├── .Rbuildignore ├── .github ├── .gitignore └── workflows │ ├── R-CMD-check.yaml │ ├── pkgdown.yaml │ └── test-coverage.yaml ├── .gitignore ├── DESCRIPTION ├── LICENSE ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── additions.R ├── data.R ├── ggseg3d-package.R ├── ggseg3d.R ├── ggseg3d_atlas.R ├── old │ ├── atlas_info.R │ └── get_paletteer.R ├── sysdata.rda └── utils.R ├── README.Rmd ├── README.md ├── _pkgdown.yml ├── codecov.yml ├── data-raw ├── make_atlases.R ├── old │ ├── add_pos_2data.R │ ├── aseg_add_labels.R │ ├── get_surface.R │ ├── make_cortex_mesh.R │ ├── mesh3d │ │ ├── aseg.zip │ │ ├── aseg │ │ │ ├── annot2filename.csv │ │ │ ├── aseg_004.ply │ │ │ ├── aseg_005.ply │ │ │ ├── aseg_007.ply │ │ │ ├── aseg_008.ply │ │ │ ├── aseg_010.ply │ │ │ ├── aseg_011.ply │ │ │ ├── aseg_012.ply │ │ │ ├── aseg_013.ply │ │ │ ├── aseg_014.ply │ │ │ ├── aseg_015.ply │ │ │ ├── aseg_016.ply │ │ │ ├── aseg_017.ply │ │ │ ├── aseg_018.ply │ │ │ ├── aseg_026.ply │ │ │ ├── aseg_028.ply │ │ │ ├── aseg_043.ply │ │ │ ├── aseg_044.ply │ │ │ ├── aseg_046.ply │ │ │ ├── aseg_047.ply │ │ │ ├── aseg_049.ply │ │ │ ├── aseg_050.ply │ │ │ ├── aseg_051.ply │ │ │ ├── aseg_052.ply │ │ │ ├── aseg_053.ply │ │ │ ├── aseg_054.ply │ │ │ ├── aseg_058.ply │ │ │ ├── aseg_060.ply │ │ │ ├── aseg_251.ply │ │ │ ├── aseg_252.ply │ │ │ ├── aseg_253.ply │ │ │ ├── aseg_254.ply │ │ │ └── aseg_255.ply │ │ ├── dk.zip │ │ ├── ggseg3dLCBC.zip │ │ ├── glassbrain.zip │ │ ├── glassbrain │ │ │ ├── lh.cortex.LCBC.fsaverage5.zip │ │ │ ├── lh.cortex.LCBC.fsaverage5 │ │ │ │ ├── annot2filename.csv │ │ │ │ ├── lh.LCBC_roi.0001.ply │ │ │ │ ├── lh.LCBC_roi.0002.ply │ │ │ │ └── lh.cortex.annot.ply │ │ │ ├── rh.cortex.LCBC.fsaverage5.zip │ │ │ └── rh.cortex.LCBC.fsaverage5 │ │ │ │ ├── annot2filename.csv │ │ │ │ ├── rh.LCBC_roi.0001.ply │ │ │ │ ├── rh.LCBC_roi.0002.ply │ │ │ │ └── rh.cortex.annot.ply │ │ └── order_files.sh │ ├── mesh3d_create.R │ └── palettes.R └── sysdata.R ├── data ├── aseg_3d.rda └── dk_3d.rda ├── ggseg3d.Rproj ├── inst ├── CITATION ├── WORDLIST ├── logo.png ├── logo.svg ├── sh │ └── fsaverage5_2ascii.sh ├── sticker.png └── templates │ ├── lh.aparc.annot │ └── rh.aparc.annot ├── man ├── add_glassbrain.Rd ├── aseg_3d.Rd ├── dk_3d.Rd ├── figures │ └── logo.png ├── ggseg3d.Rd ├── ggseg3d_atlas-class.Rd ├── img │ ├── README-aseg_3d-plot.png │ ├── README-dk_3d-plot.png │ ├── README-unnamed-chunk-4-1.png │ ├── README-unnamed-chunk-5-1.png │ ├── README-unnamed-chunk-7-1.png │ └── ggbrain.svg ├── is_ggseg3d_atlas.Rd ├── pan_camera.Rd └── remove_axes.Rd ├── pkgdown └── favicon │ ├── apple-touch-icon-120x120.png │ ├── apple-touch-icon-152x152.png │ ├── apple-touch-icon-180x180.png │ ├── apple-touch-icon-60x60.png │ ├── apple-touch-icon-76x76.png │ ├── apple-touch-icon.png │ ├── favicon-16x16.png │ ├── favicon-32x32.png │ └── favicon.ico ├── tests ├── spelling.R ├── testthat.R └── testthat │ ├── img │ └── single │ │ ├── 0000_trans.png │ │ ├── 0001_trans.png │ │ ├── 0002_trans.png │ │ ├── 0003_trans.png │ │ ├── 0004_trans.png │ │ ├── 0005_trans.png │ │ ├── 0006_trans.png │ │ ├── 0007_trans.png │ │ ├── 0008_trans.png │ │ ├── 0009_trans.png │ │ ├── 0010_trans.png │ │ ├── 0011_trans.png │ │ ├── 0012_trans.png │ │ ├── 0013_trans.png │ │ ├── 0014_trans.png │ │ ├── 0015_trans.png │ │ ├── 0016_trans.png │ │ ├── 0017_trans.png │ │ ├── 0018_trans.png │ │ ├── 0019_trans.png │ │ ├── 0020_trans.png │ │ ├── 0021_trans.png │ │ ├── 0022_trans.png │ │ ├── 0023_trans.png │ │ ├── 0024_trans.png │ │ ├── 0025_trans.png │ │ ├── 0026_trans.png │ │ ├── 0027_trans.png │ │ ├── 0028_trans.png │ │ ├── 0029_trans.png │ │ ├── 0030_trans.png │ │ ├── 0031_trans.png │ │ ├── 0032_trans.png │ │ ├── 0033_trans.png │ │ ├── 0034_trans.png │ │ ├── 0035_trans.png │ │ ├── 0036_trans.png │ │ ├── 0037_trans.png │ │ ├── 0038_trans.png │ │ └── 0039_trans.png │ ├── old │ └── test-get_paletteer.R │ ├── setup.R │ ├── test-axes.R │ ├── test-camera.R │ ├── test-data_merge.R │ ├── test-ggseg3d.R │ ├── 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