├── Code_NCOMMS ├── Matlab │ ├── BrainGraphTools │ │ ├── Glasser360_2mm_codebook.mat │ │ ├── HCP-MMP1_onMNI152_2mm_Glasser360.nii │ │ ├── PlotBrainGraph.m │ │ ├── cylinder2P.m │ │ ├── fread3.m │ │ ├── freezeColors.m │ │ ├── process_options.m │ │ ├── read_surf.m │ │ ├── show_FSmesh.m │ │ ├── show_cm.m │ │ ├── show_cm_extended.m │ │ └── whereAmIRunning.m │ ├── GSP_FullPipeline.m │ ├── GSP_Laplacian.m │ ├── GS_FC.m │ ├── GSanalysis.m │ ├── GSrandomozation_create_SCignorant_surrogates.m │ ├── GSrandomozation_create_SCinformed_surrogates.m │ ├── Neurosynth_createmaps.m │ ├── Neurosynth_inputs.m │ ├── PlotGraph.m │ ├── SDI_SCignorant_surrogates.m │ ├── SDI_SCinformed_surrogates.m │ ├── cnm │ │ ├── angular_dist.m │ │ ├── avgClusteringCoefficient.m │ │ ├── ba_net.m │ │ ├── characteristicPathLength.m │ │ ├── cm_net.m │ │ ├── er_net.m │ │ ├── h2_net.m │ │ ├── hyperbolic_dist.m │ │ ├── matToGML.m │ │ ├── plotNodeDegreeDistrib.m │ │ ├── ps_net.m │ │ ├── rand_graph.m │ │ ├── randp.m │ │ └── sw_net.m │ ├── data │ │ ├── SC_avg56.mat │ │ └── X_RS_10subjects.mat │ └── percentile.m └── Python │ ├── .ipynb_checkpoints │ └── 05_metaanalysis_neurosynth_myanalysis-checkpoint.ipynb │ ├── 05_metaanalysis_neurosynth_myanalysis.ipynb │ ├── database_feb_2015 │ ├── database.txt.zip │ ├── features.txt.zip │ ├── v3-topics-50-keys.txt │ └── v3-topics-50.txt │ └── my_masks │ ├── 56subjs_SDI_01.nii │ ├── 56subjs_SDI_02.nii │ ├── 56subjs_SDI_03.nii │ ├── 56subjs_SDI_04.nii │ ├── 56subjs_SDI_05.nii │ ├── 56subjs_SDI_06.nii │ ├── 56subjs_SDI_07.nii │ ├── 56subjs_SDI_08.nii │ ├── 56subjs_SDI_09.nii │ ├── 56subjs_SDI_10.nii │ ├── 56subjs_SDI_11.nii │ ├── 56subjs_SDI_12.nii │ ├── 56subjs_SDI_13.nii │ ├── 56subjs_SDI_14.nii │ ├── 56subjs_SDI_15.nii │ ├── 56subjs_SDI_16.nii │ ├── 56subjs_SDI_17.nii │ ├── 56subjs_SDI_18.nii │ ├── 56subjs_SDI_19.nii │ └── 56subjs_SDI_20.nii ├── HCP_Subjescts.txt ├── LICENSE └── README.md /Code_NCOMMS/Matlab/BrainGraphTools/Glasser360_2mm_codebook.mat: 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