├── .Rbuildignore ├── .gitignore ├── DESCRIPTION ├── MD5 ├── NAMESPACE ├── NEWS.md ├── R ├── .DS_Store ├── arrayspecs.r ├── bilat.symmetry.r ├── build.template.r ├── combine.subsets.R ├── compare.CR.R ├── compare.ZVrel.R ├── compare.evol.rates.r ├── compare.multi.evol.rates.r ├── compare.physign.z.r ├── compare.pls.r ├── coords.subset.r ├── define.links.r ├── define.modules.r ├── define.sliders.r ├── deprecated.defunct.r ├── digit.curves.r ├── digit.fixed.r ├── digitize2d.r ├── digitsurface.r ├── editTemplate.r ├── estimate.missing.r ├── extended.pgls.r ├── findMeanSpec.r ├── fixed.angle.r ├── geomorph.data.frame.r ├── geomorph.support.code.r ├── geomorph.utils.r ├── globalIntegration.r ├── gm.measurement.error.R ├── gm.prcomp.R ├── gpagen.r ├── gridPar.r ├── integration.Vrel.r ├── integration.test.r ├── interlmkdist.r ├── make_ggplot.r ├── modularity.test.r ├── morphol.disparity.r ├── phylo.integration.r ├── phylo.modularity.r ├── physignal.eigen.R ├── physignal.r ├── physignal.z.r ├── picknplot.shape.r ├── plotAllSpecimens.r ├── plotAllometry.r ├── plotOutliers.r ├── plotRefToTarget.r ├── plotspec.r ├── procD.lm.r ├── procD.pgls.r ├── read.morphologika.r ├── read.ply.r ├── readland.fcsv.r ├── readland.nts.r ├── readland.shapes.r ├── readland.tps.r ├── readmulti.nts.r ├── readmulti.tps.R ├── rotate.coords.R ├── shape.predictor.r ├── shapeHulls.r ├── shared.support.code.R ├── two.b.pls.r ├── two.d.array.r ├── warpRefMesh.r ├── warpRefOutline.r └── writeland.tps.r ├── README.md ├── cran-comments.md ├── data ├── hummingbirds.rda ├── larvalMorph.rda ├── lizards.rda ├── mosquito.rda ├── plethShapeFood.rda ├── plethodon.rda ├── plethspecies.rda ├── pupfish.rda ├── pupfish.ws.rda ├── ratland.rda ├── scallopPLY.rda └── scallops.rda ├── geomorph.Rproj ├── inst └── CITATION ├── man ├── arrayspecs.Rd ├── bilat.symmetry.Rd ├── buildtemplate.Rd ├── combine.subsets.Rd ├── compare.CR.Rd ├── compare.ZVrel.Rd ├── compare.evol.rates.Rd ├── compare.multi.evol.rates.Rd ├── compare.physignal.z.Rd ├── compare.pls.Rd ├── coords.subset.Rd ├── define.links.Rd ├── define.modules.Rd ├── define.sliders.Rd ├── digit.curves.Rd ├── digit.fixed.Rd ├── digitize2d.Rd ├── digitsurface.Rd ├── editTemplate.Rd ├── estimate.missing.Rd ├── extended.pgls.Rd ├── findMeanSpec.Rd ├── fixed.angle.Rd ├── geomorph-package.Rd ├── geomorph.data.frame.Rd ├── globalIntegration.Rd ├── gm.measurement.error.Rd ├── gm.prcomp.Rd ├── gpagen.Rd ├── gridPar.Rd ├── hummingbirds.Rd ├── integration.Vrel.Rd ├── integration.test.Rd ├── interlmkdist.Rd ├── larvalMorph.Rd ├── lizards.Rd ├── make_ggplot.Rd ├── modularity.test.Rd ├── morphol.disparity.Rd ├── mosquito.Rd ├── mshape.Rd ├── na.omit.geomorph.data.frame.Rd ├── phylo.integration.Rd ├── phylo.modularity.Rd ├── physignal.Rd ├── physignal.eigen.Rd ├── physignal.z.Rd ├── picknplot.shape.Rd ├── plethShapeFood.Rd ├── plethodon.Rd ├── plethspecies.Rd ├── plot.CR.Rd ├── plot.CR.phylo.Rd ├── plot.bilat.symmetry.Rd ├── plot.evolrate.Rd ├── plot.gm.prcomp.Rd ├── plot.gpagen.Rd ├── plot.mshape.Rd ├── plot.physignal.Rd ├── plot.physignal.eigen.Rd ├── plot.physignal.z.Rd ├── plot.pls.Rd ├── plot.procD.lm.Rd ├── plotAllSpecimens.Rd ├── plotAllometry.Rd ├── plotOutliers.Rd ├── plotRefToTarget.Rd ├── plotspec.Rd ├── print.CR.Rd ├── print.CR.phylo.Rd ├── print.bilat.symmetry.Rd ├── print.combined.set.Rd ├── print.compare.CR.Rd ├── print.compare.ZVrel.Rd ├── print.compare.physignal.z.Rd ├── print.compare.pls.Rd ├── print.evolrate.Rd ├── print.evolrate1.Rd ├── print.geomorphShapes.Rd ├── print.gm.prcomp.Rd ├── print.gpagen.Rd ├── print.morphol.disparity.Rd ├── print.physignal.Rd ├── print.physignal.eigen.Rd ├── print.physignal.z.Rd ├── print.pls.Rd ├── print.procD.lm.Rd ├── procD.lm.Rd ├── procD.pgls.Rd ├── pupfish.Rd ├── pupfish.ws.Rd ├── ratland.Rd ├── read.morphologika.Rd ├── read.ply.Rd ├── readland.fcsv.Rd ├── readland.nts.Rd ├── readland.shapes.Rd ├── readland.tps.Rd ├── readmulti.nts.Rd ├── readmulti.tps.Rd ├── rotate.coords.Rd ├── scallopPLY.Rd ├── scallops.Rd ├── shape.predictor.Rd ├── shapeHulls.Rd ├── summary.CR.Rd ├── summary.CR.phylo.Rd ├── summary.bilat.symmetry.Rd ├── summary.combined.set.Rd ├── summary.compare.CR.Rd ├── summary.compare.ZVrel.Rd ├── summary.compare.physignal.z.Rd ├── summary.compare.pls.Rd ├── summary.evolrate.Rd ├── summary.evolrate1.Rd ├── summary.geomorphShapes.Rd ├── summary.gm.prcomp.Rd ├── summary.gpagen.Rd ├── summary.morphol.disparity.Rd ├── summary.physignal.Rd ├── summary.physignal.eigen.Rd ├── summary.physignal.z.Rd ├── summary.pls.Rd ├── summary.procD.lm.Rd ├── two.b.pls.Rd ├── two.d.array.Rd ├── warpRefMesh.Rd ├── warpRefOutline.Rd └── writeland.tps.Rd ├── tests ├── testthat.R └── testthat │ └── test-geomorph.R └── vignettes ├── figs ├── PCAplot2D.png ├── example_spec2.png ├── example_template.png ├── fixed.3D.png └── tree.plot.png └── geomorph.digitize3D.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/.gitignore -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /MD5: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/MD5 -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/NAMESPACE -------------------------------------------------------------------------------- /NEWS.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/NEWS.md -------------------------------------------------------------------------------- /R/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/.DS_Store -------------------------------------------------------------------------------- /R/arrayspecs.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/arrayspecs.r -------------------------------------------------------------------------------- /R/bilat.symmetry.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/bilat.symmetry.r -------------------------------------------------------------------------------- /R/build.template.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/build.template.r -------------------------------------------------------------------------------- /R/combine.subsets.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/combine.subsets.R -------------------------------------------------------------------------------- /R/compare.CR.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/compare.CR.R -------------------------------------------------------------------------------- /R/compare.ZVrel.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/compare.ZVrel.R -------------------------------------------------------------------------------- /R/compare.evol.rates.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/compare.evol.rates.r -------------------------------------------------------------------------------- /R/compare.multi.evol.rates.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/compare.multi.evol.rates.r -------------------------------------------------------------------------------- /R/compare.physign.z.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/compare.physign.z.r -------------------------------------------------------------------------------- /R/compare.pls.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/compare.pls.r -------------------------------------------------------------------------------- /R/coords.subset.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/coords.subset.r -------------------------------------------------------------------------------- /R/define.links.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/define.links.r -------------------------------------------------------------------------------- /R/define.modules.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/define.modules.r -------------------------------------------------------------------------------- /R/define.sliders.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/define.sliders.r -------------------------------------------------------------------------------- /R/deprecated.defunct.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/deprecated.defunct.r -------------------------------------------------------------------------------- /R/digit.curves.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/digit.curves.r -------------------------------------------------------------------------------- /R/digit.fixed.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/digit.fixed.r -------------------------------------------------------------------------------- /R/digitize2d.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/digitize2d.r -------------------------------------------------------------------------------- /R/digitsurface.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/digitsurface.r -------------------------------------------------------------------------------- /R/editTemplate.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/editTemplate.r -------------------------------------------------------------------------------- /R/estimate.missing.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/estimate.missing.r -------------------------------------------------------------------------------- /R/extended.pgls.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/extended.pgls.r -------------------------------------------------------------------------------- /R/findMeanSpec.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/findMeanSpec.r -------------------------------------------------------------------------------- /R/fixed.angle.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/fixed.angle.r -------------------------------------------------------------------------------- /R/geomorph.data.frame.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/geomorph.data.frame.r -------------------------------------------------------------------------------- /R/geomorph.support.code.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/geomorph.support.code.r -------------------------------------------------------------------------------- /R/geomorph.utils.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/geomorph.utils.r -------------------------------------------------------------------------------- /R/globalIntegration.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/globalIntegration.r -------------------------------------------------------------------------------- /R/gm.measurement.error.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/gm.measurement.error.R -------------------------------------------------------------------------------- /R/gm.prcomp.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/gm.prcomp.R -------------------------------------------------------------------------------- /R/gpagen.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/gpagen.r -------------------------------------------------------------------------------- /R/gridPar.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/gridPar.r -------------------------------------------------------------------------------- /R/integration.Vrel.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/integration.Vrel.r -------------------------------------------------------------------------------- /R/integration.test.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/integration.test.r -------------------------------------------------------------------------------- /R/interlmkdist.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/interlmkdist.r -------------------------------------------------------------------------------- /R/make_ggplot.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/make_ggplot.r -------------------------------------------------------------------------------- /R/modularity.test.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/modularity.test.r -------------------------------------------------------------------------------- /R/morphol.disparity.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/morphol.disparity.r -------------------------------------------------------------------------------- /R/phylo.integration.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/phylo.integration.r -------------------------------------------------------------------------------- /R/phylo.modularity.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/phylo.modularity.r -------------------------------------------------------------------------------- /R/physignal.eigen.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/physignal.eigen.R -------------------------------------------------------------------------------- /R/physignal.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/physignal.r -------------------------------------------------------------------------------- /R/physignal.z.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/physignal.z.r -------------------------------------------------------------------------------- /R/picknplot.shape.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/picknplot.shape.r -------------------------------------------------------------------------------- /R/plotAllSpecimens.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/plotAllSpecimens.r -------------------------------------------------------------------------------- /R/plotAllometry.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/plotAllometry.r -------------------------------------------------------------------------------- /R/plotOutliers.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/plotOutliers.r -------------------------------------------------------------------------------- /R/plotRefToTarget.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/plotRefToTarget.r -------------------------------------------------------------------------------- /R/plotspec.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/plotspec.r -------------------------------------------------------------------------------- /R/procD.lm.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/procD.lm.r -------------------------------------------------------------------------------- /R/procD.pgls.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/procD.pgls.r -------------------------------------------------------------------------------- /R/read.morphologika.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/read.morphologika.r -------------------------------------------------------------------------------- /R/read.ply.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/read.ply.r -------------------------------------------------------------------------------- /R/readland.fcsv.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/readland.fcsv.r -------------------------------------------------------------------------------- /R/readland.nts.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/readland.nts.r -------------------------------------------------------------------------------- /R/readland.shapes.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/readland.shapes.r -------------------------------------------------------------------------------- /R/readland.tps.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/readland.tps.r -------------------------------------------------------------------------------- /R/readmulti.nts.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/readmulti.nts.r -------------------------------------------------------------------------------- /R/readmulti.tps.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/readmulti.tps.R -------------------------------------------------------------------------------- /R/rotate.coords.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/rotate.coords.R -------------------------------------------------------------------------------- /R/shape.predictor.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/shape.predictor.r -------------------------------------------------------------------------------- /R/shapeHulls.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/shapeHulls.r -------------------------------------------------------------------------------- /R/shared.support.code.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/shared.support.code.R -------------------------------------------------------------------------------- /R/two.b.pls.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/two.b.pls.r -------------------------------------------------------------------------------- /R/two.d.array.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/two.d.array.r -------------------------------------------------------------------------------- /R/warpRefMesh.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/warpRefMesh.r -------------------------------------------------------------------------------- /R/warpRefOutline.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/warpRefOutline.r -------------------------------------------------------------------------------- /R/writeland.tps.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/R/writeland.tps.r -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/README.md -------------------------------------------------------------------------------- /cran-comments.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/cran-comments.md -------------------------------------------------------------------------------- /data/hummingbirds.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/hummingbirds.rda -------------------------------------------------------------------------------- /data/larvalMorph.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/larvalMorph.rda -------------------------------------------------------------------------------- /data/lizards.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/lizards.rda -------------------------------------------------------------------------------- /data/mosquito.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/mosquito.rda -------------------------------------------------------------------------------- /data/plethShapeFood.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/plethShapeFood.rda -------------------------------------------------------------------------------- /data/plethodon.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/plethodon.rda -------------------------------------------------------------------------------- /data/plethspecies.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/plethspecies.rda -------------------------------------------------------------------------------- /data/pupfish.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/pupfish.rda -------------------------------------------------------------------------------- /data/pupfish.ws.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/pupfish.ws.rda -------------------------------------------------------------------------------- /data/ratland.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/ratland.rda -------------------------------------------------------------------------------- /data/scallopPLY.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/scallopPLY.rda -------------------------------------------------------------------------------- /data/scallops.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/data/scallops.rda -------------------------------------------------------------------------------- /geomorph.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/geomorph.Rproj -------------------------------------------------------------------------------- /inst/CITATION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/inst/CITATION -------------------------------------------------------------------------------- /man/arrayspecs.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/arrayspecs.Rd -------------------------------------------------------------------------------- /man/bilat.symmetry.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/bilat.symmetry.Rd -------------------------------------------------------------------------------- /man/buildtemplate.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/buildtemplate.Rd -------------------------------------------------------------------------------- /man/combine.subsets.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/combine.subsets.Rd -------------------------------------------------------------------------------- /man/compare.CR.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/compare.CR.Rd -------------------------------------------------------------------------------- /man/compare.ZVrel.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/compare.ZVrel.Rd -------------------------------------------------------------------------------- /man/compare.evol.rates.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/compare.evol.rates.Rd -------------------------------------------------------------------------------- /man/compare.multi.evol.rates.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/compare.multi.evol.rates.Rd -------------------------------------------------------------------------------- /man/compare.physignal.z.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/compare.physignal.z.Rd -------------------------------------------------------------------------------- /man/compare.pls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/compare.pls.Rd -------------------------------------------------------------------------------- /man/coords.subset.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/coords.subset.Rd -------------------------------------------------------------------------------- /man/define.links.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/define.links.Rd -------------------------------------------------------------------------------- /man/define.modules.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/define.modules.Rd -------------------------------------------------------------------------------- /man/define.sliders.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/define.sliders.Rd -------------------------------------------------------------------------------- /man/digit.curves.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/digit.curves.Rd -------------------------------------------------------------------------------- /man/digit.fixed.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/digit.fixed.Rd -------------------------------------------------------------------------------- /man/digitize2d.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/digitize2d.Rd -------------------------------------------------------------------------------- /man/digitsurface.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/digitsurface.Rd -------------------------------------------------------------------------------- /man/editTemplate.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/editTemplate.Rd -------------------------------------------------------------------------------- /man/estimate.missing.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/estimate.missing.Rd -------------------------------------------------------------------------------- /man/extended.pgls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/extended.pgls.Rd -------------------------------------------------------------------------------- /man/findMeanSpec.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/findMeanSpec.Rd -------------------------------------------------------------------------------- /man/fixed.angle.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/fixed.angle.Rd -------------------------------------------------------------------------------- /man/geomorph-package.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/geomorph-package.Rd -------------------------------------------------------------------------------- /man/geomorph.data.frame.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/geomorph.data.frame.Rd -------------------------------------------------------------------------------- /man/globalIntegration.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/globalIntegration.Rd -------------------------------------------------------------------------------- /man/gm.measurement.error.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/gm.measurement.error.Rd -------------------------------------------------------------------------------- /man/gm.prcomp.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/gm.prcomp.Rd -------------------------------------------------------------------------------- /man/gpagen.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/gpagen.Rd -------------------------------------------------------------------------------- /man/gridPar.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/gridPar.Rd -------------------------------------------------------------------------------- /man/hummingbirds.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/hummingbirds.Rd -------------------------------------------------------------------------------- /man/integration.Vrel.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/integration.Vrel.Rd -------------------------------------------------------------------------------- /man/integration.test.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/integration.test.Rd -------------------------------------------------------------------------------- /man/interlmkdist.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/interlmkdist.Rd -------------------------------------------------------------------------------- /man/larvalMorph.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/larvalMorph.Rd -------------------------------------------------------------------------------- /man/lizards.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/lizards.Rd -------------------------------------------------------------------------------- /man/make_ggplot.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/make_ggplot.Rd -------------------------------------------------------------------------------- /man/modularity.test.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/modularity.test.Rd -------------------------------------------------------------------------------- /man/morphol.disparity.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/morphol.disparity.Rd -------------------------------------------------------------------------------- /man/mosquito.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/mosquito.Rd -------------------------------------------------------------------------------- /man/mshape.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/mshape.Rd -------------------------------------------------------------------------------- /man/na.omit.geomorph.data.frame.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/na.omit.geomorph.data.frame.Rd -------------------------------------------------------------------------------- /man/phylo.integration.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/phylo.integration.Rd -------------------------------------------------------------------------------- /man/phylo.modularity.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/phylo.modularity.Rd -------------------------------------------------------------------------------- /man/physignal.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/physignal.Rd -------------------------------------------------------------------------------- /man/physignal.eigen.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/physignal.eigen.Rd -------------------------------------------------------------------------------- /man/physignal.z.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/physignal.z.Rd -------------------------------------------------------------------------------- /man/picknplot.shape.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/picknplot.shape.Rd -------------------------------------------------------------------------------- /man/plethShapeFood.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plethShapeFood.Rd -------------------------------------------------------------------------------- /man/plethodon.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plethodon.Rd -------------------------------------------------------------------------------- /man/plethspecies.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plethspecies.Rd -------------------------------------------------------------------------------- /man/plot.CR.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.CR.Rd -------------------------------------------------------------------------------- /man/plot.CR.phylo.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.CR.phylo.Rd -------------------------------------------------------------------------------- /man/plot.bilat.symmetry.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.bilat.symmetry.Rd -------------------------------------------------------------------------------- /man/plot.evolrate.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.evolrate.Rd -------------------------------------------------------------------------------- /man/plot.gm.prcomp.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.gm.prcomp.Rd -------------------------------------------------------------------------------- /man/plot.gpagen.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.gpagen.Rd -------------------------------------------------------------------------------- /man/plot.mshape.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.mshape.Rd -------------------------------------------------------------------------------- /man/plot.physignal.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.physignal.Rd -------------------------------------------------------------------------------- /man/plot.physignal.eigen.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.physignal.eigen.Rd -------------------------------------------------------------------------------- /man/plot.physignal.z.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.physignal.z.Rd -------------------------------------------------------------------------------- /man/plot.pls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.pls.Rd -------------------------------------------------------------------------------- /man/plot.procD.lm.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plot.procD.lm.Rd -------------------------------------------------------------------------------- /man/plotAllSpecimens.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plotAllSpecimens.Rd -------------------------------------------------------------------------------- /man/plotAllometry.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plotAllometry.Rd -------------------------------------------------------------------------------- /man/plotOutliers.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plotOutliers.Rd -------------------------------------------------------------------------------- /man/plotRefToTarget.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plotRefToTarget.Rd -------------------------------------------------------------------------------- /man/plotspec.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/plotspec.Rd -------------------------------------------------------------------------------- /man/print.CR.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.CR.Rd -------------------------------------------------------------------------------- /man/print.CR.phylo.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.CR.phylo.Rd -------------------------------------------------------------------------------- /man/print.bilat.symmetry.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.bilat.symmetry.Rd -------------------------------------------------------------------------------- /man/print.combined.set.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.combined.set.Rd -------------------------------------------------------------------------------- /man/print.compare.CR.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.compare.CR.Rd -------------------------------------------------------------------------------- /man/print.compare.ZVrel.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.compare.ZVrel.Rd -------------------------------------------------------------------------------- /man/print.compare.physignal.z.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.compare.physignal.z.Rd -------------------------------------------------------------------------------- /man/print.compare.pls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.compare.pls.Rd -------------------------------------------------------------------------------- /man/print.evolrate.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.evolrate.Rd -------------------------------------------------------------------------------- /man/print.evolrate1.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.evolrate1.Rd -------------------------------------------------------------------------------- /man/print.geomorphShapes.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.geomorphShapes.Rd -------------------------------------------------------------------------------- /man/print.gm.prcomp.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.gm.prcomp.Rd -------------------------------------------------------------------------------- /man/print.gpagen.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.gpagen.Rd -------------------------------------------------------------------------------- /man/print.morphol.disparity.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.morphol.disparity.Rd -------------------------------------------------------------------------------- /man/print.physignal.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.physignal.Rd -------------------------------------------------------------------------------- /man/print.physignal.eigen.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.physignal.eigen.Rd -------------------------------------------------------------------------------- /man/print.physignal.z.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.physignal.z.Rd -------------------------------------------------------------------------------- /man/print.pls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.pls.Rd -------------------------------------------------------------------------------- /man/print.procD.lm.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/print.procD.lm.Rd -------------------------------------------------------------------------------- /man/procD.lm.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/procD.lm.Rd -------------------------------------------------------------------------------- /man/procD.pgls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/procD.pgls.Rd -------------------------------------------------------------------------------- /man/pupfish.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/pupfish.Rd -------------------------------------------------------------------------------- /man/pupfish.ws.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/pupfish.ws.Rd -------------------------------------------------------------------------------- /man/ratland.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/ratland.Rd -------------------------------------------------------------------------------- /man/read.morphologika.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/read.morphologika.Rd -------------------------------------------------------------------------------- /man/read.ply.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/read.ply.Rd -------------------------------------------------------------------------------- /man/readland.fcsv.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/readland.fcsv.Rd -------------------------------------------------------------------------------- /man/readland.nts.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/readland.nts.Rd -------------------------------------------------------------------------------- /man/readland.shapes.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/readland.shapes.Rd -------------------------------------------------------------------------------- /man/readland.tps.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/readland.tps.Rd -------------------------------------------------------------------------------- /man/readmulti.nts.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/readmulti.nts.Rd -------------------------------------------------------------------------------- /man/readmulti.tps.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/readmulti.tps.Rd -------------------------------------------------------------------------------- /man/rotate.coords.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/rotate.coords.Rd -------------------------------------------------------------------------------- /man/scallopPLY.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/scallopPLY.Rd -------------------------------------------------------------------------------- /man/scallops.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/scallops.Rd -------------------------------------------------------------------------------- /man/shape.predictor.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/shape.predictor.Rd -------------------------------------------------------------------------------- /man/shapeHulls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/shapeHulls.Rd -------------------------------------------------------------------------------- /man/summary.CR.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.CR.Rd -------------------------------------------------------------------------------- /man/summary.CR.phylo.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.CR.phylo.Rd -------------------------------------------------------------------------------- /man/summary.bilat.symmetry.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.bilat.symmetry.Rd -------------------------------------------------------------------------------- /man/summary.combined.set.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.combined.set.Rd -------------------------------------------------------------------------------- /man/summary.compare.CR.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.compare.CR.Rd -------------------------------------------------------------------------------- /man/summary.compare.ZVrel.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.compare.ZVrel.Rd -------------------------------------------------------------------------------- /man/summary.compare.physignal.z.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.compare.physignal.z.Rd -------------------------------------------------------------------------------- /man/summary.compare.pls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.compare.pls.Rd -------------------------------------------------------------------------------- /man/summary.evolrate.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.evolrate.Rd -------------------------------------------------------------------------------- /man/summary.evolrate1.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.evolrate1.Rd -------------------------------------------------------------------------------- /man/summary.geomorphShapes.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.geomorphShapes.Rd -------------------------------------------------------------------------------- /man/summary.gm.prcomp.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.gm.prcomp.Rd -------------------------------------------------------------------------------- /man/summary.gpagen.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.gpagen.Rd -------------------------------------------------------------------------------- /man/summary.morphol.disparity.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.morphol.disparity.Rd -------------------------------------------------------------------------------- /man/summary.physignal.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.physignal.Rd -------------------------------------------------------------------------------- /man/summary.physignal.eigen.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.physignal.eigen.Rd -------------------------------------------------------------------------------- /man/summary.physignal.z.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.physignal.z.Rd -------------------------------------------------------------------------------- /man/summary.pls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.pls.Rd -------------------------------------------------------------------------------- /man/summary.procD.lm.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/summary.procD.lm.Rd -------------------------------------------------------------------------------- /man/two.b.pls.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/two.b.pls.Rd -------------------------------------------------------------------------------- /man/two.d.array.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/two.d.array.Rd -------------------------------------------------------------------------------- /man/warpRefMesh.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/warpRefMesh.Rd -------------------------------------------------------------------------------- /man/warpRefOutline.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/warpRefOutline.Rd -------------------------------------------------------------------------------- /man/writeland.tps.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/man/writeland.tps.Rd -------------------------------------------------------------------------------- /tests/testthat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/tests/testthat.R -------------------------------------------------------------------------------- /tests/testthat/test-geomorph.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/tests/testthat/test-geomorph.R -------------------------------------------------------------------------------- /vignettes/figs/PCAplot2D.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/vignettes/figs/PCAplot2D.png -------------------------------------------------------------------------------- /vignettes/figs/example_spec2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/vignettes/figs/example_spec2.png -------------------------------------------------------------------------------- /vignettes/figs/example_template.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/vignettes/figs/example_template.png -------------------------------------------------------------------------------- /vignettes/figs/fixed.3D.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/vignettes/figs/fixed.3D.png -------------------------------------------------------------------------------- /vignettes/figs/tree.plot.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/vignettes/figs/tree.plot.png -------------------------------------------------------------------------------- /vignettes/geomorph.digitize3D.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/geomorphR/geomorph/HEAD/vignettes/geomorph.digitize3D.Rmd --------------------------------------------------------------------------------