├── LICENSE ├── README.md ├── README.pdf ├── dashboard.html ├── data ├── 10641_LoS_age_provider_suppressed.xlsx ├── ImperialReport8_subset_international_cases_2020_03_11.csv ├── clean_10641_LoS_age_provider_suppressed.csv ├── clean_hosp-epis-stat-admi-summ-rep-2015-16-rep_table_6.csv ├── clean_nhsclinicalstaff.csv ├── clean_testingCOVID19_by_day.csv ├── hosp-epis-stat-admi-summ-rep-2015-16-rep_table_6.png ├── nhsclinicalstaff.csv ├── socialcontactdata_UK_Mossong2008_social_contact_analysis.RData ├── socialcontactdata_UK_Mossong2008_social_contact_matrix.csv └── socialcontactdata_UK_Mossong2008_social_contact_matrix_with_distancing.csv ├── data_cleaning_R.ipynb ├── data_cleaning_py.ipynb ├── environment.yml ├── images ├── COexist_logo.png ├── dynamicalModel.png ├── figure1a.html ├── figure1a.png ├── figure1b.html ├── figure1b.png ├── figure1c.html ├── figure1c.png ├── figure1d.html ├── figure1d.png ├── figure1e.html └── figure1e.png ├── index.html ├── model_COVID_testing.ipynb ├── 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