├── .gitignore ├── AML_Report_Stranieri_Marchetti.pdf ├── AML_Slides_Stranieri_Marchetti.pdf ├── LICENSE ├── README.md ├── cnn-tl.py ├── cnn.py ├── dataset └── bacteria │ └── .gitignore ├── definitions.py ├── mlp.py ├── output ├── cnn-30class-gridsearch │ ├── accuracy_plot.pdf │ ├── antibiotic │ │ ├── classification_report.txt │ │ └── confusion_matrix.pdf │ ├── classification_report.txt │ ├── confusion_matrix.pdf │ ├── confusion_matrix_original.pdf │ ├── loss_plot.pdf │ └── model │ │ ├── model.h5 │ │ ├── model.pdf │ │ └── model_weights.h5 ├── cnn │ ├── accuracy_plot.pdf │ ├── antibiotic │ │ ├── classification_report.txt │ │ └── confusion_matrix.pdf │ ├── classification_report.txt │ ├── confusion_matrix.pdf │ ├── confusion_matrix_original.pdf │ ├── loss_plot.pdf │ └── model │ │ ├── model.h5 │ │ ├── model.pdf │ │ └── model_weights.h5 ├── mlp │ ├── accuracy_plot.pdf │ ├── antibiotic │ │ ├── classification_report.txt │ │ └── confusion_matrix.pdf │ ├── classification_report.txt │ ├── confusion_matrix.pdf │ ├── loss_plot.pdf │ ├── model.pdf │ └── model │ │ ├── model.h5 │ │ ├── model.pdf │ │ └── model_weights.h5 └── svm │ ├── antibiotic │ ├── classification_report.txt │ └── confusion_matrix.pdf │ ├── classification_report.txt │ ├── confusion_matrix.pdf │ └── confusion_matrix_original.pdf ├── processing.py ├── requirements.txt ├── svm.py └── utils.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/frenkowski/Deep_Learning_for_Bacteria_Identification_using_Raman_Spectroscopy/HEAD/.gitignore -------------------------------------------------------------------------------- /AML_Report_Stranieri_Marchetti.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/frenkowski/Deep_Learning_for_Bacteria_Identification_using_Raman_Spectroscopy/HEAD/AML_Report_Stranieri_Marchetti.pdf 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