├── .gitignore ├── Dockerfile ├── LICENSE ├── README.md ├── src ├── data │ ├── __init__.py │ ├── aligned_dataset.py │ ├── base_dataset.py │ ├── han_aligned_dataset.py │ ├── image_folder.py │ ├── single_dataset.py │ ├── stack_aligned_dataset.py │ ├── template_dataset.py │ └── unaligned_dataset.py ├── datasets │ ├── combine_A_and_B.py │ └── make_dataset_aligned.py ├── models │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-38.pyc │ │ ├── __init__.cpython-39.pyc │ │ ├── base_model.cpython-38.pyc │ │ ├── base_model.cpython-39.pyc │ │ ├── edge_loss.cpython-38.pyc │ │ ├── edge_loss.cpython-39.pyc │ │ ├── han_networks.cpython-38.pyc │ │ ├── han_networks.cpython-39.pyc │ │ ├── han_networks_spie.cpython-38.pyc │ │ ├── han_pix2pix_model.cpython-38.pyc │ │ ├── han_pix2pix_model.cpython-39.pyc │ │ ├── han_pix2pix_spie_model.cpython-38.pyc │ │ ├── networks.cpython-38.pyc │ │ ├── networks.cpython-39.pyc │ │ ├── pix2pix_model.cpython-38.pyc │ │ ├── stack_pix2pix_model.cpython-38.pyc │ │ └── test_model.cpython-39.pyc │ ├── base_model.py │ ├── colorization_model.py │ ├── cycle_gan_model.py │ ├── edge_loss.py │ ├── han_networks.py │ ├── han_networks_spie.py │ ├── han_pix2pix_model.py │ ├── han_pix2pix_spie_model.py │ ├── networks.py │ ├── pix2pix_model.py │ ├── stack_pix2pix_model.py │ ├── template_model.py │ └── test_model.py ├── options │ ├── __init__.py │ ├── base_options.py │ ├── test_options.py │ └── train_options.py ├── requirements.txt ├── run_inference.py ├── train.py ├── util │ ├── __init__.py │ ├── __init__.pyc │ ├── __pycache__ │ │ ├── __init__.cpython-38.pyc │ │ ├── __init__.cpython-39.pyc │ │ ├── html.cpython-38.pyc │ │ ├── html.cpython-39.pyc │ │ ├── util.cpython-38.pyc │ │ ├── util.cpython-39.pyc │ │ ├── visualizer.cpython-38.pyc │ │ └── visualizer.cpython-39.pyc │ ├── get_data.py │ ├── html.py │ ├── image_pool.py │ ├── util.py │ ├── util.pyc │ └── visualizer.py └── utility.py └── vis.png /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/.gitignore -------------------------------------------------------------------------------- /Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/Dockerfile -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/README.md -------------------------------------------------------------------------------- /src/data/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/data/__init__.py -------------------------------------------------------------------------------- /src/data/aligned_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/data/aligned_dataset.py -------------------------------------------------------------------------------- /src/data/base_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/data/base_dataset.py -------------------------------------------------------------------------------- /src/data/han_aligned_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/data/han_aligned_dataset.py -------------------------------------------------------------------------------- /src/data/image_folder.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/data/image_folder.py -------------------------------------------------------------------------------- /src/data/single_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/data/single_dataset.py -------------------------------------------------------------------------------- /src/data/stack_aligned_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/data/stack_aligned_dataset.py -------------------------------------------------------------------------------- /src/data/template_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/data/template_dataset.py -------------------------------------------------------------------------------- /src/data/unaligned_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/data/unaligned_dataset.py -------------------------------------------------------------------------------- /src/datasets/combine_A_and_B.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/datasets/combine_A_and_B.py -------------------------------------------------------------------------------- /src/datasets/make_dataset_aligned.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/datasets/make_dataset_aligned.py -------------------------------------------------------------------------------- /src/models/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__init__.py -------------------------------------------------------------------------------- /src/models/__pycache__/__init__.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/__init__.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/__init__.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/__init__.cpython-39.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/base_model.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/base_model.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/base_model.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/base_model.cpython-39.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/edge_loss.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/edge_loss.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/edge_loss.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/edge_loss.cpython-39.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/han_networks.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/han_networks.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/han_networks.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/han_networks.cpython-39.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/han_networks_spie.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/han_networks_spie.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/han_pix2pix_model.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/han_pix2pix_model.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/han_pix2pix_model.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/han_pix2pix_model.cpython-39.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/han_pix2pix_spie_model.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/han_pix2pix_spie_model.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/networks.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/networks.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/networks.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/networks.cpython-39.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/pix2pix_model.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/pix2pix_model.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/stack_pix2pix_model.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/stack_pix2pix_model.cpython-38.pyc -------------------------------------------------------------------------------- /src/models/__pycache__/test_model.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/__pycache__/test_model.cpython-39.pyc -------------------------------------------------------------------------------- /src/models/base_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/base_model.py -------------------------------------------------------------------------------- /src/models/colorization_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/colorization_model.py -------------------------------------------------------------------------------- /src/models/cycle_gan_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/cycle_gan_model.py -------------------------------------------------------------------------------- /src/models/edge_loss.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/edge_loss.py -------------------------------------------------------------------------------- /src/models/han_networks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/han_networks.py -------------------------------------------------------------------------------- /src/models/han_networks_spie.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/han_networks_spie.py -------------------------------------------------------------------------------- /src/models/han_pix2pix_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/han_pix2pix_model.py -------------------------------------------------------------------------------- /src/models/han_pix2pix_spie_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/han_pix2pix_spie_model.py -------------------------------------------------------------------------------- /src/models/networks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/networks.py -------------------------------------------------------------------------------- /src/models/pix2pix_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/pix2pix_model.py -------------------------------------------------------------------------------- /src/models/stack_pix2pix_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/stack_pix2pix_model.py -------------------------------------------------------------------------------- /src/models/template_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/template_model.py -------------------------------------------------------------------------------- /src/models/test_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/models/test_model.py -------------------------------------------------------------------------------- /src/options/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/options/__init__.py -------------------------------------------------------------------------------- /src/options/base_options.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/options/base_options.py -------------------------------------------------------------------------------- /src/options/test_options.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/options/test_options.py -------------------------------------------------------------------------------- /src/options/train_options.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/options/train_options.py -------------------------------------------------------------------------------- /src/requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/requirements.txt -------------------------------------------------------------------------------- /src/run_inference.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/run_inference.py -------------------------------------------------------------------------------- /src/train.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/train.py -------------------------------------------------------------------------------- /src/util/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__init__.py -------------------------------------------------------------------------------- /src/util/__init__.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__init__.pyc -------------------------------------------------------------------------------- /src/util/__pycache__/__init__.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__pycache__/__init__.cpython-38.pyc -------------------------------------------------------------------------------- /src/util/__pycache__/__init__.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__pycache__/__init__.cpython-39.pyc -------------------------------------------------------------------------------- /src/util/__pycache__/html.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__pycache__/html.cpython-38.pyc -------------------------------------------------------------------------------- /src/util/__pycache__/html.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__pycache__/html.cpython-39.pyc -------------------------------------------------------------------------------- /src/util/__pycache__/util.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__pycache__/util.cpython-38.pyc -------------------------------------------------------------------------------- /src/util/__pycache__/util.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__pycache__/util.cpython-39.pyc -------------------------------------------------------------------------------- /src/util/__pycache__/visualizer.cpython-38.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__pycache__/visualizer.cpython-38.pyc -------------------------------------------------------------------------------- /src/util/__pycache__/visualizer.cpython-39.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/__pycache__/visualizer.cpython-39.pyc -------------------------------------------------------------------------------- /src/util/get_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/get_data.py -------------------------------------------------------------------------------- /src/util/html.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/html.py -------------------------------------------------------------------------------- /src/util/image_pool.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/image_pool.py -------------------------------------------------------------------------------- /src/util/util.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/util.py -------------------------------------------------------------------------------- /src/util/util.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/util.pyc -------------------------------------------------------------------------------- /src/util/visualizer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/util/visualizer.py -------------------------------------------------------------------------------- /src/utility.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/src/utility.py -------------------------------------------------------------------------------- /vis.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/han-liu/SynCT_TcMRgFUS/HEAD/vis.png --------------------------------------------------------------------------------