├── MATLAB ├── BNN │ ├── H_kernel.m │ ├── I_kernel.m │ ├── NN_model.m │ ├── NN_model_fast.m │ ├── NN_model_setup.m │ ├── SVGD_I.m │ ├── SVN_CG_blockdiag.m │ ├── bnnMAP.fig │ ├── bnnMAP.pdf │ ├── bnnmaperror.fig │ ├── bnnmaperror.pdf │ ├── data_sets │ │ ├── data.mat │ │ └── readme.m │ ├── eigen_PPJtJ.m │ ├── fminunc_2018a.m │ ├── get_map.m │ ├── grad_mlpt.m │ ├── hmala.m │ ├── line_search.m │ ├── load_data.m │ ├── matvec_Fisher.m │ ├── matvec_Hx.m │ ├── matvec_Hx_blockdiag.m │ ├── matvec_Jty.m │ ├── matvec_Jty_safe.m │ ├── matvec_Jx.m │ ├── mcmc_input.m │ ├── minus_log_post.m │ ├── minus_log_post2.m │ ├── minus_log_post_fast.m │ ├── newton_cg.m │ ├── newton_cg_blockdiag.m │ ├── rand_svd_J.m │ ├── scale_cols.m │ ├── setup.m │ ├── setup_year_pred.m │ ├── stein_BNN.asv │ ├── stein_BNN.m │ └── validate.m ├── conditional_diffusion │ ├── SVGD_H.m │ ├── SVGD_I.m │ ├── SVN_H.m │ ├── SVN_I.m │ ├── cd_model │ │ ├── cov_Ltv.m │ │ ├── cov_Lv.m │ │ ├── cov_invLtu.m │ │ ├── cov_invLu.m │ │ ├── euler_solve.m │ │ ├── explicit_J.m │ │ ├── forward_solve.m │ │ ├── make_prior.m │ │ ├── matvec_Jty.m │ │ └── matvec_Jx.m │ ├── grad_mllkd.m │ ├── grad_mlpt.m │ ├── iact.m │ ├── load_dir.m │ ├── model_setup.mat │ ├── plot_setup.m │ ├── run_dili_lis.m │ └── script_cond_diff.m ├── double_banana │ ├── SVNCG_H.m │ ├── forward_solve.m │ ├── kernel_full.m │ ├── load_dir_double_banana.m │ ├── matvec_HJ_x.m │ ├── matvec_HJbd_x.m │ ├── matvec_Hpost_x.m │ ├── newtonCG.m │ ├── script_double_banana.m │ ├── script_newton_comparisons.m │ └── setup.m ├── fastfins │ ├── Contents.m │ ├── GP_snr10_data.mat │ ├── PDEs │ │ ├── heat │ │ │ └── heat_make_FEM.m │ │ └── reaction_diffsion │ │ │ ├── RD_make_FEM.m │ │ │ ├── RD_make_FEM_T1.m │ │ │ ├── RD_make_outputs.m │ │ │ ├── RD_matvec_Jty.m │ │ │ ├── RD_matvec_Jx.m │ │ │ ├── RD_solve.m │ │ │ └── core │ │ │ ├── dGds.m │ │ │ ├── eval_G.m │ │ │ └── make_precond.m │ ├── docs │ │ ├── note_parameter.m │ │ ├── note_prior.m │ │ ├── note_solver.m │ │ └── note_solver_old.m │ ├── initialize.m │ ├── initialize_prior.m │ ├── library │ │ ├── CalculateESS.m │ │ ├── SubAxis │ │ │ ├── parseArgs.m │ │ │ └── subaxis.m │ │ ├── deim.m │ │ ├── deim_fast.m │ │ ├── figure_default.m │ │ ├── fminunc.m │ │ ├── fminunc_2014b.m │ │ ├── fminunc_2016b.m │ │ ├── freezeColors_v23 │ │ │ ├── freezeColors │ │ │ │ ├── Contents.m │ │ │ │ ├── demo │ │ │ │ │ └── html │ │ │ │ │ │ ├── freezeColors_pub.html │ │ │ │ │ │ ├── freezeColors_pub.png │ │ │ │ │ │ ├── freezeColors_pub_01.png │ │ │ │ │ │ └── freezeColors_pub_02.png │ │ │ │ ├── freezeColors.m │ │ │ │ ├── test │ │ │ │ │ └── test_main.m │ │ │ │ └── unfreezeColors.m │ │ │ └── license.txt │ │ ├── invPow.m │ │ ├── iter_svd.m │ │ ├── iter_svd_init.m │ │ ├── iterative_svd.m~ │ │ ├── lognormal_cov.m │ │ ├── logtrnormal_cov.m │ │ ├── plot_energy.m │ │ ├── qr_svd.m │ │ ├── scale_cols.m │ │ ├── scale_rows.m │ │ ├── sparsePCA.m │ │ ├── spchol2inv.m │ │ ├── subtightplot.m │ │ ├── triangle_func.m │ │ └── uniform_func.m │ ├── load_dir.m │ ├── mesh_2d │ │ ├── build_map.m │ │ ├── make_local.m │ │ └── rectmesh2d.m │ ├── optimizer │ │ ├── MAP.m │ │ ├── iter_info.m │ │ ├── line_search.m │ │ ├── newton_cg.m │ │ ├── opt.m │ │ ├── test_MAP.m │ │ ├── test_opt.m │ │ ├── trust_region.m │ │ └── two_loops.m │ ├── prior │ │ ├── build_bimap.m │ │ ├── build_collocated_KL.m │ │ ├── build_map.m │ │ ├── cov_Cv.m │ │ ├── cov_Ltv.m │ │ ├── cov_Lv.m │ │ ├── cov_eig.m │ │ ├── cov_invLtu.m │ │ ├── cov_invLu.m │ │ ├── init_prior_dist.m │ │ ├── load_test_image.m │ │ ├── make_prior_GP.m │ │ ├── make_prior_KL.m │ │ ├── make_prior_MRF.m │ │ ├── make_prior_MRF_old.m │ │ ├── update_MRF.m │ │ └── upscale_KL.m │ └── solvers │ │ ├── eigen_PPGNH.m │ │ ├── eigen_PPJtJ.m │ │ ├── get_map_matlab.m │ │ ├── matvec_PPGNH.m │ │ ├── minus_log_post.m │ │ ├── prior_solvers │ │ ├── basis_KL.m │ │ ├── basis_LIS.m │ │ ├── matvec_prior_L.m │ │ ├── matvec_prior_Lt.m │ │ ├── matvec_prior_invL.m │ │ ├── matvec_prior_invLt.m │ │ ├── minus_log_prior.m │ │ ├── pre_process.m │ │ ├── prior_random.m │ │ └── u2x.m │ │ ├── svd_explicit_J.m │ │ ├── svd_explicit_WJ.m │ │ ├── svd_rand_J.m │ │ └── svd_rand_WJ.m ├── library │ ├── grad_mllkd.m │ ├── grad_mlpt.m │ ├── minus_log_post.m │ └── post2contour.m ├── nonlin_regression │ ├── SVNCG_H.m │ ├── forward_solve.m │ ├── kernel_full.m │ ├── load_dir_nonlinregr.m │ ├── matvec_HJ_x.m │ ├── matvec_HJbd_x.m │ ├── matvec_Hpost_x.m │ ├── newtonCG.m │ ├── script_nonlinregr.m │ └── setup.m └── samplers │ └── stein │ ├── SVGD_H.m │ ├── SVGD_I.m │ ├── SVN_H.m │ ├── SVN_I.m │ └── SVNfull_H.m ├── NIPS2018poster └── NeurIPS2018Poster.pdf ├── README.md └── python ├── SVN ├── SVN_2D_test_cases.ipynb └── SVN_4d_kinematic_test_case.ipynb └── SVOCD ├── BOCPDviaSMC_Hawkes_WannaCry.py ├── BOCPDviaSMC_LSTM_Bitcoin.py ├── LSTM_M2M.py ├── SVOCD_Hawkes_WannaCry.py ├── SVOCD_LSTM_Bitcoin.py ├── bitcoin_price.txt └── wannacry_SMB2 /MATLAB/BNN/H_kernel.m: 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