├── LICENSE ├── README.md ├── add_internal_node_labels.pl ├── extract_dollop_output_sequences_v2-fast.pl ├── orthomcl_groups_analysis.pl ├── plot_tree_gains_loss_in_R.r └── redundancy_check.pl /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/guyleonard/orthomcl_tools/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/guyleonard/orthomcl_tools/HEAD/README.md -------------------------------------------------------------------------------- /add_internal_node_labels.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/guyleonard/orthomcl_tools/HEAD/add_internal_node_labels.pl -------------------------------------------------------------------------------- /extract_dollop_output_sequences_v2-fast.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/guyleonard/orthomcl_tools/HEAD/extract_dollop_output_sequences_v2-fast.pl -------------------------------------------------------------------------------- /orthomcl_groups_analysis.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/guyleonard/orthomcl_tools/HEAD/orthomcl_groups_analysis.pl -------------------------------------------------------------------------------- /plot_tree_gains_loss_in_R.r: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/guyleonard/orthomcl_tools/HEAD/plot_tree_gains_loss_in_R.r -------------------------------------------------------------------------------- /redundancy_check.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/guyleonard/orthomcl_tools/HEAD/redundancy_check.pl --------------------------------------------------------------------------------