├── .gitignore ├── CONTRIBUTING.md ├── LICENSE ├── README.md ├── experimental ├── contextual_integrator_rnn_tutorial │ ├── __init__.py │ ├── integrator.py │ ├── rnn.py │ └── utils.py ├── lfads_cc │ ├── distributions.py │ ├── lfads.py │ ├── optimize.py │ ├── plotting.py │ └── utils.py ├── lfads_gmm │ ├── __init__.py │ ├── distributions.py │ ├── lfads.py │ ├── optimize.py │ ├── plotting.py │ └── utils.py └── notebooks │ ├── Contextual Integration RNN Tutorial.ipynb │ ├── JSLDS_for_CTD.ipynb │ ├── LFADS CC Tutorial.ipynb │ ├── LFADS GMM Tutorial.ipynb │ └── Sequence_to_sequence_attn_and_h0_encodings.ipynb ├── fixed_point_finder ├── __init__.py ├── decision.py ├── fixed_points.py ├── rnn.py └── utils.py ├── images ├── FORCE_banner.png ├── lfads_architecture_w_inferred_inputs_3.pdf └── lfads_architecture_w_inferred_inputs_3.png ├── integrator_rnn_tutorial ├── __init__.py ├── integrator.py ├── rnn.py └── utils.py ├── lfads_tutorial ├── __init__.py ├── distributions.py ├── lfads.py ├── optimize.py ├── plotting.py └── utils.py └── notebooks ├── FORCE_Learning_in_JAX.ipynb ├── Fixed Point Finder Tutorial.ipynb ├── Integrator RNN Tutorial.ipynb ├── LFADS Tutorial.ipynb └── toy_model_for_context_ICML_2020.ipynb /.gitignore: -------------------------------------------------------------------------------- 1 | # Matlab autosave 2 | *~ 3 | *.pyc 4 | site 5 | *.ipynb_checkpoints 6 | .DS_Store -------------------------------------------------------------------------------- /CONTRIBUTING.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/google-research/computation-thru-dynamics/HEAD/CONTRIBUTING.md -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/google-research/computation-thru-dynamics/HEAD/LICENSE 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