ├── ImageSlicer.cpp
    ├── ImageSlicer.h
    ├── MarchingCubes.cpp
    ├── MarchingCubes.h
    ├── Material.cpp
    ├── Material.h
    ├── PLYExport.cpp
    ├── PLYExport.h
    ├── Palette.cpp
    ├── Palette.h
    ├── PostLib.pro
    ├── PostView.cpp
    ├── PostView.h
    ├── U3DFile.cpp
    ├── U3DFile.h
    ├── VRMLExporter.cpp
    ├── VRMLExporter.h
    ├── VTKImport.h
    ├── ValArray.cpp
    ├── ValArray.h
    ├── VolumeRenderer.cpp
    ├── VolumeRenderer.h
    ├── constants.h
    ├── evaluate.cpp
    ├── evaluate.h
    ├── stdafx.h
    ├── tools.cpp
    └── tools.h
├── README.md
├── Updater
    ├── .gitignore
    ├── FEBioStudioUpdater.cpp
    ├── FEBioStudioUpdater.h
    ├── FEBioStudioUpdater.pro
    ├── FEBioStudioUpdater.qrc
    ├── MainWindow.cpp
    ├── MainWindow.h
    ├── Makefile
    ├── ZipThread.cpp
    ├── ZipThread.h
    ├── getapppath.cpp
    ├── images
    │   ├── FEBioStudio.png
    │   └── leftSide.png
    └── mvUtil.cpp
├── VTKLib
    ├── VTKFileReader.cpp
    ├── VTKFileReader.h
    ├── VTKLegacyFileReader.cpp
    ├── VTKLegacyFileReader.h
    ├── VTKModel.cpp
    ├── VTKModel.h
    ├── VTKTools.cpp
    ├── VTKTools.h
    ├── VTPFileReader.cpp
    ├── VTPFileReader.h
    ├── VTUFileReader.cpp
    └── VTUFileReader.h
├── XPLTLib
    ├── Makefile
    ├── stdafx.h
    ├── xpltArchive.cpp
    ├── xpltArchive.h
    ├── xpltFileExport.cpp
    ├── xpltFileExport.h
    ├── xpltFileReader.cpp
    ├── xpltFileReader.h
    ├── xpltReader.cpp
    ├── xpltReader.h
    ├── xpltReader2.cpp
    ├── xpltReader2.h
    ├── xpltReader3.cpp
    └── xpltReader3.h
├── Xcode
    ├── Abaqus
    │   └── Abaqus.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── Abaqus.xcscmblueprint
    ├── Ansys
    │   └── Ansys.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── Ansys.xcscmblueprint
    ├── CUILib
    │   └── CUILib.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── IDEWorkspaceChecks.plist
    ├── Comsol
    │   └── Comsol.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── Comsol.xcscmblueprint
    ├── FEBio
    │   └── FEBio.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── FEBio.xcscmblueprint
    ├── FEBioStudio.xcworkspace
    │   ├── contents.xcworkspacedata
    │   └── xcshareddata
    │   │   └── IDEWorkspaceChecks.plist
    ├── FEBioStudio
    │   ├── FEBioStudio.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │   │   └── contents.xcworkspacedata
    │   └── Supporting Files
    │   │   ├── Assets.xcassets
    │   │       ├── AppIcon.appiconset
    │   │       │   ├── Contents.json
    │   │       │   ├── FEBioStudio_1024.png
    │   │       │   ├── FEBioStudio_128.png
    │   │       │   ├── FEBioStudio_16.png
    │   │       │   ├── FEBioStudio_256-1.png
    │   │       │   ├── FEBioStudio_256.png
    │   │       │   ├── FEBioStudio_32-1.png
    │   │       │   ├── FEBioStudio_32.png
    │   │       │   ├── FEBioStudio_512-1.png
    │   │       │   ├── FEBioStudio_512.png
    │   │       │   └── FEBioStudio_64.png
    │   │       └── Contents.json
    │   │   ├── FEBioStudio.entitlements
    │   │   └── Info.plist
    ├── FEMLib
    │   └── FEMLib.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── FEMLib.xcscmblueprint
    ├── FSCore
    │   └── FSCore.xcodeproj
    │   │   └── project.pbxproj
    ├── GLLib
    │   └── GLLib.xcodeproj
    │   │   └── project.pbxproj
    ├── GLWLib
    │   └── GLWLib.xcodeproj
    │   │   ├── project.pbxproj
    │   │   ├── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       ├── xcshareddata
    │   │       │   └── GLWLib.xcscmblueprint
    │   │       └── xcuserdata
    │   │       │   └── brandon.xcuserdatad
    │   │       │       └── UserInterfaceState.xcuserstate
    │   │   └── xcuserdata
    │   │       └── brandon.xcuserdatad
    │   │           └── xcschemes
    │   │               ├── GLWLib.xcscheme
    │   │               └── xcschememanagement.plist
    ├── GeomLib
    │   └── GeomLib.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── GeomLib.xcscmblueprint
    ├── ImageLib
    │   └── ImageLib.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── IDEWorkspaceChecks.plist
    ├── LSDyna
    │   └── LSDyna.xcodeproj
    │   │   └── project.pbxproj
    ├── MathLib
    │   └── MathLib.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── MathLib.xcscmblueprint
    ├── MeshIO
    │   └── MeshIO.xcodeproj
    │   │   └── project.pbxproj
    ├── MeshLib
    │   └── MeshLib.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── MeshLib.xcscmblueprint
    ├── MeshTools
    │   └── MeshTools.xcodeproj
    │   │   └── project.pbxproj
    ├── Nike3D
    │   └── Nike3D.xcodeproj
    │   │   └── project.pbxproj
    ├── PostGL
    │   └── PostGL.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       └── contents.xcworkspacedata
    ├── PostLib
    │   └── PostLib.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       └── contents.xcworkspacedata
    ├── XML
    │   └── XML.xcodeproj
    │   │   ├── project.pbxproj
    │   │   └── project.xcworkspace
    │   │       ├── contents.xcworkspacedata
    │   │       └── xcshareddata
    │   │           └── XML.xcscmblueprint
    └── XPLTLib
    │   └── XPLTLib.xcodeproj
    │       ├── project.pbxproj
    │       └── project.xcworkspace
    │           └── contents.xcworkspacedata
├── build
    └── .gitignore
├── ci
    ├── Linux
    │   ├── build.sh
    │   ├── cmake.sh
    │   ├── febio.xml
    │   ├── git-safe.sh
    │   ├── publish-to-s3.sh
    │   ├── release.sh
    │   ├── scp-to-repo-release.sh
    │   └── scp-to-repo.sh
    ├── Windows
    │   ├── build.bat
    │   ├── febio.xml
    │   ├── publish-to-s3.sh
    │   ├── release.ps1
    │   ├── scp-to-repo-release.sh
    │   └── scp-to-repo.sh
    ├── common
    │   ├── linux
    │   │   ├── configure-ssh.sh
    │   │   ├── get-febio-sdk.sh
    │   │   └── publish-to-s3.sh
    │   └── windows
    │   │   └── get-febio-sdk.bat
    ├── installBuilder.xml
    └── macOS
    │   ├── Info.plist
    │   ├── build.sh
    │   ├── cmake.sh
    │   ├── febio.xml
    │   ├── git-safe.sh
    │   ├── postBuild.sh
    │   ├── publish-to-s3.sh
    │   ├── release.sh
    │   ├── scp-to-repo-release.sh
    │   └── scp-to-repo.sh
├── docker-compose.yml
├── febiostudio.qrc
├── icons
    ├── FEBioStudio.icns
    ├── FEBioStudio.png
    ├── FEBioStudio_large.png
    ├── Image.png
    ├── PostView.png
    ├── PreView.png
    ├── addtomodel.png
    ├── back.png
    ├── backface.png
    ├── bc.png
    ├── bend.png
    ├── bgimage.png
    ├── bottle.png
    ├── box.png
    ├── boxinbox.png
    ├── brush.png
    ├── chart.png
    ├── check.png
    ├── clear.png
    ├── clipboard.png
    ├── clock.png
    ├── clone.png
    ├── clonegrid.png
    ├── clonerevolve.png
    ├── collapse.png
    ├── collapse_neg.png
    ├── colormap.png
    ├── component.png
    ├── cone.png
    ├── contact.png
    ├── copy.png
    ├── curve.png
    ├── curves.png
    ├── cut.png
    ├── cylinder.png
    ├── cylinderinbox.png
    ├── cylpatch.png
    ├── delete.png
    ├── deleteRemote.png
    ├── delete_neg.png
    ├── deletepoint.png
    ├── deriv.png
    ├── deriv_neg.png
    ├── detach.png
    ├── disabled.png
    ├── disc.png
    ├── discrete.png
    ├── distort.png
    ├── document.png
    ├── dogbone.png
    ├── download.png
    ├── edit.png
    ├── ellipsoid.png
    ├── emblems
    │   ├── caution.png
    │   ├── check.png
    │   ├── error.png
    │   ├── minus.png
    │   ├── missing.png
    │   ├── plus.png
    │   └── warning.png
    ├── error.png
    ├── expand.png
    ├── expand_neg.png
    ├── explode.png
    ├── extract.png
    ├── extrude.png
    ├── eye.png
    ├── febio.png
    ├── febiorun.png
    ├── febiostudio.ico
    ├── flow.png
    ├── folder.png
    ├── font_bold.png
    ├── font_bold_neg.png
    ├── font_dec.png
    ├── font_dec_neg.png
    ├── font_inc.png
    ├── font_inc_neg.png
    ├── font_italic.png
    ├── font_italic_neg.png
    ├── formula.png
    ├── formula_neg.png
    ├── forward.png
    ├── geodesic.png
    ├── greyedOut.png
    ├── helix.png
    ├── hexagon.png
    ├── hide.png
    ├── hollowsphere.png
    ├── html.png
    ├── ic.png
    ├── ignore.png
    ├── imageslice.png
    ├── info.png
    ├── inspect.png
    ├── integrate.png
    ├── isosurface.png
    ├── light.png
    ├── list.png
    ├── load.png
    ├── loft.png
    ├── marching_cubes.png
    ├── material.png
    ├── measure.png
    ├── merge.png
    ├── mesh.png
    ├── mirror.png
    ├── musclepath.png
    ├── new.png
    ├── newpoint.png
    ├── next.png
    ├── open.png
    ├── openContaining.png
    ├── p2pline.png
    ├── particle.png
    ├── paste.png
    ├── pause.png
    ├── pdf.png
    ├── pickcolor.png
    ├── pivot.png
    ├── pixelInspector.png
    ├── play.png
    ├── prev.png
    ├── probe.png
    ├── properties.png
    ├── redo.png
    ├── refresh.png
    ├── rename.png
    ├── replace.png
    ├── replaceAll.png
    ├── replaceAll_neg.png
    ├── replace_neg.png
    ├── revolve.png
    ├── ring.png
    ├── rotate.png
    ├── ruler.png
    ├── save.png
    ├── scale.png
    ├── scroll_down.png
    ├── search.png
    ├── selEdge.png
    ├── selElem.png
    ├── selFace.png
    ├── selNode.png
    ├── select.png
    ├── selectAdd.png
    ├── selectCircle.png
    ├── selectCircle_neg.png
    ├── selectCurves.png
    ├── selectDel.png
    ├── selectFree.png
    ├── selectFree_neg.png
    ├── selectNodes.png
    ├── selectObject.png
    ├── selectPart.png
    ├── selectRect.png
    ├── selectRect_neg.png
    ├── selectSub.png
    ├── selectSurface.png
    ├── select_connected.png
    ├── select_hide.png
    ├── select_highlight.png
    ├── select_path.png
    ├── show.png
    ├── show_mesh.png
    ├── slice.png
    ├── sliceplot.png
    ├── snapshot.png
    ├── snaptogrid.png
    ├── snaptonode.png
    ├── solidarc.png
    ├── sphere.png
    ├── sphereinbox.png
    ├── splash.png
    ├── splash_hires.png
    ├── spring.png
    ├── square.png
    ├── step.png
    ├── streamlines.png
    ├── swap.png
    ├── sync.png
    ├── tensor.png
    ├── thintube.png
    ├── toggle_visible.png
    ├── torus.png
    ├── translate.png
    ├── tube.png
    ├── txt.png
    ├── undo.png
    ├── up.png
    ├── upload.png
    ├── vectors.png
    ├── video.png
    ├── view.png
    ├── volrender.png
    ├── warning.png
    ├── wire.png
    ├── zoom-fit-best-2.png
    ├── zoom_all.png
    ├── zoom_fit.png
    ├── zoom_select.png
    ├── zoom_x.png
    └── zoom_y.png
└── set_icon.cmake


/.github/workflows/linux-pull-request.yml:
--------------------------------------------------------------------------------
 1 | name: CI - Linux Pull Request
 2 | on:
 3 |   pull_request_target:
 4 |     types:
 5 |       - opened
 6 |       - edited
 7 |       - synchronize
 8 |     branches:
 9 |       - 'develop'
10 | permissions:
11 |   id-token: write # This is required for requesting the JWT
12 |   contents: read  # This is required for actions/checkout
13 | jobs:
14 |   call_workflow:
15 |     uses: febiosoftware/febio-workflows/.github/workflows/linux-reusable-pull-request.yml@develop
16 |     with:
17 |       aws-ami-id: ami-05f23270883f04ec8
18 |       aws-sg-id: sg-0ca7912782cf1538b
19 |       aws-instance-type: c5a.8xlarge
20 |       package-name: febio-studio
21 |       requires-sdk: true
22 |     secrets: inherit
23 | 


--------------------------------------------------------------------------------
/.github/workflows/linux-push.yml:
--------------------------------------------------------------------------------
 1 | name: CI - Linux Push
 2 | 
 3 | on:
 4 |   workflow_dispatch:
 5 |   push:
 6 |     branches:
 7 |       - develop
 8 |       - febiostudio3
 9 | permissions:
10 |   id-token: write # This is required for requesting the JWT
11 |   contents: read  # This is required for actions/checkout
12 | jobs:
13 |   call_workflow:
14 |     uses: febiosoftware/febio-workflows/.github/workflows/linux-reusable-push.yml@develop
15 |     with:
16 |       aws-ami-id: ami-05f23270883f04ec8
17 |       aws-sg-id: sg-0ca7912782cf1538b
18 |       runTests: false
19 |       package-name: febio-studio
20 |       requires-sdk: true
21 |     secrets: inherit
22 | 


--------------------------------------------------------------------------------
/.github/workflows/linux-release.yml:
--------------------------------------------------------------------------------
 1 | name: CI - Linux Release
 2 | 
 3 | on:
 4 |   workflow_dispatch:
 5 |   repository_dispatch:
 6 |     types: [release-published]
 7 | 
 8 | permissions:
 9 |   id-token: write # This is required for requesting the JWT
10 |   contents: read  # This is required for actions/checkout
11 | 
12 | jobs:
13 |   call_workflow:
14 |     uses: febiosoftware/febio-workflows/.github/workflows/linux-release.yml@develop
15 |     with:
16 |       aws-ami-id: ami-05f23270883f04ec8
17 |       aws-sg-id: sg-0ca7912782cf1538b
18 |     secrets: inherit
19 | 


--------------------------------------------------------------------------------
/.github/workflows/macOS-release.yml:
--------------------------------------------------------------------------------
 1 | name: CI - macOS Release
 2 | 
 3 | on:
 4 |   workflow_dispatch:
 5 |   repository_dispatch:
 6 |     types: [release-published]
 7 | 
 8 | jobs:
 9 |   call_workflow:
10 |     uses: febiosoftware/febio-workflows/.github/workflows/macos-release.yml@develop
11 |     secrets: inherit
12 | 


--------------------------------------------------------------------------------
/.github/workflows/macos-pull-request.yml:
--------------------------------------------------------------------------------
 1 | name: CI - macOS Pull Request
 2 | on:
 3 |   pull_request_target:
 4 |     types:
 5 |       - opened
 6 |       - edited
 7 |       - synchronize
 8 |     branches:
 9 |       - 'develop'
10 | permissions:
11 |   id-token: write # This is required for requesting the JWT
12 |   contents: read  # This is required for actions/checkout
13 | jobs:
14 |   call_workflow:
15 |     uses: febiosoftware/febio-workflows/.github/workflows/macos-reusable-pull-request.yml@develop
16 |     with:
17 |       package-name: febio-studio
18 |       requires-sdk: true
19 |       sdk-config: |
20 |         {
21 |           "sdk_path": "develop",
22 |           "version": "v4.6",
23 |         }
24 |     secrets: inherit
25 | 


--------------------------------------------------------------------------------
/.github/workflows/macos-push.yml:
--------------------------------------------------------------------------------
 1 | name: CI - macOS Push
 2 | 
 3 | on:
 4 |   workflow_dispatch:
 5 |   push:
 6 |     branches:
 7 |       - develop
 8 |       - febiostudio3
 9 | permissions:
10 |   id-token: write # This is required for requesting the JWT
11 |   contents: read  # This is required for actions/checkout
12 | 
13 | jobs:
14 |   call_workflow:
15 |     uses: febiosoftware/febio-workflows/.github/workflows/macos-reusable-push.yml@develop
16 |     with:
17 |       package-name: febio-studio
18 |       requires-sdk: true
19 |       post-build: true
20 |     secrets: inherit
21 | 


--------------------------------------------------------------------------------
/.github/workflows/windows-pull-request.yml:
--------------------------------------------------------------------------------
 1 | name: CI - Windows Pull Request
 2 | on:
 3 |   pull_request_target:
 4 |     types:
 5 |       - opened
 6 |       - edited
 7 |       - synchronize
 8 |     branches:
 9 |       - 'develop'
10 | permissions:
11 |   id-token: write # This is required for requesting the JWT
12 |   contents: read  # This is required for actions/checkout
13 | jobs:
14 |   call_workflow:
15 |     uses: febiosoftware/febio-workflows/.github/workflows/windows-reusable-pull-request.yml@develop
16 |     with:
17 |       register-runner-timeout: 10
18 |       aws-ami-id: ami-0f458bdce73864228
19 |       aws-sg-id: sg-0ca7912782cf1538b
20 |       aws-instance-type: c5a.8xlarge
21 |       package-name: febio-studio
22 |       requires-sdk: true
23 |     secrets: inherit
24 | 


--------------------------------------------------------------------------------
/.github/workflows/windows-push.yml:
--------------------------------------------------------------------------------
 1 | name: CI - Windows Push
 2 | 
 3 | on:
 4 |   workflow_dispatch:
 5 |   push:
 6 |     branches:
 7 |       - develop
 8 |       - febiostudio3
 9 | permissions:
10 |   id-token: write # This is required for requesting the JWT
11 |   contents: read  # This is required for actions/checkout
12 | jobs:
13 |   call_workflow:
14 |     uses: febiosoftware/febio-workflows/.github/workflows/windows-reusable-push.yml@develop
15 |     with:
16 |       aws-ami-id: ami-0f458bdce73864228
17 |       aws-sg-id: sg-0ca7912782cf1538b
18 |       aws-instance-type: c5a.8xlarge
19 |       runTests: false
20 |       package-name: febio-studio
21 |       requires-sdk: true
22 |     secrets: inherit
23 | 


--------------------------------------------------------------------------------
/.github/workflows/windows-release.yml:
--------------------------------------------------------------------------------
 1 | name: CI - Windows Release
 2 | 
 3 | on:
 4 |   workflow_dispatch:
 5 |   repository_dispatch:
 6 |     types: [release-published]
 7 | 
 8 | permissions:
 9 |   id-token: write # This is required for requesting the JWT
10 |   contents: read  # This is required for actions/checkout
11 | 
12 | jobs:
13 |   call_workflow:
14 |     uses: febiosoftware/febio-workflows/.github/workflows/windows-release.yml@develop
15 |     with:
16 |       aws-ami-id: ami-0f458bdce73864228
17 |       aws-sg-id: sg-0ca7912782cf1538b
18 |     secrets: inherit
19 | 


--------------------------------------------------------------------------------
/CUILib/CUILib.pro:
--------------------------------------------------------------------------------
 1 | TEMPLATE = lib
 2 | TARGET = cuilib
 3 | DESTDIR = ../build/lib
 4 | CONFIG += debug c++14 staticlib warn_off 
 5 | QMAKE_CXX = g++
 6 | QMAKE_CXXFLAGS += -std=c++14 -O0
 7 | DEFINES += LINUX HAS_QUAZIP HAS_SSH HAS_OCC TETLIBRARY HAS_NETGEN FFMPEG
 8 | INCLUDEPATH += ../
 9 | QT += widgets
10 | 
11 | # Input
12 | HEADERS += *.h
13 | SOURCES = $$files(*.cpp)
14 | SOURCES -= $$files(moc_*.cpp)
15 | 


--------------------------------------------------------------------------------
/CUILib/stdafx.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 
29 | //#include "targetver.h"
30 | 
31 | #include <stdio.h>
32 | 
33 | #ifdef WIN32
34 | #include <tchar.h>
35 | #endif
36 | 
37 | 


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/Documentation/Doxygen/index.dox:
--------------------------------------------------------------------------------
 1 | /**
 2 | \mainpage FEBio Studio Developer's Manual
 3 | The FEBio Studio Developer's Manual contains articles on how to extend the capabilities of set of FEBio Studio. 
 4 | 
 5 | The following links can be used to learn more about specific topics. 
 6 | 
 7 | \li \subpage mesh_inspector
 8 | \li \subpage post_add_datafield
 9 | 
10 | The FEBio software is developed at the Musculoskeletal Research Laboratories at the University of Utah and at the Musculoskeletal Biomechanics Laboratory at Columbia University.
11 | 
12 | All rights reserved. Copyright (c) 2006 - 2023
13 | */
14 | 


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/Documentation/helpDiscrepancies.txt:
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 1 | No corresponding help:
 2 | FEFiberGeneratorLocal
 3 | FEFiberGeneratorVector
 4 | FENaturalNeoHookean
 5 | FEIncompNeoHookean
 6 | FEGasserOgdenHolzapfelUC
 7 | FELinearOrthotropic
 8 | FEIsotropicFourier
 9 | FEFiberExpLinear
10 | FEFiberExpLinearUncoupled
11 | FEFDDvonMises3d
12 | FEDCSimoUC
13 | FEDCStrainEnergyDensityUC
14 | FEDCSpecificStrainEnergyUC
15 | FEDCvonMisesStressUC
16 | FEDCMaxShearStressUC
17 | FEDCMaxNormalStressUC
18 | FEDCMaxNormalLagrangeStrainUC
19 | FEEPIdealGas
20 | FEEPIdealFluid
21 | FEEPNeoHookeanFluid
22 | FEPrestrainConstGradient
23 | FEPrestrainInSituGradient
24 | 
25 | No corresponding material:
26 | Referentially_Orthotropic_Diffusivity
27 | Materials_Continuous_Fiber_Distribution_Fibers_Fiber_with_Toe_Linear_Response
28 | 
29 | Unsure:
30 | FEPRLig
31 | FEActiveContraction
32 | FE2DTransIsoMooneyRivlin
33 | 
34 | Notes:
35 | EFD material pages don't have any info on EFD directly.
36 | CFD schemes point to the same article for both coupled and uncoupled types.
37 | "CFD" is used to refer to both "Continuous Fiber Distribution" and "Cumulative Distribution Functions"
38 | 
39 | 


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/FEBio/stdafx.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 
29 | 


--------------------------------------------------------------------------------
/FEBioLink/FEBioInit.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | #pragma once
27 | 
28 | class FSProject;
29 | 
30 | namespace FEBio {
31 | 	void InitFEBioLibrary();
32 | 
33 | 	bool ConfigureFEBio(const char* szfilename);
34 | }
35 | 


--------------------------------------------------------------------------------
/FEBioLink/FEBioModule.cpp:
--------------------------------------------------------------------------------
1 | #include "FEBioModule.h"
2 | 
3 | 


--------------------------------------------------------------------------------
/FEBioLink/FEBioModule.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include <vector>
 3 | #include <string>
 4 | 
 5 | class FSModel;
 6 | 
 7 | namespace FEBio {
 8 | 
 9 | 	struct FEBioModule
10 | 	{
11 | 		const char* m_szname;
12 | 		const char* m_szdesc;
13 | 		int				m_id;
14 | 	};
15 | 
16 | 	std::vector<FEBioModule> GetAllModules();
17 | 
18 | 	const char* GetModuleName(int moduleId);
19 | 	int GetModuleId(const std::string& moduleName);
20 | 
21 | 	void SetActiveModule(int moduleID);
22 | 	int GetActiveModule();
23 | 	const char* GetActiveModuleName();
24 | 
25 | 	int SetActiveModule(const char* szmoduleName);
26 | 
27 | 	void InitFSModel(FSModel& fem);
28 | 
29 | 	void BlockCreateEvents(bool b);
30 | }
31 | 


--------------------------------------------------------------------------------
/FEBioStudio/DlgRequestUploadPerm.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | 
 3 | #include <QDialog>
 4 | 
 5 | namespace Ui {
 6 | 	class CDlgRequestUploadPerm;
 7 | }
 8 | 
 9 | class CDlgRequestUploadPerm : public QDialog
10 | {
11 | 	Q_OBJECT
12 | 
13 | public:
14 | 	CDlgRequestUploadPerm(QWidget* parent = nullptr);
15 | 
16 | 	QString getEmail();
17 | 	QString getOrg();
18 | 	QString getDescription();
19 | 
20 | 	void accept() override;
21 | 
22 | private:
23 | 	Ui::CDlgRequestUploadPerm* ui;
24 | };
25 | 


--------------------------------------------------------------------------------
/FEBioStudio/EditVariableParam.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include <QComboBox>
 3 | 
 4 | class Param;
 5 | 
 6 | //-----------------------------------------------------------------------------
 7 | class CEditVariableParam : public QComboBox
 8 | {
 9 | 	Q_OBJECT
10 | 
11 | public:
12 | 	CEditVariableParam(QWidget* parent = nullptr);
13 | 
14 | 	void setParam(Param* p);
15 | 
16 | public slots:
17 | 	void onCurrentIndexChanged(int index);
18 | 	void onEditTextChanged(const QString& txt);
19 | 
20 | signals:
21 | 	void typeChanged();
22 | 
23 | private:
24 | 	Param* m_param;
25 | };
26 | 
27 | 


--------------------------------------------------------------------------------
/FEBioStudio/FEKinematFileReader.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include <FSCore/FileReader.h>
 3 | 
 4 | class CPostDocument;
 5 | class FEKinemat;
 6 | 
 7 | class FEKinematFileReader : public FileReader
 8 | {
 9 | public:
10 | 	FEKinematFileReader(CPostDocument* doc);
11 | 	~FEKinematFileReader();
12 | 	bool Load(const char* szfile) override;
13 | 
14 | 	void SetModelFile(const std::string& modelFile);
15 | 	void SetKineFile(const std::string& kineFile);
16 | 	void SetRange(int rngMin, int rngMax, int rngStep);
17 | 
18 | 	float GetFileProgress() const override;
19 | 
20 | public:
21 | 	std::string GetModelFile() const;
22 | 	std::string GetKineFile() const;
23 | 	int GetMin() const;
24 | 	int GetMax() const;
25 | 	int GetStep() const;
26 | 
27 | private:
28 | 	std::string	m_modelFile;
29 | 	std::string	m_kineFile;
30 | 	int	m_min, m_max, m_step;
31 | 
32 | private:
33 | 	FEKinemat*		m_kine;
34 | 	CPostDocument* m_doc;
35 | };
36 | 


--------------------------------------------------------------------------------
/FEBioStudio/FlowLayout.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | 
 3 | #include <QLayout>
 4 | #include <QStyle>
 5 | 
 6 | class FlowLayout : public QLayout
 7 | {
 8 | public:
 9 |     explicit FlowLayout(QWidget *parent, int margin = -1, int hSpacing = -1, int vSpacing = -1);
10 |     explicit FlowLayout(int margin = -1, int hSpacing = -1, int vSpacing = -1);
11 |     ~FlowLayout();
12 | 
13 |     void addItem(QLayoutItem *item) override;
14 |     int horizontalSpacing() const;
15 |     int verticalSpacing() const;
16 |     Qt::Orientations expandingDirections() const override;
17 |     bool hasHeightForWidth() const override;
18 |     int heightForWidth(int) const override;
19 |     int count() const override;
20 |     QLayoutItem *itemAt(int index) const override;
21 |     QSize minimumSize() const override;
22 |     void setGeometry(const QRect &rect) override;
23 |     QSize sizeHint() const override;
24 |     QLayoutItem *takeAt(int index) override;
25 | 
26 | private:
27 |     int doLayout(const QRect &rect, bool testOnly) const;
28 |     int smartSpacing(QStyle::PixelMetric pm) const;
29 | 
30 |     QList<QLayoutItem *> itemList;
31 |     int m_hSpace;
32 |     int m_vSpace;
33 | };
34 | 


--------------------------------------------------------------------------------
/FEBioStudio/HelpUrl.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #include <string>
28 | 
29 | #define UNSELECTED_HELP "unselected_help"
30 | 
31 | const char* GetHelpURL(int superID, std::string typeString);


--------------------------------------------------------------------------------
/FEBioStudio/WrapLabel.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | 
 3 | #include <QWidget>
 4 | #include <QLabel>
 5 | #include <vector>
 6 | 
 7 | class QVBoxLayout;
 8 | 
 9 | class WrapLabel : public QWidget
10 | {
11 | public:
12 | 	WrapLabel(QString text = "", QWidget* parent = nullptr);
13 | 
14 | 	virtual void setText(QString text);
15 | 
16 | 	virtual QString text();
17 | 
18 | protected:
19 | 	void resizeEvent(QResizeEvent *event) override;
20 | 	void setLengths();
21 | 
22 | protected:
23 | 	QVBoxLayout* layout;
24 | 
25 | 	QString fullString;
26 | 	std::vector<QStringList> words;
27 | 	std::vector<std::vector<int>> lengths;
28 | 	std::vector<QLabel*> labels;
29 | 	int spaceSize;
30 | 	bool processEvent;
31 | 
32 | private:
33 | 	virtual void reflow(int width);
34 | 	virtual void addLabel(QString& text);
35 | };
36 | 


--------------------------------------------------------------------------------
/FEBioStudio/XMLEditor.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include <QPlainTextEdit>
 3 | 
 4 | class CMainWindow;
 5 | 
 6 | class XMLEditor : public QPlainTextEdit
 7 | {
 8 | 	Q_OBJECT
 9 | 
10 | public:
11 | 	XMLEditor(CMainWindow* parent);
12 | 
13 | 	void lineNumberAreaPaintEvent(QPaintEvent* event);
14 | 	int lineNumberAreaWidth();
15 | 
16 | 	void SetDocument(QTextDocument* doc, const QString& title = "");
17 | 
18 | 	void toggleLineComment();
19 | 	void duplicateLine();
20 | 	void deleteLine();
21 | 
22 | protected:
23 | 	void resizeEvent(QResizeEvent* event);
24 | 	void paintEvent(QPaintEvent* event);
25 | 
26 | private slots:
27 | 	void updateLineNumberAreaWidth(int newBlockCount);
28 | 	void highlightCurrentLine();
29 | 	void updateLinearNumberArea(const QRect&, int);
30 | 
31 | private:
32 | 	CMainWindow*		m_wnd;
33 | 	QWidget*			lineNumberArea;
34 | 	QPair<int, int>		m_countCache;
35 | };
36 | 
37 | class LineNumberArea : public QWidget
38 | {
39 | public:
40 | 	LineNumberArea(XMLEditor* editor) : QWidget(editor){ codeEditor = editor; }
41 | 
42 | 	QSize sizeHint() const 
43 | 	{
44 | 		return QSize(codeEditor->lineNumberAreaWidth(), 0);
45 | 	}
46 | 
47 | protected:
48 | 	void paintEvent(QPaintEvent* event)
49 | 	{
50 | 		codeEditor->lineNumberAreaPaintEvent(event);
51 | 	}
52 | 
53 | private:
54 | 	XMLEditor*	codeEditor;
55 | };
56 | 


--------------------------------------------------------------------------------
/FEMLib/FECoreModel.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include <FSCore/FSObject.h>
 3 | 
 4 | //-----------------------------------------------------------------------------
 5 | // base class for model classes
 6 | class FSCoreModel : public FSObject
 7 | {
 8 | public:
 9 | 	FSCoreModel(){}
10 | 	~FSCoreModel(){}
11 | };
12 | 


--------------------------------------------------------------------------------
/FEMLib/FEDomainComponent.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include "FEStepComponent.h"
 3 | #include <MeshLib/IHasItemList.h>
 4 | 
 5 | class FSModel;
 6 | class FEItemListBuilder;
 7 | 
 8 | //-----------------------------------------------------------------------------
 9 | // Base class for anything applied to a partition of the model's geometry.
10 | // This includes, boundary conditions, nodal loads, surface loads, body loads,
11 | // constraints, etc.
12 | class FSDomainComponent : public FSStepComponent, public FSHasOneItemList
13 | {
14 | public:
15 | 	enum { NAME, PARAMS, LIST, STEP, SELECTION_TYPE, LIST_ID, STATUS };
16 | 
17 | public:
18 | 	FSDomainComponent(int ntype, FSModel* ps, int nstep = 0);
19 | 	FSDomainComponent(int ntype, FSModel* ps, FEItemListBuilder* pi, int nstep = 0);
20 | 
21 | 	virtual ~FSDomainComponent(void);
22 | 
23 | 	int Type() { return m_ntype; }
24 | 
25 | 	void Save(OArchive& ar);
26 | 	void Load(IArchive& ar);
27 | 
28 | protected:
29 | 	int			m_ntype;	// type of boundary condition
30 | };
31 | 
32 | //---------------------------------------------------------------------------------------------
33 | // This class is used to select mesh selections properties
34 | class FSMeshSelection : public FSModelComponent, public FSHasOneItemList
35 | {
36 | 	enum {LIST_ID};
37 | 
38 | public:
39 | 	FSMeshSelection(FSModel* fem);
40 | 
41 | 	void Save(OArchive& ar);
42 | 	void Load(IArchive& ar);
43 | };
44 | 


--------------------------------------------------------------------------------
/FEMLib/FEElementFormulation.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include "FEModelComponent.h"
 3 | 
 4 | class FSModel;
 5 | 
 6 | class FEElementFormulation : public FSModelComponent
 7 | {
 8 | public:
 9 | 	FEElementFormulation(FSModel*);
10 | };
11 | 
12 | class FESolidFormulation : public FEElementFormulation 
13 | {
14 | public: 
15 | 	FESolidFormulation(FSModel*);
16 | 
17 | public:
18 | 	void Save(OArchive& ar) override;
19 | 	void Load(IArchive& ar) override;
20 | };
21 | 
22 | class FEShellFormulation : public FEElementFormulation 
23 | {
24 | public: 
25 | 	FEShellFormulation(FSModel*);
26 | 
27 | public:
28 | 	void Save(OArchive& ar) override;
29 | 	void Load(IArchive& ar) override;
30 | };
31 | 
32 | class FEBeamFormulation : public FEElementFormulation
33 | {
34 | public:
35 | 	FEBeamFormulation(FSModel*);
36 | 
37 | public:
38 | 	void Save(OArchive& ar) override;
39 | 	void Load(IArchive& ar) override;
40 | };
41 | 


--------------------------------------------------------------------------------
/FEMLib/FEMaterialLibrary.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include "FEMaterial.h"
 3 | #include <FSCore/Archive.h>
 4 | 
 5 | class FEMaterialLibrary  
 6 | {
 7 | 	enum { ML_VERSION = 2 };
 8 | 
 9 | public:
10 | 	struct MATENTRY
11 | 	{
12 | 		FSMaterial*	m_pmat;
13 | 		char		m_szname[256];
14 | 	};
15 | 
16 | public:
17 | 	FEMaterialLibrary();
18 | 	virtual ~FEMaterialLibrary();
19 | 
20 | 	bool Load(IArchive& ar);
21 | 	bool Save(OArchive& ar);
22 | 
23 | 	int Materials() { return (int)m_mat.size(); }
24 | 
25 | 	void Add(const char* sz, FSMaterial* pmat);
26 | 
27 | 	FSMaterial* Material(int i) { return m_mat[i].m_pmat; }
28 | 	const char* MaterialName(int i) { return m_mat[i].m_szname; }
29 | 
30 | protected:
31 | 	void Clear();
32 | 
33 | protected:
34 | 	std::vector<MATENTRY>	m_mat;
35 | };
36 | 


--------------------------------------------------------------------------------
/FEMLib/FEMeshAdaptor.cpp:
--------------------------------------------------------------------------------
 1 | #include "stdafx.h"
 2 | #include "FEMeshAdaptor.h"
 3 | #include <MeshLib/FEItemListBuilder.h>
 4 | 
 5 | FSMeshAdaptor::FSMeshAdaptor(FSModel* fem, int ntype) : FSDomainComponent(ntype, fem)
 6 | {
 7 | 	m_ntype = ntype;
 8 | 	SetSuperClassID(FEMESHADAPTOR_ID);
 9 | 	SetMeshItemType(FE_ELEM_FLAG);
10 | }
11 | 
12 | FEBioMeshAdaptor::FEBioMeshAdaptor(FSModel* fem) : FSMeshAdaptor(fem, FE_FEBIO_MESH_ADAPTOR)
13 | {
14 | 
15 | }
16 | 
17 | void FEBioMeshAdaptor::Save(OArchive& ar)
18 | {
19 | 	ar.BeginChunk(CID_FEBIO_META_DATA);
20 | 	{
21 | 		SaveClassMetaData(this, ar);
22 | 	}
23 | 	ar.EndChunk();
24 | 
25 | 	ar.BeginChunk(CID_FEBIO_BASE_DATA);
26 | 	{
27 | 		FSMeshAdaptor::Save(ar);
28 | 	}
29 | 	ar.EndChunk();
30 | }
31 | 
32 | void FEBioMeshAdaptor::Load(IArchive& ar)
33 | {
34 | 	TRACE("FEBioLoadController::Load");
35 | 	while (IArchive::IO_OK == ar.OpenChunk())
36 | 	{
37 | 		int nid = ar.GetChunkID();
38 | 		switch (nid)
39 | 		{
40 | 		case CID_FEBIO_META_DATA: LoadClassMetaData(this, ar); break;
41 | 		case CID_FEBIO_BASE_DATA: FSMeshAdaptor::Load(ar); break;
42 | 		default:
43 | 			assert(false);
44 | 		}
45 | 		ar.CloseChunk();
46 | 	}
47 | 	// We call this to make sure that the FEBio class has the same parameters
48 | 	UpdateData(true);
49 | }
50 | 


--------------------------------------------------------------------------------
/FEMLib/FEMeshAdaptor.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include "FEDomainComponent.h"
 3 | 
 4 | enum MeshAdaptorType {
 5 | 	FE_FEBIO_MESH_ADAPTOR = 1
 6 | };
 7 | 
 8 | class FSMeshAdaptor : public FSDomainComponent
 9 | {
10 | public:
11 | 	FSMeshAdaptor(FSModel* fem, int ntype);
12 | };
13 | 
14 | class FEBioMeshAdaptor : public FSMeshAdaptor
15 | {
16 | public:
17 | 	FEBioMeshAdaptor(FSModel* fem);
18 | 
19 | public:
20 | 	void Save(OArchive& ar) override;
21 | 	void Load(IArchive& ar) override;
22 | };
23 | 


--------------------------------------------------------------------------------
/FEMLib/FEStepComponent.cpp:
--------------------------------------------------------------------------------
 1 | #include "stdafx.h"
 2 | #include "FEStepComponent.h"
 3 | 
 4 | FSStepComponent::FSStepComponent(FSModel* fem) : FSModelComponent(fem)
 5 | { 
 6 | 	m_bActive = true; 
 7 | 	m_nstepID = -1;
 8 | }
 9 | 
10 | int FSStepComponent::GetStep() { return m_nstepID; }
11 | void FSStepComponent::SetStep(int n) { m_nstepID = n; }
12 | 
13 | bool FSStepComponent::IsActiveInStep(int nstep)
14 | {
15 | 	return ((nstep == -1) || (m_nstepID == 0) || (nstep == m_nstepID));
16 | }
17 | 
18 | bool FSStepComponent::IsActive() const { return m_bActive; }
19 | void FSStepComponent::Activate(bool bact) { m_bActive = bact; }
20 | 
21 | 


--------------------------------------------------------------------------------
/FEMLib/FEStepComponent.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include "FEModelComponent.h"
 3 | #include <FECore/fecore_enum.h>
 4 | 
 5 | //-----------------------------------------------------------------------------
 6 | // Base class for all objects that are assigned to a step
 7 | class FSStepComponent : public FSModelComponent
 8 | {
 9 | public:
10 | 	FSStepComponent(FSModel* fem = nullptr);
11 | 
12 | 	int GetStep();
13 | 	void SetStep(int n);
14 | 
15 | 	bool IsActiveInStep(int nstep = -1);
16 | 	bool IsActive() const;
17 | 	void Activate(bool bact = true);
18 | 
19 | protected:
20 | 	int		m_nstepID;		// step ID to which this component belongs
21 | 	bool	m_bActive;		// is this active
22 | };
23 | 


--------------------------------------------------------------------------------
/FEMLib/FEUserMaterial.h:
--------------------------------------------------------------------------------
 1 | #pragma once
 2 | #include "FECoreMaterial.h"
 3 | 
 4 | class FSUserMaterial : public FSMaterial
 5 | {
 6 | 	enum { SZTYPE, PARAMDATA, PARAMNAME, PARAMVALUE, PARAMTYPE };
 7 | 
 8 | public:
 9 | 	FSUserMaterial(int ntype, FSModel* fem);
10 | 	~FSUserMaterial();
11 | 
12 | 	void SetTypeString(const std::string& sz) override;
13 | 	const char* GetTypeString() const override { return m_sztype; }
14 | 
15 | 	void AddParameter(const char* szname, double v);
16 | 
17 | 	void Save(OArchive& ar);
18 | 	void Load(IArchive& ar);
19 | 
20 | 	void copy(FSMaterial* pm);
21 | 
22 | protected:
23 | 	char				m_sztype[256];	// type name
24 | 	std::vector<char*>	m_pname;		// list of parameter names
25 | };
26 | 


--------------------------------------------------------------------------------
/FEMLib/stdafx.h:
--------------------------------------------------------------------------------
1 | #pragma once
2 | 


--------------------------------------------------------------------------------
/FSCore/FSCore.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2020 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | #pragma once
27 | #include <string>
28 | 
29 | namespace FSCore {
30 | 
31 | 	std::string beautify_string(const char* sz);
32 | }
33 | 


--------------------------------------------------------------------------------
/FSCore/FSCore.pro:
--------------------------------------------------------------------------------
 1 | TEMPLATE = lib
 2 | TARGET = fscore
 3 | DESTDIR = ../build/lib
 4 | CONFIG += debug qt qwidgets opengl staticlib warn_off c++14
 5 | QMAKE_CXX = g++
 6 | QMAKE_CXXFLAGS += -std=c++14 -O0
 7 | DEFINES += LINUX HAS_QUAZIP HAS_SSH #HAS_OCC TETLIBRARY HAS_NETGEN FFMPEG
 8 | INCLUDEPATH += ../
 9 | 
10 | #QT += widgets opengl
11 | 
12 | 
13 | # Input
14 | HEADERS += *.h
15 | SOURCES = $$files(*.cpp)
16 | SOURCES -= $$files(moc_*.cpp)
17 | 


--------------------------------------------------------------------------------
/FSCore/math3d.h:
--------------------------------------------------------------------------------
1 | #pragma once
2 | #include <FECore/vec3d.h>
3 | #include <FECore/tens4d.h>
4 | #include <FECore/quatd.h>
5 | #include <FECore/mat3d.h>
6 | #include <FECore/matrix.h>
7 | 


--------------------------------------------------------------------------------
/FSCore/stdafx.cpp:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #include "stdafx.h"
28 | 


--------------------------------------------------------------------------------
/FSCore/stdafx.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 


--------------------------------------------------------------------------------
/GLLib/GLLib.pro:
--------------------------------------------------------------------------------
 1 | TEMPLATE = lib
 2 | TARGET = gllib
 3 | DESTDIR = ../build/lib
 4 | CONFIG += debug qt qwidgets opengl staticlib warn_off c++14
 5 | QMAKE_CXX = g++
 6 | QMAKE_CXXFLAGS += -std=c++14 -O0
 7 | DEFINES += LINUX HAS_OCC TETLIBRARY HAS_NETGEN HAS_QUAZIP HAS_SSH
 8 | INCLUDEPATH += ../
 9 | 
10 | #QT += widgets opengl
11 | 
12 | 
13 | # Input
14 | HEADERS += *.h
15 | SOURCES = $$files(*.cpp)
16 | SOURCES -= $$files(moc_*.cpp)
17 | 


--------------------------------------------------------------------------------
/GLLib/stdafx.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 


--------------------------------------------------------------------------------
/GLWLib/GLWLib.pro:
--------------------------------------------------------------------------------
 1 | TEMPLATE = lib
 2 | CONFIG += debug qt qwidgets opengl staticlib warn_off c++14
 3 | QMAKE_CXX = g++
 4 | QMAKE_CXXFLAGS += -std=c++14 -O0
 5 | DEFINES += LINUX HAS_OCC TETLIBRARY HAS_NETGEN HAS_QUAZIP HAS_SSH
 6 | DESTDIR = ../build/lib
 7 | TARGET = glwlib
 8 | INCLUDEPATH += ../
 9 | QT += widgets
10 | 
11 | HEADERS += *.h
12 | SOURCES = $$files(*.cpp)
13 | SOURCES -= $$files(moc_*.cpp)
14 | 


--------------------------------------------------------------------------------
/ImageLib/ImageAnalysis.cpp:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #include "ImageAnalysis.h"
28 | 
29 | CImageAnalysis::CImageAnalysis(int type, CImageModel* img)
30 |     : m_img(img), m_type(type)
31 | {
32 | 	m_active = true;
33 | }


--------------------------------------------------------------------------------
/ImageLib/stdafx.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 


--------------------------------------------------------------------------------
/LICENSE:
--------------------------------------------------------------------------------
 1 | MIT License
 2 | 
 3 | Copyright (c) 2020 University of Utah, The Trustees of Columbia University in  the City of New York, and others.
 4 | 
 5 | Permission is hereby granted, free of charge, to any person obtaining a copy
 6 | of this software and associated documentation files (the "Software"), to deal
 7 | in the Software without restriction, including without limitation the rights
 8 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 9 | copies of the Software, and to permit persons to whom the Software is
10 | furnished to do so, subject to the following conditions:
11 | 
12 | The above copyright notice and this permission notice shall be included in all
13 | copies or substantial portions of the Software.
14 | 
15 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
21 | SOFTWARE.
22 | 


--------------------------------------------------------------------------------
/MeshIO/stdafx.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 
29 | 


--------------------------------------------------------------------------------
/MeshTools/MeshTools.pro:
--------------------------------------------------------------------------------
 1 | TEMPLATE = lib
 2 | TARGET = meshtools
 3 | DESTDIR = ../build/lib
 4 | CONFIG += debug c++17 staticlib warn_off
 5 | QMAKE_CXX = g++
 6 | QMAKE_CXXFLAGS += -std=c++17 -O0
 7 | DEFINES += LINUX HAS_QUAZIP HAS_SSH HAS_OCC TETLIBRARY HAS_NETGEN FFMPEG HAS_MMG
 8 | INCLUDEPATH += ../
 9 | INCLUDEPATH += /opt/netgen/include
10 | INCLUDEPATH += /opt/netgen/include/include
11 | INCLUDEPATH += /home/mherron/Resources/opencascade-7.4.0/build/include/opencascade
12 | INCLUDEPATH += /home/mherron/Resources/tetgen1.5.1/
13 | INCLUDEPATH += /home/mherron/Resources/mmg/build/include
14 | 
15 | HEADERS += *.h
16 | SOURCES = $$files(*.cpp)
17 | SOURCES -= $$files(moc_*.cpp)
18 | 


--------------------------------------------------------------------------------
/MeshTools/ReadMe.txt:
--------------------------------------------------------------------------------
 1 | ========================================================================
 2 |     STATIC LIBRARY : MeshTools Project Overview
 3 | ========================================================================
 4 | 
 5 | AppWizard has created this MeshTools library project for you.
 6 | 
 7 | No source files were created as part of your project.
 8 | 
 9 | 
10 | MeshTools.vcproj
11 |     This is the main project file for VC++ projects generated using an Application Wizard.
12 |     It contains information about the version of Visual C++ that generated the file, and
13 |     information about the platforms, configurations, and project features selected with the
14 |     Application Wizard.
15 | 
16 | /////////////////////////////////////////////////////////////////////////////
17 | Other notes:
18 | 
19 | AppWizard uses "TODO:" comments to indicate parts of the source code you
20 | should add to or customize.
21 | 
22 | /////////////////////////////////////////////////////////////////////////////
23 | 


--------------------------------------------------------------------------------
/MeshTools/previewlib.pro:
--------------------------------------------------------------------------------
 1 | TEMPLATE = lib
 2 | TARGET = previewlib
 3 | DESTDIR = ../build/lib
 4 | CONFIG += debug c++14 staticlib warn_off
 5 | DEFINES += LINUX HAS_NETGEN HAS_OCC
 6 | INCLUDEPATH += ../
 7 | INCLUDEPATH += /opt/netgen/include
 8 | INCLUDEPATH += /opt/netgen/include/include
 9 | INCLUDEPATH += /home/sci/mherron/Resources/opencascade-7.3.0/include/opencascade
10 | 
11 | HEADERS += *.h
12 | SOURCES += *.cpp
13 | 


--------------------------------------------------------------------------------
/MeshTools/stdafx.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 


--------------------------------------------------------------------------------
/PostGL/PostGL.pro:
--------------------------------------------------------------------------------
 1 | TEMPLATE = lib
 2 | DESTDIR = ../build/lib
 3 | TARGET = postgl
 4 | CONFIG += debug qt qwidgets opengl staticlib warn_off c++14
 5 | INCLUDEPATH += ../
 6 | QMAKE_CXX = g++
 7 | QMAKE_CXXFLAGS += -std=c++14 -O0 
 8 | DEFINES += LINUX HAS_OCC TETLIBRARY HAS_NETGEN HAS_QUAZIP HAS_SSH
 9 | 
10 | 
11 | # Input
12 | HEADERS += *.h
13 | SOURCES = $$files(*.cpp)
14 | SOURCES -= $$files(moc_*.cpp)
15 | 


--------------------------------------------------------------------------------
/PostLib/PostLib.pro:
--------------------------------------------------------------------------------
 1 | TEMPLATE = lib
 2 | TARGET = postlib
 3 | DESTDIR = ../build/lib
 4 | CONFIG += debug c++14 staticlib warn_off 
 5 | QMAKE_CXX = g++
 6 | QMAKE_CXXFLAGS += -std=c++14 -O0
 7 | DEFINES += LINUX HAS_OCC TETLIBRARY HAS_NETGEN HAS_QUAZIP HAS_SSH FFMPEG
 8 | INCLUDEPATH += ../
 9 | INCLUDEPATH += /home/sci/mherron/Resources/tetgen1.5.0/
10 | INCLUDEPATH += /usr/include/ffmpeg
11 | 
12 | # Input
13 | HEADERS += *.h
14 | SOURCES = $$files(*.cpp)
15 | SOURCES -= $$files(moc_*.cpp)
16 | 


--------------------------------------------------------------------------------
/PostLib/PostView.cpp:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #include "stdafx.h"
28 | #include "PostView.h"
29 | #include <PostLib/ColorMap.h>
30 | 
31 | void Post::Initialize()
32 | {
33 | 	ColorMapManager::Initialize();
34 | }
35 | 


--------------------------------------------------------------------------------
/PostLib/PostView.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 
29 | namespace Post {
30 | 	void Initialize();
31 | }
32 | 


--------------------------------------------------------------------------------
/PostLib/stdafx.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 


--------------------------------------------------------------------------------
/README.md:
--------------------------------------------------------------------------------
 1 | <img src="Documentation/InstallerImages/Splash.png" href="https://gibboncode.org" alt="FEBio Studio" width="75%">
 2 | <!-- ![febio studio logo](Documentation/InstallerImages/Splash.png) -->
 3 | 
 4 | FEBio Studio is an integrated environment for FEBio, which allows users to generate, and solve FEBio models, as well as visualize and analyze the FEBio results. FEBio Studio also provides access to the online FEBio model repository, where users can find examples, tutorial models, and curated FEBio models that were used in peer-reviewed research studies.
 5 | 
 6 | Executables for FEBio Studio can be downloaded from https://febio.org/downloads/.  Please inform us of publications that use FEBio or FEBio Studio in research.  Information can be found on the Publications tab on febio.org.  
 7 | 
 8 | Support forums can be found at https://forums.febio.org/.
 9 | 
10 | [![DOI](https://img.shields.io/badge/Citation-DOI:10.1115/1.4005694-green.svg)](https://dx.doi.org/10.1115%2F1.4005694)
11 | 
12 | [![License](https://img.shields.io/badge/License-MIT-orange.svg)](LICENSE)
13 | 
14 | # Build Guide <a name="Build"></a>
15 | 
16 | Refer to [BUILD](BUILD.md)
17 | 
18 | # Contributing <a name="Contributing"></a>
19 | 
20 | Refer to [CONTRIBUTING](CONTRIBUTING.md)
21 | 
22 | # Code of conduct <a name="Conduct"></a>
23 | 
24 | Refer to [CODE_OF_CONDUCT](CODE_OF_CONDUCT.md)
25 | 
26 | 
27 | 
28 | 
29 | 
30 | 
31 | 
32 | 
33 | 
34 | 
35 | 
36 | 
37 | 
38 | 
39 | 
40 | 
41 | 
42 | 
43 | 
44 | 
45 | 
46 | 
47 | 
48 | 
49 | 
50 | 


--------------------------------------------------------------------------------
/Updater/FEBioStudioUpdater.pro:
--------------------------------------------------------------------------------
 1 | DESTDIR = .
 2 | TEMPLATE = app
 3 | TARGET = FEBioStudioUpdater
 4 | DESTDIR = ./build/bin
 5 | CONFIG += debug c++14
 6 | CONFIG += qt opengl qtwidgets qtcharts warn_off
 7 | DEFINES += LINUX
 8 | INCLUDEPATH += .
 9 | INCLUDEPATH += /home/mherron/Projects/FEBioStudio
10 | QT += widgets opengl gui charts network webenginewidgets
11 | QMAKE_CXX = g++
12 | QMAKE_CXXFLAGS += -std=c++14 -O0
13 | QMAKE_LFLAGS += -static-libstdc++ -static-libgcc
14 | #QMAKE_LFLAGS_RPATH = \$$ORIGIN/../lib/
15 | QMAKE_RPATHDIR += $ORIGIN/../lib
16 | #QMAKE_LFLAGS += '-Wl,-rpath,\'\$$ORIGIN/../lib/\',-z,origin'
17 | 
18 | LIBS += -L/home/mherron/Projects/FEBioStudio/build/Release/lib
19 | LIBS += -Wl,--start-group
20 | 
21 | LIBS += -lMathLib -lFSCore -lXML
22 | 
23 | LIBS += -Wl,--end-group
24 | 
25 | 
26 | 
27 | #RESOURCES = ../febiostudio.qrc
28 | 
29 | HEADERS += *.h
30 | SOURCES = $$files(*.cpp)
31 | SOURCES -= $$files(moc_*.cpp)
32 | SOURCES -= $$files(qrc_*)
33 | 
34 | 
35 | 


--------------------------------------------------------------------------------
/Updater/FEBioStudioUpdater.qrc:
--------------------------------------------------------------------------------
1 | <RCC>
2 |     <qresource prefix="/">
3 |         <file>images/FEBioStudio.png</file>
4 |         <file>images/leftSide.png</file>
5 | 	</qresource>
6 | </RCC>
7 | 


--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
/XPLTLib/Makefile:
--------------------------------------------------------------------------------
 1 | CCFLAGS = -g -I../ -O3 -std=c++11
 2 | CCFLAGS += -I../
 3 | DEF = -DLINUX
 4 | LIBDIR = $(notdir $(CURDIR))
 5 | POSTLIB = $(shell echo $(LIBDIR) | tr A-Z a-z)
 6 | 
 7 | SRC = $(wildcard *.cpp)
 8 | DEP = $(wildcard *.h)
 9 | OBJ = $(SRC:.cpp=.o)
10 | 
11 | LIB = ../build/lib/lib$(POSTLIB).a
12 | 
13 | $(LIB): $(OBJ)
14 | 	ar crs -o $(LIB) $(OBJ)
15 | 
16 | %.o: %.cpp $(DEP)
17 | 	$(CC) -c $(DEF) $(CCFLAGS) -o $@ $<
18 | 
19 | clean:
20 | 	$(RM) *.o *.d $(LIB)
21 | 


--------------------------------------------------------------------------------
/XPLTLib/stdafx.h:
--------------------------------------------------------------------------------
 1 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
 2 | listed below.
 3 | 
 4 | See Copyright-FEBio-Studio.txt for details.
 5 | 
 6 | Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
 7 | the City of New York, and others.
 8 | 
 9 | Permission is hereby granted, free of charge, to any person obtaining a copy
10 | of this software and associated documentation files (the "Software"), to deal
11 | in the Software without restriction, including without limitation the rights
12 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
13 | copies of the Software, and to permit persons to whom the Software is
14 | furnished to do so, subject to the following conditions:
15 | 
16 | The above copyright notice and this permission notice shall be included in all
17 | copies or substantial portions of the Software.
18 | 
19 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
20 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
21 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
22 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
23 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
24 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
25 | SOFTWARE.*/
26 | 
27 | #pragma once
28 | 


--------------------------------------------------------------------------------
/Xcode/Abaqus/Abaqus.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
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1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:Abaqus.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


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 1 | {
 2 |   "DVTSourceControlWorkspaceBlueprintPrimaryRemoteRepositoryKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487",
 3 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyRepositoryLocationsKey" : {
 4 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : {
 5 | 
 6 |     }
 7 |   },
 8 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyStatesKey" : {
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10 |   },
11 |   "DVTSourceControlWorkspaceBlueprintIdentifierKey" : "C535203C-2F04-42BA-8964-94890BA3F8EB",
12 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyPathsKey" : {
13 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : "MRLProjects\/"
14 |   },
15 |   "DVTSourceControlWorkspaceBlueprintNameKey" : "Abaqus",
16 |   "DVTSourceControlWorkspaceBlueprintVersion" : 204,
17 |   "DVTSourceControlWorkspaceBlueprintRelativePathToProjectKey" : "PreView2\/Xcode\/Abaqus\/Abaqus.xcodeproj",
18 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
19 |     {
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
22 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryIdentifierKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487"
23 |     }
24 |   ]
25 | }


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1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:Ansys.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


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 1 | {
 2 |   "DVTSourceControlWorkspaceBlueprintPrimaryRemoteRepositoryKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487",
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 5 | 
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 7 |   },
 8 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyStatesKey" : {
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11 |   "DVTSourceControlWorkspaceBlueprintIdentifierKey" : "CDC060DB-4512-4FEF-86D5-5298792DBCBC",
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14 |   },
15 |   "DVTSourceControlWorkspaceBlueprintNameKey" : "Ansys",
16 |   "DVTSourceControlWorkspaceBlueprintVersion" : 204,
17 |   "DVTSourceControlWorkspaceBlueprintRelativePathToProjectKey" : "PreView2\/Xcode\/Ansys\/Ansys.xcodeproj",
18 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
19 |     {
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
22 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryIdentifierKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487"
23 |     }
24 |   ]
25 | }


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1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:CUILib.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


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1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
3 | <plist version="1.0">
4 | <dict>
5 | 	<key>IDEDidComputeMac32BitWarning</key>
6 | 	<true/>
7 | </dict>
8 | </plist>
9 | 


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1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:Comsol.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


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 4 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : {
 5 | 
 6 |     }
 7 |   },
 8 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyStatesKey" : {
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10 |   },
11 |   "DVTSourceControlWorkspaceBlueprintIdentifierKey" : "DE70BB4B-F744-45D0-B8F1-A086F899314C",
12 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyPathsKey" : {
13 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : "MRLProjects\/"
14 |   },
15 |   "DVTSourceControlWorkspaceBlueprintNameKey" : "Comsol",
16 |   "DVTSourceControlWorkspaceBlueprintVersion" : 204,
17 |   "DVTSourceControlWorkspaceBlueprintRelativePathToProjectKey" : "PreView2\/Xcode\/Comsol\/Comsol.xcodeproj",
18 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
19 |     {
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
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23 |     }
24 |   ]
25 | }


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1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:FEBio.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


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18 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
19 |     {
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
22 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryIdentifierKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487"
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24 |   ]
25 | }


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1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
3 | <plist version="1.0">
4 | <dict>
5 | 	<key>IDEDidComputeMac32BitWarning</key>
6 | 	<true/>
7 | </dict>
8 | </plist>
9 | 


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2 | <Workspace
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 3 | <plist version="1.0">
 4 | <dict>
 5 |     <key>com.apple.security.app-sandbox</key>
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 7 |     <key>com.apple.security.files.user-selected.read-only</key>
 8 |     <true/>
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10 | </plist>
11 | 


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2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:FEMLib.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


--------------------------------------------------------------------------------
/Xcode/FEMLib/FEMLib.xcodeproj/project.xcworkspace/xcshareddata/FEMLib.xcscmblueprint:
--------------------------------------------------------------------------------
 1 | {
 2 |   "DVTSourceControlWorkspaceBlueprintPrimaryRemoteRepositoryKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487",
 3 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyRepositoryLocationsKey" : {
 4 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : {
 5 | 
 6 |     }
 7 |   },
 8 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyStatesKey" : {
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10 |   },
11 |   "DVTSourceControlWorkspaceBlueprintIdentifierKey" : "7541DA4F-2C4A-43D8-9917-B32533794A0F",
12 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyPathsKey" : {
13 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : "MRLProjects\/"
14 |   },
15 |   "DVTSourceControlWorkspaceBlueprintNameKey" : "FEMLib",
16 |   "DVTSourceControlWorkspaceBlueprintVersion" : 204,
17 |   "DVTSourceControlWorkspaceBlueprintRelativePathToProjectKey" : "PreView2\/Xcode\/FEMLib\/FEMLib.xcodeproj",
18 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
19 |     {
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
22 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryIdentifierKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487"
23 |     }
24 |   ]
25 | }


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/Xcode/GLWLib/GLWLib.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
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1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:GLWLib.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


--------------------------------------------------------------------------------
/Xcode/GLWLib/GLWLib.xcodeproj/project.xcworkspace/xcshareddata/GLWLib.xcscmblueprint:
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 1 | {
 2 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyRepositoryLocationsKey" : {
 3 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : {
 4 |       "DVTSourceControlWorkingCopyRepositoryBranchesLocationKey" : "branches"
 5 |     }
 6 |   },
 7 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyStatesKey" : {
 8 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : 9223372036854775807
 9 |   },
10 |   "DVTSourceControlWorkspaceBlueprintIdentifierKey" : "C8744C20-4451-4FD1-94C7-03E36CC06C95",
11 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyPathsKey" : {
12 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : "..\/.."
13 |   },
14 |   "DVTSourceControlWorkspaceBlueprintNameKey" : "GLWLib",
15 |   "DVTSourceControlWorkspaceBlueprintVersion" : 204,
16 |   "DVTSourceControlWorkspaceBlueprintRelativePathToProjectKey" : "GLWLib.xcodeproj",
17 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
18 |     {
19 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryIdentifierKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487"
22 |     }
23 |   ]
24 | }


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/Xcode/GLWLib/GLWLib.xcodeproj/project.xcworkspace/xcuserdata/brandon.xcuserdatad/UserInterfaceState.xcuserstate:
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https://raw.githubusercontent.com/febiosoftware/FEBioStudio/e6a38574dac431ab7667349c861f25cdb7357181/Xcode/GLWLib/GLWLib.xcodeproj/project.xcworkspace/xcuserdata/brandon.xcuserdatad/UserInterfaceState.xcuserstate


--------------------------------------------------------------------------------
/Xcode/GLWLib/GLWLib.xcodeproj/xcuserdata/brandon.xcuserdatad/xcschemes/xcschememanagement.plist:
--------------------------------------------------------------------------------
 1 | <?xml version="1.0" encoding="UTF-8"?>
 2 | <!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
 3 | <plist version="1.0">
 4 | <dict>
 5 | 	<key>SchemeUserState</key>
 6 | 	<dict>
 7 | 		<key>GLWLib.xcscheme</key>
 8 | 		<dict>
 9 | 			<key>orderHint</key>
10 | 			<integer>0</integer>
11 | 		</dict>
12 | 	</dict>
13 | 	<key>SuppressBuildableAutocreation</key>
14 | 	<dict>
15 | 		<key>CAA4B21C20ADE848002B19A6</key>
16 | 		<dict>
17 | 			<key>primary</key>
18 | 			<true/>
19 | 		</dict>
20 | 	</dict>
21 | </dict>
22 | </plist>
23 | 


--------------------------------------------------------------------------------
/Xcode/GeomLib/GeomLib.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:GeomLib.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


--------------------------------------------------------------------------------
/Xcode/GeomLib/GeomLib.xcodeproj/project.xcworkspace/xcshareddata/GeomLib.xcscmblueprint:
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 1 | {
 2 |   "DVTSourceControlWorkspaceBlueprintPrimaryRemoteRepositoryKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487",
 3 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyRepositoryLocationsKey" : {
 4 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : {
 5 | 
 6 |     }
 7 |   },
 8 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyStatesKey" : {
 9 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : 9223372036854775807
10 |   },
11 |   "DVTSourceControlWorkspaceBlueprintIdentifierKey" : "984BBF17-20DD-48C8-8784-7316FFF3D28B",
12 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyPathsKey" : {
13 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : "MRLProjects\/"
14 |   },
15 |   "DVTSourceControlWorkspaceBlueprintNameKey" : "GeomLib",
16 |   "DVTSourceControlWorkspaceBlueprintVersion" : 204,
17 |   "DVTSourceControlWorkspaceBlueprintRelativePathToProjectKey" : "PreView2\/Xcode\/GeomLib\/GeomLib.xcodeproj",
18 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
19 |     {
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
22 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryIdentifierKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487"
23 |     }
24 |   ]
25 | }


--------------------------------------------------------------------------------
/Xcode/ImageLib/ImageLib.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:ImageLib.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


--------------------------------------------------------------------------------
/Xcode/ImageLib/ImageLib.xcodeproj/project.xcworkspace/xcshareddata/IDEWorkspaceChecks.plist:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
3 | <plist version="1.0">
4 | <dict>
5 | 	<key>IDEDidComputeMac32BitWarning</key>
6 | 	<true/>
7 | </dict>
8 | </plist>
9 | 


--------------------------------------------------------------------------------
/Xcode/MathLib/MathLib.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:MathLib.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


--------------------------------------------------------------------------------
/Xcode/MathLib/MathLib.xcodeproj/project.xcworkspace/xcshareddata/MathLib.xcscmblueprint:
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 1 | {
 2 |   "DVTSourceControlWorkspaceBlueprintPrimaryRemoteRepositoryKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487",
 3 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyRepositoryLocationsKey" : {
 4 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : {
 5 | 
 6 |     }
 7 |   },
 8 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyStatesKey" : {
 9 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : 9223372036854775807
10 |   },
11 |   "DVTSourceControlWorkspaceBlueprintIdentifierKey" : "9EBD4994-24CB-42A8-B389-962C4BDA50D5",
12 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyPathsKey" : {
13 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : "MRLProjects\/"
14 |   },
15 |   "DVTSourceControlWorkspaceBlueprintNameKey" : "MathLib",
16 |   "DVTSourceControlWorkspaceBlueprintVersion" : 204,
17 |   "DVTSourceControlWorkspaceBlueprintRelativePathToProjectKey" : "PreView2\/Xcode\/MathLib\/MathLib.xcodeproj",
18 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
19 |     {
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
22 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryIdentifierKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487"
23 |     }
24 |   ]
25 | }


--------------------------------------------------------------------------------
/Xcode/MeshLib/MeshLib.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:MeshLib.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


--------------------------------------------------------------------------------
/Xcode/MeshLib/MeshLib.xcodeproj/project.xcworkspace/xcshareddata/MeshLib.xcscmblueprint:
--------------------------------------------------------------------------------
 1 | {
 2 |   "DVTSourceControlWorkspaceBlueprintPrimaryRemoteRepositoryKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487",
 3 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyRepositoryLocationsKey" : {
 4 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : {
 5 | 
 6 |     }
 7 |   },
 8 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyStatesKey" : {
 9 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : 9223372036854775807
10 |   },
11 |   "DVTSourceControlWorkspaceBlueprintIdentifierKey" : "BF3D947A-9DCF-4B6A-A17E-491E5E710DBB",
12 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyPathsKey" : {
13 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : "MRLProjects\/"
14 |   },
15 |   "DVTSourceControlWorkspaceBlueprintNameKey" : "MeshLib",
16 |   "DVTSourceControlWorkspaceBlueprintVersion" : 204,
17 |   "DVTSourceControlWorkspaceBlueprintRelativePathToProjectKey" : "PreView2\/Xcode\/MeshLib\/MeshLib.xcodeproj",
18 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
19 |     {
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
22 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryIdentifierKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487"
23 |     }
24 |   ]
25 | }


--------------------------------------------------------------------------------
/Xcode/PostGL/PostGL.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:PostGL.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


--------------------------------------------------------------------------------
/Xcode/PostLib/PostLib.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 | </Workspace>
5 | 


--------------------------------------------------------------------------------
/Xcode/XML/XML.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:XML.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


--------------------------------------------------------------------------------
/Xcode/XML/XML.xcodeproj/project.xcworkspace/xcshareddata/XML.xcscmblueprint:
--------------------------------------------------------------------------------
 1 | {
 2 |   "DVTSourceControlWorkspaceBlueprintPrimaryRemoteRepositoryKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487",
 3 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyRepositoryLocationsKey" : {
 4 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : {
 5 | 
 6 |     }
 7 |   },
 8 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyStatesKey" : {
 9 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : 9223372036854775807
10 |   },
11 |   "DVTSourceControlWorkspaceBlueprintIdentifierKey" : "17CFA085-38FB-47CA-A4F1-240DDC5FD515",
12 |   "DVTSourceControlWorkspaceBlueprintWorkingCopyPathsKey" : {
13 |     "b505bdfe-9d5c-0410-8600-697d5fc8e487" : "MRLProjects\/"
14 |   },
15 |   "DVTSourceControlWorkspaceBlueprintNameKey" : "XML",
16 |   "DVTSourceControlWorkspaceBlueprintVersion" : 204,
17 |   "DVTSourceControlWorkspaceBlueprintRelativePathToProjectKey" : "PreView2\/Xcode\/XML\/XML.xcodeproj",
18 |   "DVTSourceControlWorkspaceBlueprintRemoteRepositoriesKey" : [
19 |     {
20 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryURLKey" : "https:\/\/gforge.sci.utah.edu\/svn\/MRLProjects",
21 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositorySystemKey" : "com.apple.dt.Xcode.sourcecontrol.Subversion",
22 |       "DVTSourceControlWorkspaceBlueprintRemoteRepositoryIdentifierKey" : "b505bdfe-9d5c-0410-8600-697d5fc8e487"
23 |     }
24 |   ]
25 | }


--------------------------------------------------------------------------------
/Xcode/XPLTLib/XPLTLib.xcodeproj/project.xcworkspace/contents.xcworkspacedata:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="UTF-8"?>
2 | <Workspace
3 |    version = "1.0">
4 |    <FileRef
5 |       location = "self:XPLTLib.xcodeproj">
6 |    </FileRef>
7 | </Workspace>
8 | 


--------------------------------------------------------------------------------
/build/.gitignore:
--------------------------------------------------------------------------------
1 | # Ignore everything in this directory
2 | *
3 | # Except this file
4 | !.gitignore
5 | 


--------------------------------------------------------------------------------
/ci/Linux/build.sh:
--------------------------------------------------------------------------------
 1 | #!/bin/bash
 2 | set -e
 3 | 
 4 | . $(dirname $0)/cmake.sh
 5 | 
 6 | main() {
 7 | 	# TODO: Figure out why it's not generating correctly on first attempt
 8 | 	run_cmake
 9 | 	run_cmake
10 | 	pushd cmbuild
11 | 	make -j $(nproc)
12 | 	popd
13 | }
14 | 
15 | main
16 | 


--------------------------------------------------------------------------------
/ci/Linux/cmake.sh:
--------------------------------------------------------------------------------
 1 | QT_DIR="/opt/Qt/6.7.3/gcc_64"
 2 | run_cmake() {
 3 | 	cmake -L . -B cmbuild \
 4 | 		-DQt_Root=$QT_DIR \
 5 | 		-DFEBio_SDK=febio4-sdk \
 6 | 		-DUSE_FFMPEG=ON \
 7 | 		-DUSE_TETGEN=ON \
 8 | 		-DUSE_MMG=ON \
 9 | 		-DUSE_SSH=ON \
10 | 		-DUSE_SSL=ON \
11 | 		-DCAD_FEATURES=ON \
12 | 		-DUSE_NETGEN=ON \
13 | 		-DUSE_ITK=ON \
14 | 		-DBUILD_UPDATER=ON
15 | }
16 | 


--------------------------------------------------------------------------------
/ci/Linux/febio.xml:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="ISO-8859-1"?>
2 | <febio_config version="3.0">
3 | 	<default_linear_solver type="pardiso"></default_linear_solver>
4 | 	<import>libFEBioChem.so</import>
5 | 	<import>libFEBioHeat.so</import>
6 | </febio_config>
7 | 


--------------------------------------------------------------------------------
/ci/Linux/git-safe.sh:
--------------------------------------------------------------------------------
1 | #!/bin/bash
2 | set -e
3 | git config --global --add safe.directory /FEBioStudio
4 | 


--------------------------------------------------------------------------------
/ci/Linux/publish-to-s3.sh:
--------------------------------------------------------------------------------
1 | #! /bin/bash
2 | 
3 | ci/common/linux/publish-to-s3.sh artifacts/febio-studio
4 | 


--------------------------------------------------------------------------------
/ci/Linux/scp-to-repo-release.sh:
--------------------------------------------------------------------------------
1 | #! /bin/bash
2 | chmod +x artifacts/bin/*
3 | scp artifacts/bin/* repo:~/update2/FEBioStudio2/Linux/stage/bin
4 | scp artifacts/lib/* repo:~/update2/FEBioStudio2/Linux/stage/lib
5 | scp artifacts/doc/* repo:~/update2/FEBioStudio2/Linux/stage/doc
6 | scp artifacts/sdk.zip repo:~/update2/FEBioStudio2/Linux/stage
7 | 


--------------------------------------------------------------------------------
/ci/Linux/scp-to-repo.sh:
--------------------------------------------------------------------------------
 1 | #! /bin/bash
 2 | 
 3 | REMOTE_PATH="update2/FEBioStudio2Dev/Linux/stage"
 4 | if [ $# == 1 ] && [ "$1" != "develop" ]; then
 5 |     REMOTE_PATH="update2/FEBioStudio2Dev/branches/$1/Linux/stage"
 6 | fi
 7 | 
 8 | chmod +x cmbuild/bin/*
 9 | scp cmbuild/bin/* repo:~/$REMOTE_PATH/bin
10 | 


--------------------------------------------------------------------------------
/ci/Windows/build.bat:
--------------------------------------------------------------------------------
 1 | call "%VS2019INSTALLDIR%\VC\Auxiliary\Build\vcvars64.bat"
 2 | 
 3 | cmake -version
 4 | set Qt_Root="c:/usr/local/Qt/6.7.3/msvc2019_64"
 5 | :: TODO: Cmake requires 6 runs to generate correctly
 6 | for /l %%a in (1, 1, 6) do (
 7 | cmake -L . -B cmbuild ^
 8 |   -DQt_Root=%Qt_Root% ^
 9 |   -DFEBio_SDK=febio4-sdk ^
10 |   -DWINDEPLOYQT_EXECUTABLE="%Qt_Root%\bin\windeployqt.exe" ^
11 |   -DUSE_FFMPEG=ON ^
12 |   -DUSE_TETGEN=ON ^
13 |   -DUSE_MMG=ON ^
14 |   -DUSE_SSH=ON ^
15 |   -DUSE_SSL=ON ^
16 |   -DCAD_FEATURES=ON ^
17 |   -DUSE_NETGEN=ON ^
18 |   -DMODEL_REPO=ON ^
19 |   -DUSE_ITK=ON ^
20 |   -DBUILD_UPDATER=ON
21 | )
22 | cd cmbuild
23 | msbuild /v:m /P:Configuration=Release /clp:ErrorsOnly /m:%NUMBER_OF_PROCESSORS% ALL_BUILD.vcxproj
24 | cd ..
25 | exit 0
26 | 


--------------------------------------------------------------------------------
/ci/Windows/febio.xml:
--------------------------------------------------------------------------------
1 | <?xml version="1.0" encoding="ISO-8859-1"?>
2 | <febio_config version="3.0">
3 | 	<default_linear_solver type="pardiso"></default_linear_solver>
4 | 	<import>FEBioChem.dll</import>
5 | 	<import>FEBioHeat.dll</import>
6 | </febio_config>
7 | 


--------------------------------------------------------------------------------
/ci/Windows/publish-to-s3.sh:
--------------------------------------------------------------------------------
1 | #! /bin/bash
2 | ci/common/linux/publish-to-s3.sh artifacts/febio-studio
3 | 


--------------------------------------------------------------------------------
/ci/Windows/scp-to-repo-release.sh:
--------------------------------------------------------------------------------
1 | #! /bin/bash
2 | chmod +x artifacts/bin/*
3 | scp artifacts/bin/* repo:~/update2/FEBioStudio2/Windows/stage/bin
4 | scp artifacts/doc/* repo:~/update2/FEBioStudio2/Windows/stage/doc
5 | scp artifacts/sdk.zip repo:~/update2/FEBioStudio2/Windows/stage
6 | 


--------------------------------------------------------------------------------
/ci/Windows/scp-to-repo.sh:
--------------------------------------------------------------------------------
1 | #! /bin/bash
2 | 
3 | REMOTE_PATH="update2/FEBioStudio2Dev/Windows/stage"
4 | if [ $# == 1 ] && [ "$1" != "develop" ]; then
5 |     REMOTE_PATH="update2/FEBioStudio2Dev/branches/$1/Windows/stage"
6 | fi
7 | 
8 | scp cmbuild/bin/Release/* repo:~/$REMOTE_PATH/bin
9 | 


--------------------------------------------------------------------------------
/ci/common/linux/configure-ssh.sh:
--------------------------------------------------------------------------------
 1 | #! /bin/bash
 2 | mkdir -p ~/.ssh/
 3 | echo "$SSH_KEY" > ~/.ssh/repo.key
 4 | chmod 600 ~/.ssh/repo.key
 5 | cat >>~/.ssh/config <<END
 6 | Host repo
 7 | 	HostName $SSH_HOST
 8 | 	User $SSH_USER
 9 | 	IdentityFile ~/.ssh/repo.key
10 | 	StrictHostKeyChecking no
11 | END
12 | 


--------------------------------------------------------------------------------
/ci/common/linux/get-febio-sdk.sh:
--------------------------------------------------------------------------------
 1 | #! /bin/bash
 2 | OS="${OS}"
 3 | BUCKET="${BUCKET:-febio-packages}"
 4 | PACKAGE_PATH="${PACKAGE_PATH:-febio4}"
 5 | PACKAGE="${PACKAGE:-febio4-sdk}"
 6 | PACKAGE_BRANCH="${PACKAGE_BRANCH:-develop}"
 7 | VERSION="${VERSION:-v}"
 8 | 
 9 | PACKAGE_PREFIX="${PACKAGE_PATH}/${PACKAGE_BRANCH}/${OS}/"
10 | PACKAGE_SEARCH="${PACKAGE}-${VERSION}"
11 | 
12 | PACKAGE_URI=$(aws --output json s3api list-objects \
13 | 	--bucket "$BUCKET" \
14 | 	--prefix "$PACKAGE_PREFIX" \
15 | 	--query "reverse(sort_by(Contents,&LastModified)) && Contents[?contains(Key, '$PACKAGE_SEARCH')]" \
16 | 	| jq -r -e '. | max_by(.LastModified) | .Key')
17 | 
18 | STATUS=$?
19 | 
20 | if [[ ! -z "${PACKAGE_URI}" ]] && [[ $PACKAGE_URI != null ]]; then
21 | 	echo "SDK found at ${PACKAGE_URI}"
22 | 	ARCHIVE="${PACKAGE_URI##*/}"
23 | 	aws s3 cp "s3://$BUCKET/$PACKAGE_URI" .
24 | 	tar xvzf "$ARCHIVE"
25 | else
26 | 	echo "SDK not found at ${PACKAGE_PREFIX}${PACKAGE_SEARCH}*"; exit $STATUS
27 | fi
28 | 


--------------------------------------------------------------------------------
/ci/common/linux/publish-to-s3.sh:
--------------------------------------------------------------------------------
 1 | #! /bin/bash
 2 | SOURCE=$1
 3 | DIR=$(dirname "$SOURCE")
 4 | SOURCE=$(basename "$SOURCE")
 5 | TARGET_NAME=$SOURCE
 6 | pushd "$DIR" || exit 1
 7 | OS=${OS:-Linux}
 8 | PACKAGE="${TARGET_NAME}-${GIT_TAG}-${OS}.tar.gz"
 9 | BUCKET_NAME=${BUCKET_NAME:-febio-packages}
10 | REF_NAME=${REF_NAME:-$(git rev-parse --abbrev-ref HEAD)}
11 | PACKAGE_NAME=${PACKAGE_NAME:-febio}
12 | tar -czf "$PACKAGE" "$SOURCE"
13 | 
14 | FEBIO_VERSION="${FEBIO_VERSION:-v}"
15 | PREFIX="${PACKAGE_NAME}/${REF_NAME}/${OS}"
16 | 
17 | # Fetch previous version so we can mark it for expiration
18 | echo "Fetching previous for expiration"
19 | PREVIOUS_PACKAGE=$(aws --output json s3api list-objects \
20 | 	--bucket "$BUCKET_NAME" \
21 | 	--prefix "${PREFIX}/" \
22 | 	--query "reverse(sort_by(Contents,&LastModified)) && Contents[?contains(Key, '$TARGET_NAME-${FEBIO_VERSION}')]" \
23 | 	| jq -r -e '. | max_by(.LastModified) | .Key')
24 | 
25 | # Upload new package
26 | TARGET="s3://${BUCKET_NAME}/${PREFIX}/${PACKAGE}"
27 | aws s3 cp "$PACKAGE" "$TARGET"
28 | 
29 | # aws query fails if prefix doesn't exist and value is set to empty string ''
30 | # jq sets empty value to null, hence the test for null
31 | if [[ ! -z "${PREVIOUS_PACKAGE}" ]] && [[ $PREVIOUS_PACKAGE != null ]]; then
32 | 	echo "Tagging previous for expiration"
33 | 	aws s3api put-object-tagging \
34 | 	--bucket $BUCKET_NAME \
35 | 	--key $PREVIOUS_PACKAGE \
36 | 	--tagging '{"TagSet": [{ "Key": "ttl", "Value": "expire" }]}'
37 | fi
38 | 
39 | 
40 | popd || exit 1
41 | 


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/ci/common/windows/get-febio-sdk.bat:
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1 | @echo off
2 | 
3 | SET BUCKET=%BUCKET%
4 | SET PACKAGE_NAME=%PACKAGE_NAME%
5 | SET SDK_S3_URI="s3://%BUCKET%/%PACKAGE_NAME%/%FEBIO_SDK_BRANCH%/%OS%/%PACKAGE%"
6 | echo %SDK_S3_URI%
7 | aws "s3" "cp" "%SDK_S3_URI%" "."
8 | tar "xzf" "%PACKAGE%"
9 | 


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/ci/macOS/build.sh:
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 1 | #!/bin/bash
 2 | set -e
 3 | RUN_POST_BUILD=${RUN_POST_BUILD:=true}
 4 | 
 5 | . $(dirname $0)/cmake.sh
 6 | 
 7 | main() {
 8 | 	# TODO: Figure out why it's not generating correctly on first attempt
 9 | 	run_cmake
10 | 	pushd cmbuild
11 | 	make -j $(sysctl -n hw.ncpu)
12 | 	popd
13 | 
14 | 	if [ "$RUN_POST_BUILD" = true ]; then
15 | 		echo "Running postbuild.sh"
16 | 		 ./$(dirname $0)/postBuild.sh
17 | 	else
18 | 		echo "Skipping postbuild.sh"
19 | 	fi
20 | }
21 | 
22 | main
23 | 


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/ci/macOS/cmake.sh:
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 1 | QT_ROOT="$HOME/local/x86_64/QtNew/6.7.3/macos"
 2 | run_cmake() {
 3 | 	cmake -L . -B cmbuild \
 4 | 		-DQt_Root=$QT_ROOT \
 5 | 		-DFEBio_SDK=febio4-sdk \
 6 | 		-DUSE_FFMPEG=ON \
 7 | 		-DUSE_TETGEN=ON \
 8 | 		-DUSE_MMG=ON \
 9 | 		-DUSE_SSH=ON \
10 | 		-DCAD_FEATURES=ON \
11 | 		-DUSE_ITK=ON \
12 | 		-DCMAKE_OSX_DEPLOYMENT_TARGET=10.15 \
13 | 		-DCMAKE_OSX_ARCHITECTURES=x86_64 \
14 | 		-DBUILD_UPDATER=ON \
15 | 		-DHOMEBREW=ON
16 | }
17 | 
18 | 
19 | 


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/ci/macOS/febio.xml:
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1 | <?xml version="1.0" encoding="ISO-8859-1"?>
2 | <febio_config version="3.0">
3 | 	<default_linear_solver type="pardiso"></default_linear_solver>
4 | 	<import>libFEBioChem.dylib</import>
5 | 	<import>libFEBioHeat.dylib</import>
6 | </febio_config>
7 | 


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/ci/macOS/git-safe.sh:
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1 | #!/bin/bash
2 | set -e
3 | git config --global --add safe.directory /FEBioStudio
4 | 


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/ci/macOS/publish-to-s3.sh:
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1 | #! /bin/bash
2 | 
3 | ci/common/linux/publish-to-s3.sh artifacts/febio-studio
4 | 


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/ci/macOS/scp-to-repo-release.sh:
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1 | #! /bin/bash
2 | chmod +x artifacts/MacOS/*
3 | scp artifacts/MacOS/* repo:~/update2/FEBioStudio2/macOS/stage/FEBioStudio.app/Contents/MacOS
4 | scp artifacts/Frameworks/* repo:~/update2/FEBioStudio2/macOS/stage/FEBioStudio.app/Contents/Frameworks
5 | scp artifacts/doc/* repo:~/update2/FEBioStudio2/macOS/stage/doc
6 | scp artifacts/sdk.zip repo:~/update2/FEBioStudio2/macOS/stage
7 | 


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/ci/macOS/scp-to-repo.sh:
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 1 | #! /bin/bash
 2 | 
 3 | REMOTE_PATH="update2/FEBioStudio2Dev/macOS/stage"
 4 | if [ $# == 1 ] && [ "$1" != "develop" ]; then
 5 |     REMOTE_PATH="update2/FEBioStudio2Dev/branches/$1/macOS/stage"
 6 | fi
 7 | 
 8 | chmod +x cmbuild/bin/FEBioStudio.app/Contents/MacOS/*
 9 | scp -r cmbuild/bin/FEBioStudio.app/Contents/MacOS/* repo:~/$REMOTE_PATH/FEBioStudio.app/Contents/MacOS
10 | 


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/docker-compose.yml:
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 1 | version: "3"
 2 | services:
 3 |   studio: &default
 4 |     image: febiosoftware/febio:ubuntu-22.04
 5 |     working_dir: /FEBioStudio
 6 |     volumes:
 7 |       - ../FEBio:/FEBio
 8 |       - ./:/FEBioStudio
 9 | 
10 |   studio-dev:
11 |     <<: *default
12 |     container_name: febio-dev
13 |     command: bash
14 | 
15 |   studio-build:
16 |     <<: *default
17 |     container_name: febio-build
18 |     command: bash -c "ci/linux/git-safe.sh && ci/linux/build.sh"
19 | 


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