├── README.md ├── data ├── cadec │ ├── dev.json │ ├── test.json │ └── train.json └── sample │ └── sample.json ├── debug_sample.py ├── models └── .gitkeep ├── preprocess_cadec.py ├── requirements.txt ├── sodner ├── __init__.py ├── data │ ├── .DS_Store │ ├── __init__.py │ ├── dataset_readers │ │ ├── __init__.py │ │ └── ie_json.py │ └── iterators │ │ ├── batch_iterator.py │ │ └── document_iterator.py ├── models │ ├── .DS_Store │ ├── __init__.py │ ├── entity_beam_pruner.py │ ├── gat.py │ ├── ner.py │ ├── relation.py │ ├── sodner.py │ └── span_extractors.py ├── predictors │ ├── .DS_Store │ ├── __init__.py │ └── my_predictor.py └── training │ ├── .DS_Store │ ├── f1.py │ ├── ner_metrics.py │ └── relation_metrics1.py ├── train_ace05.sh ├── train_cadec.sh ├── train_clef.sh ├── train_clef_dis.sh ├── train_genia.sh ├── train_sample.sh └── training_config ├── ace05_working_example.jsonnet ├── cadec_working_example.jsonnet ├── clef_dis_working_example.jsonnet ├── clef_working_example.jsonnet ├── 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