├── .Rbuildignore ├── .gitignore ├── DESCRIPTION ├── NAMESPACE ├── R ├── Makefile ├── createData.R └── uploadToOverleaf.R ├── README.md ├── singlecellworkflow.Rproj └── workflow ├── F1000header.png ├── f1000_styles.sty ├── ref.bib ├── schema_workflow.png ├── stemcelldiff_Fletcher2017_2e.png ├── workflow.Rmd ├── workflow.pdf └── zinb_schema.png /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/.gitignore -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/NAMESPACE -------------------------------------------------------------------------------- /R/Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/R/Makefile -------------------------------------------------------------------------------- /R/createData.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/R/createData.R -------------------------------------------------------------------------------- /R/uploadToOverleaf.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/R/uploadToOverleaf.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/README.md -------------------------------------------------------------------------------- /singlecellworkflow.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/singlecellworkflow.Rproj -------------------------------------------------------------------------------- /workflow/F1000header.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/workflow/F1000header.png -------------------------------------------------------------------------------- /workflow/f1000_styles.sty: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/workflow/f1000_styles.sty -------------------------------------------------------------------------------- /workflow/ref.bib: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/workflow/ref.bib -------------------------------------------------------------------------------- /workflow/schema_workflow.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/workflow/schema_workflow.png -------------------------------------------------------------------------------- /workflow/stemcelldiff_Fletcher2017_2e.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/workflow/stemcelldiff_Fletcher2017_2e.png -------------------------------------------------------------------------------- /workflow/workflow.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/workflow/workflow.Rmd -------------------------------------------------------------------------------- /workflow/workflow.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/workflow/workflow.pdf -------------------------------------------------------------------------------- /workflow/zinb_schema.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/fperraudeau/singlecellworkflow/HEAD/workflow/zinb_schema.png --------------------------------------------------------------------------------