├── .dockerignore ├── .gitignore ├── Dockerfiles ├── cuda7.0 │ └── Dockerfile └── cuda8.0 │ └── Dockerfile ├── LICENSE ├── README.md ├── common_defs.py ├── embedH5.py ├── example ├── model.py ├── test.fa ├── test.target ├── train.fa ├── train.target ├── valid.fa └── valid.target ├── hyperband.py └── main.py /.dockerignore: -------------------------------------------------------------------------------- 1 | combine* 2 | -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/.gitignore -------------------------------------------------------------------------------- /Dockerfiles/cuda7.0/Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/Dockerfiles/cuda7.0/Dockerfile -------------------------------------------------------------------------------- /Dockerfiles/cuda8.0/Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/Dockerfiles/cuda8.0/Dockerfile -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/README.md -------------------------------------------------------------------------------- /common_defs.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/common_defs.py -------------------------------------------------------------------------------- /embedH5.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/embedH5.py -------------------------------------------------------------------------------- /example/model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/example/model.py -------------------------------------------------------------------------------- /example/test.fa: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/example/test.fa -------------------------------------------------------------------------------- /example/test.target: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/example/test.target -------------------------------------------------------------------------------- /example/train.fa: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/example/train.fa -------------------------------------------------------------------------------- /example/train.target: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/example/train.target -------------------------------------------------------------------------------- /example/valid.fa: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/example/valid.fa -------------------------------------------------------------------------------- /example/valid.target: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/example/valid.target -------------------------------------------------------------------------------- /hyperband.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/hyperband.py -------------------------------------------------------------------------------- /main.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/gifford-lab/Keras-genomics/HEAD/main.py --------------------------------------------------------------------------------