├── .gitattributes ├── .gitignore ├── LICENSE ├── README.md ├── audio_files ├── ISBI_GAN │ ├── README.md │ ├── wave_gt.wav │ ├── wave_merge.wav │ ├── wave_pred_gan.wav │ └── wave_pred_syn.wav └── audio │ ├── GT │ ├── HB_gt.wav │ ├── LD_gt.wav │ ├── LEFT_gt.wav │ └── RIGHT_gt.wav │ ├── MERGE │ ├── HB_merge.wav │ ├── LD_merge.wav │ ├── LEFT_merge.wav │ ├── RIGHT_merge.wav │ └── hybrid_density_merge_s2.mp4 │ ├── PRED │ ├── HB_pred.wav │ ├── LD_pred.wav │ ├── LEFT_pred.wav │ └── RIGHT_pred.wav │ └── README.md ├── configs ├── AllSubjectInfo.json ├── a2a_production.yaml ├── e2a_production.yaml └── train_param_production.json ├── contamination_analysis ├── Analysis results │ └── NY742 │ │ └── figures │ │ ├── artifacts.fig │ │ ├── correlations_overview.fig │ │ ├── criterion.fig │ │ ├── cross-correlations.fig │ │ └── most_correlated_channels.fig ├── Scripts │ ├── analysis_example_script.m │ ├── data_formatting_example_script.m │ └── results.m └── Toolbox │ ├── ContaminationAnalysis.m │ └── functions │ ├── GetFullPath │ ├── GetFullPath.c │ ├── GetFullPath.m │ ├── GetFullPath_ReadMe.txt │ ├── InstallMex.m │ ├── license.txt │ └── uTest_GetFullPath.m │ ├── addPadding.m │ ├── applyMovingAverage.m │ ├── applyNormalization.m │ ├── computeMultichannelSpectrogram.m │ ├── computeSpectrogram.m │ ├── createChunkedMatfile.m │ ├── createRecordingMatfile.m │ ├── displaySpectrogram.m │ ├── getMatfileData.m │ ├── getMatfileVar.m │ ├── isMatfileField.m │ ├── linkFigureAxes │ ├── license.txt │ └── linkFigureAxes.m │ ├── matplotlib │ ├── cividis.m │ ├── inferno.m │ ├── license.txt │ ├── magma.m │ ├── matplotlib.png │ ├── plasma.m │ ├── tab10.m │ ├── tab20.m │ ├── tab20b.m │ ├── tab20c.m │ ├── twilight.m │ └── viridis.m │ ├── normStd.m │ ├── pathify.m │ ├── removePadding.m │ ├── searchSortedVector.m │ ├── setFigure.m │ ├── setMatfileData.m │ ├── shuffleArray.m │ ├── sliceArray.m │ ├── symFilter.m │ └── timeWaitbar.m ├── dataset.py ├── example_data ├── .gitattributes └── README.md ├── fig └── fig1.png ├── losses.py ├── metrics ├── pystoi_plus.py └── torch_stoi.py ├── model.py ├── modules ├── Swin2D_blocks.py └── Swin3D_blocks.py ├── networks.py ├── notebooks ├── example_data │ └── example_audio.wav ├── formant_pitch_label_extraction.ipynb ├── network.ipynb └── prepare_data.ipynb ├── requirements.txt ├── tracker.py ├── train_a2a.py ├── train_e2a.py └── utils ├── checkpointer.py ├── custom_adam.py ├── defaults.py ├── launcher.py ├── lreq.py ├── lreq_causal.py ├── registry.py ├── save.py └── util.py /.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/.gitattributes -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/README.md -------------------------------------------------------------------------------- /audio_files/ISBI_GAN/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/ISBI_GAN/README.md -------------------------------------------------------------------------------- /audio_files/ISBI_GAN/wave_gt.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/ISBI_GAN/wave_gt.wav -------------------------------------------------------------------------------- /audio_files/ISBI_GAN/wave_merge.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/ISBI_GAN/wave_merge.wav -------------------------------------------------------------------------------- /audio_files/ISBI_GAN/wave_pred_gan.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/ISBI_GAN/wave_pred_gan.wav -------------------------------------------------------------------------------- /audio_files/ISBI_GAN/wave_pred_syn.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/ISBI_GAN/wave_pred_syn.wav -------------------------------------------------------------------------------- /audio_files/audio/GT/HB_gt.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/GT/HB_gt.wav -------------------------------------------------------------------------------- /audio_files/audio/GT/LD_gt.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/GT/LD_gt.wav -------------------------------------------------------------------------------- /audio_files/audio/GT/LEFT_gt.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/GT/LEFT_gt.wav -------------------------------------------------------------------------------- /audio_files/audio/GT/RIGHT_gt.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/GT/RIGHT_gt.wav -------------------------------------------------------------------------------- /audio_files/audio/MERGE/HB_merge.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/MERGE/HB_merge.wav -------------------------------------------------------------------------------- /audio_files/audio/MERGE/LD_merge.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/MERGE/LD_merge.wav -------------------------------------------------------------------------------- /audio_files/audio/MERGE/LEFT_merge.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/MERGE/LEFT_merge.wav -------------------------------------------------------------------------------- /audio_files/audio/MERGE/RIGHT_merge.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/MERGE/RIGHT_merge.wav -------------------------------------------------------------------------------- /audio_files/audio/MERGE/hybrid_density_merge_s2.mp4: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/MERGE/hybrid_density_merge_s2.mp4 -------------------------------------------------------------------------------- /audio_files/audio/PRED/HB_pred.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/PRED/HB_pred.wav -------------------------------------------------------------------------------- /audio_files/audio/PRED/LD_pred.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/PRED/LD_pred.wav -------------------------------------------------------------------------------- /audio_files/audio/PRED/LEFT_pred.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/PRED/LEFT_pred.wav -------------------------------------------------------------------------------- /audio_files/audio/PRED/RIGHT_pred.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/PRED/RIGHT_pred.wav -------------------------------------------------------------------------------- /audio_files/audio/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/audio_files/audio/README.md -------------------------------------------------------------------------------- /configs/AllSubjectInfo.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/configs/AllSubjectInfo.json -------------------------------------------------------------------------------- /configs/a2a_production.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/configs/a2a_production.yaml -------------------------------------------------------------------------------- /configs/e2a_production.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/configs/e2a_production.yaml -------------------------------------------------------------------------------- /configs/train_param_production.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/configs/train_param_production.json -------------------------------------------------------------------------------- /contamination_analysis/Analysis results/NY742/figures/artifacts.fig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Analysis results/NY742/figures/artifacts.fig -------------------------------------------------------------------------------- /contamination_analysis/Analysis results/NY742/figures/correlations_overview.fig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Analysis results/NY742/figures/correlations_overview.fig -------------------------------------------------------------------------------- /contamination_analysis/Analysis results/NY742/figures/criterion.fig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Analysis results/NY742/figures/criterion.fig -------------------------------------------------------------------------------- /contamination_analysis/Analysis results/NY742/figures/cross-correlations.fig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Analysis results/NY742/figures/cross-correlations.fig -------------------------------------------------------------------------------- /contamination_analysis/Analysis results/NY742/figures/most_correlated_channels.fig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Analysis results/NY742/figures/most_correlated_channels.fig -------------------------------------------------------------------------------- /contamination_analysis/Scripts/analysis_example_script.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Scripts/analysis_example_script.m -------------------------------------------------------------------------------- /contamination_analysis/Scripts/data_formatting_example_script.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Scripts/data_formatting_example_script.m -------------------------------------------------------------------------------- /contamination_analysis/Scripts/results.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Scripts/results.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/ContaminationAnalysis.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/ContaminationAnalysis.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/GetFullPath/GetFullPath.c: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/GetFullPath/GetFullPath.c -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/GetFullPath/GetFullPath.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/GetFullPath/GetFullPath.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/GetFullPath/GetFullPath_ReadMe.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/GetFullPath/GetFullPath_ReadMe.txt -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/GetFullPath/InstallMex.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/GetFullPath/InstallMex.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/GetFullPath/license.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/GetFullPath/license.txt -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/GetFullPath/uTest_GetFullPath.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/GetFullPath/uTest_GetFullPath.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/addPadding.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/addPadding.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/applyMovingAverage.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/applyMovingAverage.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/applyNormalization.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/applyNormalization.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/computeMultichannelSpectrogram.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/computeMultichannelSpectrogram.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/computeSpectrogram.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/computeSpectrogram.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/createChunkedMatfile.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/createChunkedMatfile.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/createRecordingMatfile.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/createRecordingMatfile.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/displaySpectrogram.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/displaySpectrogram.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/getMatfileData.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/getMatfileData.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/getMatfileVar.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/getMatfileVar.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/isMatfileField.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/isMatfileField.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/linkFigureAxes/license.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/linkFigureAxes/license.txt -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/linkFigureAxes/linkFigureAxes.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/linkFigureAxes/linkFigureAxes.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/cividis.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/cividis.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/inferno.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/inferno.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/license.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/license.txt -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/magma.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/magma.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/matplotlib.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/matplotlib.png -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/plasma.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/plasma.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/tab10.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/tab10.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/tab20.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/tab20.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/tab20b.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/tab20b.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/tab20c.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/tab20c.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/twilight.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/twilight.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/matplotlib/viridis.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/matplotlib/viridis.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/normStd.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/normStd.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/pathify.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/pathify.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/removePadding.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/removePadding.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/searchSortedVector.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/searchSortedVector.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/setFigure.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/setFigure.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/setMatfileData.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/setMatfileData.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/shuffleArray.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/shuffleArray.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/sliceArray.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/sliceArray.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/symFilter.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/symFilter.m -------------------------------------------------------------------------------- /contamination_analysis/Toolbox/functions/timeWaitbar.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/contamination_analysis/Toolbox/functions/timeWaitbar.m -------------------------------------------------------------------------------- /dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/dataset.py -------------------------------------------------------------------------------- /example_data/.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/example_data/.gitattributes -------------------------------------------------------------------------------- /example_data/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/example_data/README.md -------------------------------------------------------------------------------- /fig/fig1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/fig/fig1.png -------------------------------------------------------------------------------- /losses.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/losses.py -------------------------------------------------------------------------------- /metrics/pystoi_plus.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/metrics/pystoi_plus.py -------------------------------------------------------------------------------- /metrics/torch_stoi.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/metrics/torch_stoi.py -------------------------------------------------------------------------------- /model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/model.py -------------------------------------------------------------------------------- /modules/Swin2D_blocks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/modules/Swin2D_blocks.py -------------------------------------------------------------------------------- /modules/Swin3D_blocks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/modules/Swin3D_blocks.py -------------------------------------------------------------------------------- /networks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/networks.py -------------------------------------------------------------------------------- /notebooks/example_data/example_audio.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/notebooks/example_data/example_audio.wav -------------------------------------------------------------------------------- /notebooks/formant_pitch_label_extraction.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/notebooks/formant_pitch_label_extraction.ipynb -------------------------------------------------------------------------------- /notebooks/network.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/notebooks/network.ipynb -------------------------------------------------------------------------------- /notebooks/prepare_data.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/notebooks/prepare_data.ipynb -------------------------------------------------------------------------------- /requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/requirements.txt -------------------------------------------------------------------------------- /tracker.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/tracker.py -------------------------------------------------------------------------------- /train_a2a.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/train_a2a.py -------------------------------------------------------------------------------- /train_e2a.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/train_e2a.py -------------------------------------------------------------------------------- /utils/checkpointer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/utils/checkpointer.py -------------------------------------------------------------------------------- /utils/custom_adam.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/utils/custom_adam.py -------------------------------------------------------------------------------- /utils/defaults.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/utils/defaults.py -------------------------------------------------------------------------------- /utils/launcher.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/utils/launcher.py -------------------------------------------------------------------------------- /utils/lreq.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/utils/lreq.py -------------------------------------------------------------------------------- /utils/lreq_causal.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/utils/lreq_causal.py -------------------------------------------------------------------------------- /utils/registry.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/utils/registry.py -------------------------------------------------------------------------------- /utils/save.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/utils/save.py -------------------------------------------------------------------------------- /utils/util.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/flinkerlab/neural_speech_decoding/HEAD/utils/util.py --------------------------------------------------------------------------------