├── BLAST_Parser_result_check_finish.pl ├── BLASTn_NT_parser.pl.sqlite ├── BLASTn_VIRUSDB_parser.pl.sqlite ├── BLASTx_NR_parser.pl.sqlite ├── BLASTx_VIRUSDB_parser.pl.sqlite ├── Combine_joined_unjoin_reads.pl ├── Eukaryotic_virus_Generate_report_All_Samples.pl ├── FASTA_file_split_given_numberOfFiles.pl ├── FASTQ_PE_file_split.pl ├── FASTQ_SE_file_split.pl ├── FASTQ_to_FASTA.pl ├── FASTQ_to_FASTA_after_BWA.pl ├── Generate_assignment_report.pl ├── Generate_assignment_summary.pl ├── Get_SimilarSequence_DefinedBy_CD_HIT.pl ├── LICENSE ├── Masked_seq_to_unmasked_seq.pl ├── MegaBLAST_HG_parser.pl ├── MegaBLAST_NT_parser.pl.sqlite ├── Phage_Generate_assignment_report.pl ├── Phage_Generate_assignment_summary.pl ├── Phage_Generate_report_All_Samples.pl ├── README.md ├── README.txt ├── RepeatMasker_SequenceQualityControl.pl ├── RepeatMasker_check_SequenceQualityControl.pl ├── Solexa_get_originalSeq_given_fasta.pl ├── Tantan_Sequence_Quality_Control.pl ├── Unmasked_seq_to_masked_seq.pl ├── Unmasked_seq_to_masked_seq_After_BacteriaMapping.pl ├── VirusSeeker_Virome_run.pl ├── VirusSeeker_Virome_v0.063_cdhit984.pl ├── check_BLASTN_VIRUSDB_Finished_correctly.pl ├── check_BLASTX_NR_Finished_correctly.pl ├── check_BLASTX_VIRUSDB_Finished_correctly.pl ├── check_BLAST_NT_Finished_correctly.pl ├── check_Blast_parsed_file.pl ├── check_MegaBLAST_HOST_Finished_correctly.pl ├── check_MegaBLAST_NT_Finished_correctly.pl ├── check_split_BLASTN_VIRUSDB.pl ├── check_split_BLASTX_VIRUSDB.pl ├── check_split_BN.pl ├── check_split_BX.pl ├── check_split_MegaBLAST_NT.pl └── check_split_RepeatMasker.pl /BLAST_Parser_result_check_finish.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/guoyanzhao/VirusSeeker-Virome/HEAD/BLAST_Parser_result_check_finish.pl -------------------------------------------------------------------------------- /BLASTn_NT_parser.pl.sqlite: 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